Contig Data
morexGenes
Links



Map Locations of contig_1593592 (3709 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1593592

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21199 1 841 bp AK355237 Available Available None
MLOC_21198 1 801 bp MLOC_21198.1 Available Available LOC_Os06g31070.1, FRAME:+2, EVALUE:4e-14, 13106.m03216 protein PROLM24 - Prolamin precursor, expressed





CDS Structure of MLOC_21199






CDS Structure of MLOC_21198






Contig Sequence (3709 bp)

>contig_1593592 3709 assembly3_WGSMorex_rbca.fasta
CCGGGGGGTCAATTGTTGCTGTTGTGGCCCCGTCATCTGCAACAGGCCCAGAGGCCTTTG
CCGTCCTGCGTGACGAGCGGGTAGTCGGAGGCGGAGAGGTTGATGAACCAGTCCCAGTCG
GACCCGCCGGCGCCGGAGTGGCCCCAGAGGAGCGCGGCGGCGGCGTGCAGGGTGCTGGCG
ACCATGGTGGGCCCGCGGTAGGTGACGAGGTTGGCCCGCTCGACGACGCGGACGTTGCCG
GCGGCGGCTATGACCGGGTGCGCCGCGAGGCCGGCGGCGAGCTCCCGGCGGTCGGCCTCC
GGCGCCTCGGCATCTAGGTGCAGGACGTAGAGGTTCCTGGGGTGGTAGAGCGCGAGGAGC
ACGCGGCGGAGCGCGGCGGCGTCCCTGGCGGATCCGGAGATGACGTAGGCGATGCGGGGG
AGGGATCCGGCGACGCGGGAGGCCGGCGGCGTCGGGGCGAGCTTGTGCTCGACGAAGAGC
GCCGGGGAGGGCGTGGAGGAGGGGACGAAGGGGAAGGGGACGGTGGTGAGGAGGACGAGG
ATGAAGAGGGACAGCGCCGAGCCGACGGCCAAAGGGAGCAGCCACCGCCGGTCCACGGCG
GCGGCGTGGACGACGATGGGCTTCATCGGCGGCGTGGGAGCAGAGCAGGCAGCGGCGGAC
CTGGCAGGAAAAAAAGGGCCGATCTTTGGCCGGTACAGACAGGTAAACGCGGTAATTCGA
TTTCAACTGTTCTACCTTTCCCTTGGTTTGGCTTTATGTTTTTAACACAAACATACACCA
CACATTACCTCTGTTAGCATCTTCGAGACACTGAACGGACATATCATTTTAAGACATAAT
CGATAGGAACATCTATTTTTACTGAATCCAAGGCTCGAAATAAATTCACAGAAATACGAG
CACCATTATCGAGTCTAGGAATTGAGCCAGAATGGGTTGAGAATATCATTGTCCTGCTAA
AACTTCAACCACATGTTGGTTCACATCAACACTTAACCTTGATTCTAACAATTTGAGTAT
CACAAAATTTTATGGGGCTTGCTACGACGTAAGCCGACGGATTTTTTTTAAAATATCCGC
GAGCTCGCGAGCCGTTAGATCTGTTGCATCGAGCGACAGAACAACTTCTTCACTTTTGCA
ACTTAGACTCAGTTTGCAGTTTTTCTGCAACTACAGTTTTGTTGCAGATTTTTTTGCAAC
AAAGATCTTATTGTCAATTCTTTTTGCAACTGAAGTTCCGTTGCAGGTTTTTTTTTTGCA
ATTGAGATTATGCTGCAGAAGCGTCGGGTTGTTGTACTATCTAATTTTAAGGATTCAGAT
CCTGCAACAGAGCTGTTGTTGCGATGAGAAATTGCAACAACATGCTGGTTGCAAAAAAAA
ATTATGATGATCATGAGGCATGTAGCGTGTAAAGAAGAGGGCGAATGCCAGCGTGCGATC
CACCGGATGATTTATAACATTTCCCAAATTTTATTTATGACAAGCTTTTAATTTGGGTAG
GAGATGATGACATCTTGGTGAGTCATTGTTTTTTTTTTGAAAATTTTGGTGAGCCATTGT
