| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_159285
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_21022 |
2 |
700 bp |
None |
Available |
Available |
LOC_Os03g01270.2, FRAME:-1, EVALUE:7e-47, 13103.m00043 protein expansin precursor, putative, expressed |
CDS Structure of MLOC_21022
Contig Sequence (8202 bp)
>contig_159285 8202 assembly3_WGSMorex_rbca.fasta
TCCTTGGCCATGGCGCCGAAGGCGGTGCCGCTGAGGTCGAAGTGGTAGCGGGACACCGGG
TAGTAGTTCATGTCGGTGATGATCACCGTCTCAGGGACGCCGGAGCAGGCTGCGTGAGCC
ACGCACCTTATCTGCACACAGCGCAACAATCCAAGATCCATCAGCTTGGAAAAACAAACG
AAACGACAAGCACTCTACCGTCATTGTCAAGCGACTGCAATGTCGGCCACAGTGGCTGAC
CTGGTAGCACGAGCCGCATCCCTTGCCGTCCTTGAAGAGCGGCTCATTGCCGCACGACGT
CATGGCGTTGAACGGCGGCAGGTTCACGTTCTTGAACCCGCATGCGCCACCATTGTCGTC
AGGCCCGGCGCCGCCGGGAGCGCCGTACCAGGTGGCCCTGGCGTCGAGCCAGCCGTCGCC
GTCGACGTTTGTGCCGCTGCCCCCGGTGCTGGGGCTGGGGGTGGGGGTAGCGGGGGCAGG
TGTAGGTGTGGGGGAGTGTCCAGGGCAGAATATGGCAGGCAGAAACCAAAAGCAGCCGCA
GCAGCCATCGGCGGAGAGCAGGCAGAAGAGTGCGACCGTAACGGCGTAGGAGGATGCCGG
TGCCATTGTTCGCTGGCTCGCTGATCTGGCCGGTTGCTGATGGCCGTACTCTGGTGGTTA
ATGACTTAATGCCGTTGGGGGGCGTGTGAATTTATAGGCCGGCAACCCACTTGCTAGCTT
CTTCTTCGTCTACCAGATCAGAAGGAGGAATGGACGAAGGAATGAATGAACGGAGATGGC
GGATGGAGAAAGGAGTAGCCGTGATGGCATGGCCGGTTCACATGTGGATGGCGGGACTCG
CCCAACTGGTTGCTATACACCATTACCCGTGGTCACGGGATGCATTTGTCTCTGCTTTTA
AAAATCAAATCATACATATATACTGCATTTACAGGTGCTTCCTCCATGTATTTATGCATG
CAGCCAACGTAGCATCATGCAGATTGCAGATCATAGAGGCATCTGTTTCTTGGCGTTTTC
TACGGTGCCGTATAATACACTGCCACATGATTCGTCTTGCAACCAAGCTTGTGTTTTTAT
GCACTGCCAAAATACCAAACTAGTGCTACGAAAATGCGTTAGCTTAACAGGTAAATATGA
ATGCCTAGAATAGGTGATGTATTTTACATTACAAAGATAAGGTTGGAGTAAAATATAGAT
CTGCAAAAAATGCTTTTTTACATCACCGAAAACATCCAACTCTAATAACTGTTGTAAAAT
AGAGCAACCGCGCACGACAGCCGCTCCAACATATGATGTAAAAATAGATCAGCCGCACAA
CAACAACCAACAACAACATGTGTCAATGGAAATCATCCAAAATTTCATCACACACATTGC
ATATGAGTTTGACAAAAGTGCAAAATAGAATAAACTTTGCAAGATCGCCACACACATAAT
CAACAATATGTCAAATTCATCATAAACATAGCAAAGTTCATACAGAAAGTTAAAACATAG
TTCATACTAGAAACATAAAACACATATCATAGCGATACTATTTCATACTATTTCTACCTG
ATCATCATTAAACATAAAAACTACTTGTCGGAAGCGGTCACGAATGCGCAAAACGTTTCG
GAGTCGTGGAGCTCATCGTTCCCGTCCTACACCTCTAGTGCGGATTGAACATGGATCATC
GTCTATGAATGGGCCTTGTCCTCCCGCTGCTCGGCCTCCGTGAGTTTCCTCTGATTGGTC
GGAGATTCACGTGGAGTAATGAGCAATCTCCTCCAACGCTTGTTCACCTAGACTGCGCTT
