Contig Data
morexGenes
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Map Locations of contig_1593715 (2931 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1593715

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21226 2 1979 bp MLOC_21226.1 Available Available LOC_Os01g12730.1, FRAME:-2, EVALUE:3e-24, 13101.m01386 protein ras-related protein, putative, expressed





CDS Structure of MLOC_21226






Contig Sequence (2931 bp)

>contig_1593715 2931 assembly3_WGSMorex_rbca.fasta
TTTTTGAGAAAACGCAAAAGCCTTGCGTTTCTTTGCATTGAAAAGGGGGATAGTACAGGC
TCCGAAGAGGAAGTTACAGCGTTTAGTCAAGATTATTATCTGTACTTGATTCAGTCCATT
TCATCTTAGGAAAGCATCTAATGTTAGCAACTGGTACTCACAGCCATCAGATAAGTTGTA
ACTGTAAATCAAGTCAAATAGCTAAAATCAAATAAAGCAGCATACCAGGTTTTTTGTTTT
TGAACAGGCATACCAAGTACATAGGTTGCTATTGTATAACTAAAAAGACAGCTGTCTCCA
AAAATATAATTTGTTTATGTTTATTCAAATAAACTATTCCGCGGGGATAAAAAGATACAA
TGTCTGAACCTCAGGTATAGGTACAAATGAAATGTTTAGCTATCTCATATGGCCATATCC
TTGATTTAAATATGATGGATGAGAGATGGACCATAGAAAATGCACCTGAACAGGCTGTTT
CATGCCTGTCATGTTAAATAGAAAAGATGGCAGGGTCCCTGAACGTTCAATACTCTAGTC
CAGATTTAAGAAAGTTTGAGTGCCAGCAGATAACAGCTCAACAGAGTAGTTCATTCCCAG
TCATAAGAATCTGAAATTCTTAGTGCTAACGAAAGCAAGCAAGTCTGTACATGGTCCATA
AAGTTCGAGTAATAGTGCCTATGTGTTCATCAATTTATGACAATCAGAGTACTGGAGGAT
TGGGGCTCATCAATTATACTATATGTAACAGAGTAACAGAAATAGATGCCAAAAGATAAA
AAAGGATAGGACCGGCTGCTACAGTATAAGCAACACATAATCAAGTTTTTCCCTGACCCC
TTTTTTTGGCTGACATCGCATAGCTTTTTATTAGTAACTCACGTTAGTGAAGCCATAGCT
TTGCAAGAGTACTGTTTCTCTGGAATTGGACAGATTTTATTTTTGTTTGTTCATGCATAT
AGTGTTGGGCCACTGGAATTGTTTGACAACTTTCTTTCTGTCTTAATGCACTGACATGCA
ATTCCCCTGCATGGTCTCTAATTATTATGTTTCGCTCTGGACTAGGTCTCAGTCATCTAA
CCCTTGTGAAATTGTAATACAGAGGTAGTGCAAACCAAGCGGACTACTGAACTAGAGCTG
AAATGCTGAACTGATGTGATTTCTTATATGACATAATGTGCCTTTCAAATTGGGTGAGCA
AAAATCTACCGCAAAAAAAAAACGACCATCTGTAATCGCATTAACCTATCCAATAAGCAT
CTACCAACAGGATGTTTGCAAAAGTACACAACTCTATATAAACAAAAAATGTCGCTTATG
TTGACCAGAGTAACTCATGAACCAAACATCTTCAGCCTGTCATAAACAAACTGCAAGTTT
AGTACCACTAAACTCGATCATCATCGAACCTACTCAAGAATTAAGAACACTAACCAGATA
CTAATAAGAGCTTTGTGATTTGATTGGGCGCAAGTGTCGCATCTCAAACAGCATAAAATC
CGTCAGTGCTCAAGATCTCAGACACCACCCAGAGCTAATTACCCGAGAGTAAAAGCTAGC
ACGAGGCACGTCAACCCAATGGCAGTTGAGTCGAGCTAGGGGAAATACCGACGAATGGAA
TGAATGAAGAACCTGTAGAGTGAAGAGGCGGTCGTCGATCTTGACCTCCTTGGTGAGGAA
ATCGGCGCCGATGGTGGCCTTGTACTGGTTGCTGAACTTGTTGTTGACGTACCTGCACAC
CAACCACCACCGAACCGTTCAAGCCCCCACAACACAGAAATAAACCGAATCAGACGGATC
GGGCAGGGCGAGATCGGTGGTTCGGCCTTACTGGTTCATCAGCGACGTCTTCCCGACCCT
GATGGGCGATCATCATCGGAGAACAAAGGCGCGCATGTTGATCAGAGGACAGTTGAAAAA
TCACGCGGAAAGGGAAGGGAAACAAAAACTGGGGAGAGTGATTGCCGCGCACGCACCCGC
TGTCGCCGAGGATGATGACCTTGAGGAGCATTCGCCTGCGCGACGCCATGGCCGCGGATC
TATGCGCGACGAAGGGGGAGCGGGGACTCGGGAGTCGGGAGGAGGGAGATCGGAAGATTT
TGCGCTGTGTGTTGGTCTGGTCTGGTTTGGTTTGCCGTTGTCACGGAAAAGGAGAGAGAA
CCAAAGGCGTTTCTGTTGGACGGAAGGTTTCGCCGCTCCGCCTCCACCTGTTTCGTTTGG
ATGGACGCGTTGCTGGGCGGGCGAATTATTATTCCGTCAGTTTTTGGAGCAGCAAATCAG
CAGCATTGTTTCGTTATTTATCGTCGATTTGATTAATAACAGATACTAAGATTGATTGGG
ACAGGTAGATTTGGTCCAACTGATGGCTCTGTGCCACCTACAAGTATGATAATCTAATTA
TTATTGTGGGTTATTATTGTACACGGTTCGTCCGCGTTAGAGTGACACATATGTGCATGT
GCACACGGTGTCCCGAGTGCTGGAAACAAGGGACTAATCACTAATGTACTGCCGACTGCT
AACTGTGGCTCGCTCATACTGCACCTACTACAGATTTTTTTTTAACGGTCACGAGGGAGG
AAATCTTCGCCTGAATATATTGTTCAAAAAGTTGTCAAAGCCAAAGCTTATCTTTGGCTT
ATTCAGTTTATAAAGATAATTGGATCAAAAACCTAAACAAGTTGATTCAATTTATGAAAG
AAATCAAACTGAAAATCATACAAGTAAGAAGATTACATGAGATGAGAAAAGGACGCAAGG
ACAAGGCCCGGCCTAGCTAGCGGACTGGTGACCCACAAGTATAGATGATCAACCGTAGTT
TTTTCAATAAGCAAGAGTGTCGAATCCAACGAAAAGTAGAAGAAAATGATAAGTTGGTAG
GAGCTAGGGCTCTACCAGGCCTCTGCCTCAGATTATACGGATAGGAGGGGG