TTATCGTGTACTACTAACACATAATACACATGCTCTAACCTACAAAAGTCCAGAAGTTAG
CGTTCATGAAAGAGTAAGGTATAGAACACTTAAGCATATGATTTTTTTAATGGTACAATA
CAATACCAAAAGCAGGACATGTAAGTGTCACACGTCATTACTCATTGTATGTTTCCATAA
AAGAGTAGATATTTATGGAAAATGCCATCTATCTAATTAACACATGATGGCAAATACATG
ACAAATAAACAAAGGTAGTGGAAGATGACATCTAGATGCATTACTTATCTTGTGCTATTA
CCTTGTATAACACAATCTATAGCGACATGGTCTCGATCTTTCTTAATAAACCTGCACAAC
ATTACAAATTAAGTTATGCAAAAAAAGAAGTAGGGATCTCTGGAATAACATTACACGTGG
TCTCTTTCGGGGAAAATTGCAGATTCAGTGCACGTAACATCGTCTCAACAACTTGCGAAC
GTTATGAGTGCTCGCAAAGTAACTTTGTTCATCCAACTAAATTTGTAAACACTCAAAAGC
CACACAAAATGGTAGAGATAAATCATGTCGCATCATCCATGTATAAATAGTGTCCCCATC
TCATCTATTCATGTTCACCACTACCAAAACAACATTGACAACATGAAGACCTTCTTCCTC
CTATCCTTCCTTGCTCTCGTAGCGAGCACTGCTATTGCGCAATATGCGGAAGTTCCCAGC
CCAGCTGCAGAAGTTCCCACGGGGGATGGTTTTGGTGAATGGGTTGCGATGACGCCTAGT
GTGAGTGGTTCTGAGCAGTGCGAGCAAGAGCAGCCAAAGCTAAACTCTTGTAGTGATTAT
GTTATGGATCGATGCGTGACAAAGGATATGCTGCTCTCTTGGGTATTTCCTCGGACATGG
GGGAAGAGAAGCTGTGAGGAGGTCCAAGACCAGTGCTGCCAGCAATTGAGGCAAACGACG
CCGGATTGCCGTTGCAAGGCTATCTGGACATCAATCCAAGGTGATCTAAGTGGCTTCATG
AGCTTTCAACAAGGTCTGGAAGCTAGAACCTTGCAGATGGCCAAGAGCCTTCCCTCCAAG
TGCAATATTGATCCAAAATATTGTAACATCCCCATCACTAGCGGATATTACTGGTGATGT
AGCTTCCATTTGTAACTAATAAACTATCACATACCGCAATATGTGACCAATAAATATGAC
AATGGAATAATATATACTATAGTTTCCCTTATGTATGGGTTTCTCATACAAAATCTAATT
ATGCATATGTCCATCAAGAAACCAATGTTAGTTGTGCCAAAACAATAGGTTAAAGGAATG
TATGGAAGTGCATATAGGCCTCTAACCGAGTTTTGGTATTGACGGTAGAAAATTAAATAG
GCTAATGGGGACATGCATGTATCATAAGATTTTAACCCCAACCATGAAGGTTGTCGAGCA
TCGAAGAACCCTAAAAAATGAAAATAACTCAAGAATGTGCCTTGGTAGAGGTTATTTTAT
AGGCTCTATTCACATTTCTTGACTTTAGATATCTGTCACTATTTAGAGGGGGGCGTGGTC
GGTGAAGTGCATGCTAAAGTCATTTCTATGCTTAACGCTTGTCACTAAGGCGCTAACTAT
GGACGCACAACTCGACTCACGAATCAACCGTGAATTCCAGGTTTCCAAAGAACATAGTTT
GACATGGATTGTAGGTGTCAACGAATTTGATCTCCCCCACTAGGTTGGGGATGAAATTCA
TCGCCCCGAAGGCGAAGATCTGGCGCAGAGTAAAGATTCCATAATTGATGTTACATCCCA
TTTGGATGTCAGTTCCAGCAAGCACGACCGGTGCTTGGCTTGCAACTGTCGGTGTGAAAT
ATGGTAGACCCTCAGTACGGTGCCGCCATTAATCGACAAGCTAGGGGGGCAGGAGACAAA
TTCAGTCAGGTTTAGGCCCTCGCGATGGAGGTAAAACTCTACTCAAGCCCAGGTTGTCTT
GGTTGGATGGGGTTTACACAGTACAATATCTCAGGGATCATGGGGGATGATGAACAATGC
CTCTATCGACTAGCCATGTCCCAACTTATAAAGAATATTGATGTCCTGGGGCCAGAGAGT
GTTGGTGAAAGTGCGTTATATCGACTTGAGGGGGGTGAATAGGAGATTT