TCTACAATGTTGATTGGGAACTGCTATTCCCGGCGACCAAACTGCTGCCGCAAGCCTCAT
CCGTGTTTGACCACTGCCCGCTTCTGTTAAGAAATGATGATATATTTGCAATCAATAAGA
GATTCCAGTTCGAATCGTACTGGTTGCACGTCAGCAGTTTTAAGGAAGTTGTGGAGCAGT
CGTGGAACTCTTCCATAGATCGTTGTCTCCCTATCACGCCTAGATTTCAAACTATGGCGG
CTTAGCAAAGCACTTAGAGCTTAGAGCAAAAATTTCATGGGTGATATTCAGAGGCAGCTT
GCTATATGCACAGAGTTACGGCTGCAATTGGACACTGCCCAAGACCACATGTCACTGTCC
TCGGCCGAGTGCGAATTGTGCTCAAATCTAGAATCGCGAGCATTAGGGCTTGCCATGCTT
CTGAAAACAAAGCCGAGGGAGCGTAATCGTGTTACGTGGCTCAAAGCTGGTGATGCCAAC
ACCAGGTTCTTCCAGAGGAAAGCCAACACCACGCATCGTAGAAACGCCATTCACGTGCTG
CAGGGCACGAACGGTCCAATCACAAACAATGTCGCAATGGGAGAGCTTGCGCGAGAGCAC
TTCAGCAGGATTTTCGGTTTCGAGAAACGCGTCGCGTCTGTGATGAACTCGGACCATCTT
GATCTTGATCAGGCGGATCTAGCGGATATAGAGGGGTTTTTCTCTATTGAGGAAATCAAA
CAAGCCATCGACGACCTTCGGTTCGACAAAGCGCCTGGGCCAGATGGCTACTCATGCGCC
TTTTACAAAAACTGTTGGGATACCATCAAGGGCGATGTGCATGAGGCGATCCATCAGCTC
TACCAGCTAGTCTCGTCAGGGCTGGCTCACATAAGCAAGGCTCTAATTGTACTCACCCCA
AAACTGCATGGAGCCTCCTCCCTGAAGGATTTCAGACCAATCTCCCTCGTCCATAGCATT
ATCAAGATTTTCACTAAGCTGCTTGCCAGCCGCCTTGCATCAAACTTGTCTGCTTTGGTT
GACCGATGCCAGAGCGCCTTCATTAAAAAACGAAGCATTCAAGAGAATTTCTGTATGTGC
AAAACACGGTCAGATATTTGCATAAACATAAGAAGCCGACAATCATGCTGAAACTTGATA
TTGCTAAGGCCTTCGAGTCAGTTCCCTGGACCTACATTTTGGACATGCTGGAAGCGAGGG
GATTTGGGCCTAGATGATGGGAGTGGATCGCCATGATTCTGCGCACATCCTCGTCGCGCA
TACAGATCAATGGCCTTTTATCTGATGGTGTGCAACACCGCCAAGGATTCAGGCAAGGGG
ACCCTGTCTCCCCTTTCCCTTTCATCCTTGCCATGGATCCTTTACAACAAATGTTCCGCC
TGGCTACGGATGAGGGGCTGCTATCTAAGCTGCCCGAGCGAAGGAAATGGATGCGATGCT
CCTTCTACGCGGATGATGTCGCGCTGTTCATGAATTCCAATGTTAGAGACGCCCAAATGA
TCAAGCTAATTATAAACTGCTTTGGGGAAATTTCAGGGTTGCGCATGAATATCTCCAAGA
GCTTCGCATTACCAATCAGATGCGATTCCTTGGATCTGTCGACCATCCTGGCGCCCCTTG
GCATTGCCACGACGTAATTCCTTGTGACTTATCTGGGGATGCCACTATCACTTCGACATC
TCACAAAGGTGGACCTTGACCCCTTGGTTTTCAAATTTGGTGACAAACTTTCATTATGGA
AAGGAAGATTGATGGCGAAGAGCGATCCTTTGATACTCCTGGAGTCAAACCTCATCCCTC
TGGCAATTTACATGATGACGGTGCACCGACTTCCACGTTGGGTTCTCAAGCGTTTGGTGC
AACTCTGTCGGGCATGGCTCTGGAGTGGAGAGAGCACATGTAATGGAGGAAATTGTCGGG
TGGCATGGAGCCTAGTCTACCGGCCAAAGCACGTGGGAGGGTTGGGGGTCATGGATTTAT
CAAAGTTTGGTACGATATTGCGGCTGAGATGGATATGGATGGCTTGGAGAGAGCCAGGTC
GACCTTGGGCGCCAGGTCTGCTGTCGTGCAATTAAAGCGACCGCATGCTATTCTCCATGG
