Contig Data
morexGenes
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Map Locations of contig_1593429 (3934 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1593429

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21170 1 876 bp MLOC_21170.1 Available Available None
MLOC_21169 8 1592 bp AK367116 Available Available None





CDS Structure of MLOC_21170






CDS Structure of MLOC_21169






Contig Sequence (3934 bp)

>contig_1593429 3934 assembly3_WGSMorex_rbca.fasta
GCTCGCCGACGTTCTTACCAAGGCATCGTGGGAGGTGGCGAGCGGGCGTGGGGTGGCACG
CCGTGAAGCTCGGATCACTACCCCGTTTTCCCTGTAATCAGTAGCATAAATAACGAAGAA
GAAGAACAGAAAAGTTGCAGGTTTTACGCAACACAAACCGAGTCTCTCTCTGAATCCAGC
GAAACTTGCTGCCGCTGGCTGACAGGGAGTTCCCGCATACGTCCTGCTATCTAACTGTTT
GTTCATTATCCCGCAACAACAAAAAAAACTGTTCGTTCATTATTTTTTTGCTTATAACTC
ACATGGAAATGTTTCTGACTCTAACCAGTTAGGTAGGTTGGACGTGTTTCAGAATGCACA
ATGCGTGAAGGTCAATCCGGATTCGCCTCAGAAGCAAGTTCGATTCTTAACACTCTCAGG
TGATAAGGCTGCTACTTATCCTTGCATACCTTAAAAAATGCATGTTACCATTGGCTGTTA
ATATCTTGTTTCGTTTCTTGTATTATCCCTGCAAGCCAGATCAGACTTTGATGAGGCTTA
TAGCTTTCCATGCCATTTGCGCGTTTGAACCTGATGCTCATTTTAGCCCAGTACCCAGTA
CGGAGTATAAATTTGTCATACACACTCGACCAGGTTGAACGTTTCTTTTATTTACAAATG
GTGCTACTGGAATCATTCAGGCGATAAGAAACTTCTGACCCCGCAACCACGGCTCAGGAC
AGGCTTCTTCTCCTTTCTACAATCTCAGATGATACCCACTGGATGCATTCCTGAAGCATG
CACTTCGGTTGGCGCAGCCAAATATGGAAGGCCGATAGGTCTAGATGAAATGATTAAAGT
GGATCTGATTGTCATTGGGTCGGTTGCAGTTGATCCAAGCACGGGAGCACGACTAGGGAA
GGGTGAGGTAATTATTTTCTTGCATATGCGGTTGAAGAATTGAACTAGAGTTGATTTTGT
TATAATTGGATCAATGAACAAGATCAACTCTCGACCTTTGCCAATGTCAATGCTGCTTCT
TTAATGAAGAAACAGTAGGGAAAGCCTCTGCTGCGTCATTTTCATTTTATAAACGGAGCA
CCATACAAATGGTTATGTACAATGTCAATGCTGCCCTGAAAATGAACTGTGCTTTGTCTA
CCGAAAATGGATTCTTCTCGCTTCTTATCTGTAGTTTACTCTATGAATGTCGATCATAGG
GATTTGCAGAGCTGGAATATGGGATGCTTCGTTATATGGGAGCTATAGATGATTCGACCA
TGGTAGTAACAACTGGTGAGTTTATTTATCAGATGGTGGTCCATTATTTTTATACAGATC
TAATTGGTTTGGTAACGTAGGAACTAGGATAATTGATATATAGGTGAGCATCTTCTCATT
CTTCAGCATGAGTGGCAGCTTTCTATTTTGTTTTTCTCAAAATATTTGTCAGTACATCTT
TTTTATGTAATAGCCTGTGGTTAACTGGACTTAACTTTATAGTTGTGACGCTAGTAATGG
TTGAGATACTGGTGGTATTTCATAGATCATTTTCTTCAAGGAATCATCTATGTGGACATG
TCGTGCCTCTTCTTTTCTGAAGTAGAAAACAATTGGTGATTCGTTAGTTTCCATTTGAAA
GATTGAGTAGAAACCAGCCCAGTAGTATTAACTTCTAATTTTGTCTATGGGTACAGTACA
TGACAAGCAATTAGTGGATGACATTCCAGTTGAAAAGCTGCTAATTCATGATGTACCGGT
