morexGenes - Barley RNA-seq Database

Contig contig_1593246

Source Contig contig_1593246

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1593246 (2583 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_1593246

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_21120	2	1543 bp	AK361863	Available	Available	None

CDS Structure of MLOC_21120

Contig Sequence (2583 bp)

>contig_1593246 2583 assembly3_WGSMorex_rbca.fasta
CTTATTATAACATGCTCCTCTACATGCAAGCTTTATCTGTGCCTTTGGTGAAGATCTCTT
CTTTGCCAGGCACAAGAGAAGACACGTAGAGTTGAAGTTTGCGTTAATGATGATAAAATA
GAGATTGGGAACTTACTGATCAGAAACTTGCATGGACCTTATAAACTGTTGCTGTAAACT
GAAATTTCATTCATTTTTTTCTAAGCTCATGAGGGCGTGTTGGTTATCTGGGCTTGTTAT
TGCCTTATTTGGAATCATTTTTCTATCTGAAATGATGAAAGTTAGCCAAATCTTATTATA
ACATGCTCCTCTACATGTAAGCTTTATCTGGCCTTTGGTGAAGATCTCTTCTTTGCCAGG
CACAAGAGAAGACATGCAGAGTTGGAGTTTACGTTAATGATGATAAAATAGAGATTGGGA
ACTTACTGATCAGAATAAACTGTTGCTGTAAACTTAGATTACATTCATTTGTTTTTCTTG
TCTCAGTGATTACTGTGTAGATGTGTTTTGCATTACGTGAGTCTTGAGCTTCTCCATGTT
CATGTTTGCTGTTCTGATGGATGGTAATTTAGTTCTGGCTGGATTTCTCTGTGTCTCTGG
GTCTGCTTTATGAAAAATTCAAGTCAATTTTTAGGATGGTTTTGTGGTGATTGTCGCAAT
CAATTTTTTATTTAGACAATAGTTACCGCTTTTACAGATATTTACCCAGTTTGTTTGATC
ATCATGCAGAAAATGAGACAACAATCCCACGAGACAGGAAGAGCTGCAGCCATACCCATC
ACTGTGAGGCAGCTTGAAGCTATTATACGGTTGAGCGAATCTCTTGCAAAGATGAGATTG
TAAGTGCAATCTGATCACATGCTAATTATTCCACAAACATTGTTTTGACACTAGCTTGAT
TCTGGTACATTTAGAAGATCTTTATGTATTTAACATCATGACTTGTGGCTCTTAAGTTCT
GACAAACAAGTATCATGGCGTTCCTTGCTGACATGTAAGTGGTTCTCAGGACTAGTGTGG
CTACGCCAGAGCACATAGAAGAGGCATTTAGACTGTTCAATGTCTCCACCGTTGATGCCG
CAAGATCTGGAATCAACGAGCATCTTAACTTGTCACCGGAGATTGCAAATGAAATCAAGG
TGAGTCTTGCATCCAAAACTAGAATATAGCCTTTTCAACCTTTTGCATCTCTTGAGTTTC
CCTTCCATTTCATCCCAACAGCAAGCCGAAGCGCAGATAAAAAGAAGGATGGGAATTGGG
AGCCACATATCTGAGCGACGGCTGCTCGATGAACTGAATCGGATGGGGATGAACGAATCC
ATTGTAAGCAACCTGTCATCTCACACACAAAAGTTCTCTCAAACAAATATCATGCATAAT
AGTCTATAACTGCTAGATTTCTCACTCGCTCTTTATGTTCCTGCTTCAGGTGAGAAGAGC
CCTTGTGATTATGCACCAGAGGGATGAAGTGGAGTACAAGAGGGAGCGCCATGTGATTGT
CCGCAAGGCTTGAGCTGAACCGAACCATGGAACTATCTGATGTGTGTGTATAAGTAGTGC
TGACACTGCAGCCTGTTTCATGAGGAAATTTGTTGCGTCGTTGAAATTGAGTTGTAGTTG
TACTACTTTAAGCTGTAACTGTAGCCCTAAATTATCTTGTGTCGAACTGAAGATGTACCA
CAGTAAGTTCATTCATGAGTGCAACATTTGGGCGTTCTGCAGCTGAGCAGAGTCTATGCC
TGGGAAACTCAAACTTGCTCTTTGCCCTGCATTGTTTTGCCGTCAGATTTCGCCTGTCTT
TGTCCTGTGAATGTGATTTGCAGAAGGAAAGACATAAGTTAGCTGATTTTTTCAAAATCT
TGCTTATGCTTGAATATAAACCACATCTTCAAGGGGGTTCTCAAGTGAGTAGCTTGATTG
TATTGTTCGTTGAGAGTTCAAACCATTTGCGTTCTTGCATCATCTTTCTTGTTTATTGTT
TCTTTTTGTGAGTTTTAGAGCTTTTGTTTTGGCCTGGAAAGAACCAAGCGGTAGCATCGC
GCGTCAACATTTTTTGTGTCGGACTGAGCGGTTTCTAGACGGTAGTACCTCTCACGAGCA
GTAGTACCGCAGCACTACCGCCATTTCCTTTGGGCCATGAACCCTCAGTGGACTAAGAGC
GGTACTAGGAAGTGATACTACCTCTTATCTACAGTATTAGCGCTCTGGGTAGCGATAGTA
CCACTTAAGCGGAATTGCCTTTGTCCCTCCTTCCTCTCTACGTTCGTGAGATGTTGCACT
GCAACCTCAACGGTAGTACCATTGGGGAGAGCAGTAGTAACGCTTCGGCGGCACTACCCC
TCTTGGCCTCGTGCCATTCTACTATGTGGTTGGCTCTGTCGCCCAAGCGGTAGTACCATT
CTCATGAGTGGTAGTACCGCTTGTGTGTGGGCTAAGGGGGTCACGGTTGGATTTTCCCTC
TCCTATAAAAGGGGTTCTTCCCCATTGAACATTATCTCTTTAGCTCGTGTTCTNNNNNNN
NNNNNNNCCTTCTTCGAGCTTGCTACCTCTCAATCCCTCCAATGATTGTTGCTAGTTCTT
GAG