CTACAGAGATCTTAGTTGGCGATGGCGCAACAATGAGTTTTTGGAAGGATAGATGGCTAC
ATGGATATTGACCGAAAGTGGTCGCACCGTCCCTCTTCAAAATTTCATGTCGAAAAAATC
GAACTGTATGTGAGGCGCTTGAAAGCGACACCTATATAGCTAACCTCGCACGAGGTCTCT
CTGAGGATATGATCCCGGAGCTTACTGTGCTGGCCGACCTTCTGGACAAGGGAGAACTGA
GACCGTGCCAATCAGATTCTATCCGCTGGCGCCTATCCTCGGACGGTTAATACTTGGCGC
GTTCAGCCTACCGACTCCAATTTGCAGGGTTGATACCGCTAGATAGACATAGGATCATAT
GGGCATCTTGGGCTCCTATGAAATGCAGGTTTTTTGTTTGGACGGCGGTGCTGAAAAAAA
TCCTTACCGTTGATGCACTGATGAGAAGGGGTTGGGAGAACAACTACTTCTGTCTGCTCT
GCGTCCGTAGCCTCGAGACGCGAGCGCACCTTCTGATAATCGAACAACCCATGGACGAGG
GGTATATGGGATGCCATTGCGTCCCTAGCAAATTTGAACGCGCTACAAACGTCCAGCTGG
TGCACGAACGGTGACCTGATGGAATGGATGAATAGATGTTACTCGGCGGCTTCGAAGGAC
AAGAAGAAAGGCACCATGTCGCTCTTACACCTGGTGTCTTGGGAAGTTTGGCGTCAAAGG
AACATGAGGATTTTTCAGCACGACAAACTCTCTAGGTCGGACCTTCTCGTCAGAATCAGA
GAATAAATCAGGCTATGGAACATGGCGGGAGGAGGGATTCCTTTCGAACCAGGCTGAGCT
GGTTTTCCTCCATTTCTTCTTCTTGTTTTTTAGCGTCACTTTCTACATCTTTTGCTCGTG
TTTTCCCTCTTGTCTTTTGTTACCTTGTAATGGTTCACCCTTCTGATAATTAAATTTGGC
AATCCATTGCCAACATTAAATAAAATAGTACTCCAACTCATTCTGGACATACTCCGGATT
TTCCCACGCGAACCTCTCCATCGCCACTTCATCACTCTCGTCGGGAGCAATGTGAATTCG
CGACATCTTCTTCTTCACTTCAATCGGCCATATGGTAAGATTCTTCGGGCCGATGAACTC
CACTTGCTCCCGGGTTTCGATCTTTGGAAAATTCAGCTTGTGGCTCATTTGGTCGACGCG
CCGCATGGCGATGTCATGCGCATGCGCCGCCTCGTCGATGGACTCAAAGGTGCCGAGCTA
GTAGTGACGGCCATCACATTGGAACTCCACACCAAAGTTGTCGGAGAGGCGCATCCGCAC
ACCCGCGAAGCTGAACTTGCTCTTCGACGGCTTGTTCGACTGCATGACGATGGTGCATGT
GTGGGTTCGATGCAGGCGACAGTGGCAATTGGAGACGACGTGCCAAACTGTGGCAGGGTG
TCAGGGAGTGATGGTGTCCTGGATTATGGGTTGCACACCACCACGGCTCGTCATATATCT
GCCAGACCGGGGACCCATCGATAACTAAAGAATGGGCCCCGCATGCCCTGGCCCTCGGCG
TGATCAAGATGGAGTTGTGGGATGACATGGCATACACTTCAAGTCATATTTGAATGATCG
GCATGTTTATCCCGAGATTGTAATCGACCATGTGTAAACCCTGTATAACCCTGTGCTTAT
ATAAGTCGTGGGGTTTAGTCTGTAGTGGTAGGGATGTCGTGATTGTAACCGACCATGTGT
ATGCCCTCGATACCCTTCGATCGACATGGATGTCATGATGAAGGACGTCCCTTCTGCCCG
AGTACCCACGGTCTCCCCGGTCAAGGCTCTCACCGAGACTGGTGGTGAGAGTGCTACTCC
TAGGGTTGGAGCCGCACTCGGGGCCGCCACACGTGCTTCCTCACTGGTCCCAGTTGTGGC
CAACCTCTTCGCGCTGCTCCACATCCTTGAGGACCAGGTGGGCGCGGGACAAGCATGCCA
TGATTCAAGTGGAGTTGATAAACAACCGACTAAAGGAACCATATGATGCCAACGAGGCCT
TGAAGAGAAACGTTCGAGTAAGTACCATCATAAGTACTCATAACCTACAAGTGTTTGGGA
TCGTTTGTAGCCTTTTTTGATNNNNNNNNNNNNNNNNNNNNNNNAGGAGCTAAATGTAGA