TGATATTATCTGCACCCCAACTCAGGTCATCTTAACAAATACTGCAATCCCAAAACCACA
AGGTCTGACTGATTCCTCTCACTAGATAGATTTGCAAATAAATCTCCCACCACCAGATTT
TGAAGAACTTCTGTATGTGCAGGGATTTACTGGGAAAAACTATCTCCAGAAAAATTGGGC
CAAATTCGAATTCTAAGAGAGCTGAAGAGACGCATAGAGCAAGAGACAGGAACAATACTT
CCTTGTGGGCCTTCTGAGAATGTACCACCAACAGCTCAGCGAAGAAGAAGAGGGCGGTAA
CTAAGTACGTGTATCATAACTGCCTGATTCTATCGCATGTTATACATATATTTTGGAGAA
AATTAAGGTATCTTAAGCATTGCGCGGTTCAAATATCGTGTCTATGAAGACTTGTTTACA
TCATAAAAATGTCATATTGTTTCATCTTTTAAGTTGAGTCGGCAACATAAATTAGTACTC
GTGTGGCTGTTCCAATGCCCTATTTGATGGTCTTCACAATCACTAGAAAACGGATTCTAT
ACTGTACAGCATTCGGAAATGTTACTCAACTGGTGGCATGATCAACTTTAATTAAACCCC
AATGATGTGCATCATACTTGGCTTATATGCTGACGTGTGTTCAGATGTGTTCGTGTTGGA
ACAGTCAAAGCGCACATGTGTCCCGCTGATGCGGCATTGGGTGATTGGCTCTTACGCTTT
TGTCCTCCACTACGAGAGTTGTAACCAATTTGTCAAAGTCGTTTAACTAAACTAGTAAGC
TTGTGCGTGCAACGCACGTCTCGACTAATTCATTTTTTAGAGATAAATCTACTCCCAAAC
AAATACACCTTGTCTACATGTCTCTCACACTACCATATTCTTATAGTTCTTAACAAGCAT
GAATGTCGGATTTGACAACGTCATATGCCAAGAATGCGCTCATCCATTTTAAATGAATAT
CATGTCCAACCAAACAGCATGCACGATGGTTCGCTCTTTTACCCTGGAGATGAATTCATC
TGGATCATTTTGTAGATCATCCATCATTTTGTTTTGCCTACAATTCCAGTATATGCAAGT
ACACCACTATTCAGCAGGATCTTTATCTATTTTCTGAAAACATTCCTTTATAGTTTATTT
CAAACTGAAAAGGATATTTTTCTATTTTCTGAACAAATTCTTTTATAAGTAATCTTGTAC
ATGCACAGAACAGAAGTAAAAGACAACTTGGGAGTTGTCTATTTCAAACTGAAAAGGATC
TTTATCTATTTTCTGAAAAGATTGCTTTATGGTTATTTTTTATTGGTCGGTAAAATTAAG
TAGGAAGACAGGATTATGGTGGGTTCATTTTTCTCTTTCTTTTGGACTGCAGGAGTGATA
AAATGGTTTCTTTTGTTTTAAGCACTAAAACATTACTTGAGCACACAAGTTTAGCATATA
AATCATGACACTGTTCTCTTTGCTAGAAACCATGTGTGCGATGTCGGCCAGTTTTATAAC
ATGGGCAATAGCATCAACAGGGAAAGTAATATGTAATTACAGAGAGCTAAACTCATAAAT
ATTCTCTCAAAATCCATATTCCAATGAGTTGTCATTGTCTGACTCTCCTTCCTGTAGTAT
TTATAATTCTTTTCAAGGTAGGCTTCACTAAACAGTTAAGAAACTTGGAGGTTCCATTCA
AGAGAAAACTCGAGACATGTTTTTCTATGCATATTGATCTATCAATGATGATGACAACAA
GGAATAGTGTTTCACACAGTAGCTCAAGCTTTTGTATTCACCTGCATTGGACAATGAAAC
ATTGGGGTTTGTAAGAACTTTACATTCCAGAGAACACTAAGACAATACTACTTTGCCGAA
TCCACCGAGCATCATCCTCACCTCAATCGTCATCCTCACCTCAATCAGTCAATCAGAATA
CTACGCCTTTTCTCATTCATATCAGTTTGGTGTGCCATGTAGGTGGGGGCCTCACAACTC
AACTCCTACAGCACAGATAATATAGCAATGAGATTATTATTGTCATACTAGGTTTCCACT
CTGTAAATAACTTTGACGGGGTGTGACAGCCCGATGCCGACNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTCGTGTGTCTGTTTTATTTTGTCGCACCATCATCGCATCATTCGCA
TCATCGGGATTGCATCGGCATCTCCGCTGCCGCC