ATTAATATTCTATCAAGTTCTATTGACCATCGGTACAGCTCTACGCACGCTAACGGTTAC
TTTACGTCGAACAAGTATGAAACTACTTTGCGGGAAGGAAACTAGAAGTACTTAGTAGGC
GTGATAGATAGTTTTATAAGGAAATAAATAGCAAGTAAATAAACGTTAGATGTTGTTTTG
CAAGAAAATAAATAGAGTGGAAATAAAAGTTAGGGGTTGTTTAGTAGAAAGCTTTTTGTG
TAACGCAATAAAACGATTGCCCATAGGCAATTGAATATAACATGNTAGATACTTATCATA
TGCAATGAGGAAGAGGCATACGCTAACACACTTTCCGTACTTGGATCAAATGCACTTATT
ATTGGACCCCTAGCAAGCATCCACAACTACTTGATATCATTAAGGTAAACCCAACCATNN
NNNNNNNNNNNNNNNNNNCTTTACTCCCATACGCAAAAAACTCCCTTACTCGGGTGTAAG
CTGGTGTGACTCGAGCCACCCATTATAAGAGAATCATGAAGATGTTGCAAACTCTCCAGC
ATGTATCCTTCACGTGTGCGCCTCACGGAAGGCACCTTTGGACAACAACATATCAACACA
TAACTCATATAAATAACATCATATCACAATTNNNNNNNNNGACAAAACAAATCTACTCAA
ACATCGTAGGATAGCCACATATCATTGGATAATAATATATAACATTAAGCACCATATTCA
AGTAGAGATTACAACGGGGAATATAGGTTTTACACTGCTTCATAGAGGAGGAGAGAGTTG
GTGGTGACGACAGAGAAGTTGTTGGTGTAGATCGCCTTCACGATGGTTACCCCAATGGCG
CTCCGGCACCACTGGGAGAGGGGGAGATAGCCCCCTCCTCCTTCTTGTTCCTTGGCCTCC
TCCCTAGGTGGGAGGAGGGTTTATCCTCTAGTCCATGGCTGCCATGGCACCCGGAGGACA
GCAGCCCCTCCGGGATTGGATCTCTCTCTCTATTTCTCTCGTGTCTTCGTGACCTCTTTT
CTGGCCCTTGACCATTTCTTAAATATCCGGAGATCCGTAACTCCGATCGGGCTGACATTT
TGAGGGGATTTTTATCGTGAAAATATCTTCCTTGTGGCGCAAGGAGAGCATCAACCAACT
TAAGGTCTGGCCACAAGCCATCAGGGCGCGGCCTCACCCCAGGTCGCGCCCTGTTGGCTT
GTGCCTCCCTCAGGCACCGGGTTGCGTTGATTCTGACTCCCAAAATTCACATATATTCCA
AACAAAAATCTGTAAATTTTTATCGCGTTTGGAGTCCATTTGATATGGATTTTAAGAGAA
AAAACACACAAAAAATATGAACTGGCACTAGGCACTGGATCAATAGGTTANNNNNNAAAA
ATAATATAAATTGGTAAATAGTTACTGAGAAGTATCCTAGAATGATAATATAATAGCATG
GAACAAACAAAAAGTATATATACATTGGAGACTGATGACCCACAAGTATAAGGTATCAAT
CGTAGTCCTTTCGANNNNNNNNNNNNNNNNNNNCAACAAGGAGGAGAAGGAAATGACAAA
CAATTTTCAACAAGGTAATTTCTGCAAGTAGTGTAATAGGAGTAACAAGTTGTTTGATAG
TAAGATAATTGTAACAAGTAACAAGTAGCAATAGTACAAATAAGTGCAGAAAGGTAGTCC
AATCCTTTTGTGGCAAAGGATAGGCCAAAACAGTTTCTTATAATAGGGATAGCGTTCTCG
AGGGCACACGACAATTTCATCTAGTCACTTTCGTCATGTCGGGTTAATTCGTGTTCGGTA
CTTTGATAATTTGATATATGGGTGGACCGGTGCTTGGTGTTGTTCTTACTTGAACTAGCC
CCCCACTTATGATTAAACCTTTCGCAAGCATCCGCAACTGTGAGAAATGTACTAAGAATA
AATTCTAACCATAGCATTAANNATAGGGATCCAAATTAGCCCCTTACGGAATAGCGCATA
AACTGGGGTTTACATTTCTATCACTCTCACAACTCACCATATAATAAATACTCCACAATG
CATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTCGATGTTTACATAACACCACT
AAGGGAATCNNNNNNTTCATATCATCAAAATATCGAATGAAT
