Contig Data
morexGenes
Links



Map Locations of contig_1592786 (5156 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1592786

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21006 3 1722 bp MLOC_21006.1 Available Available LOC_Os12g09120.1, FRAME:-3, EVALUE:1e-57, 13112.m00966 protein mRNA-capping enzyme, putative, expressed





CDS Structure of MLOC_21006






Contig Sequence (5156 bp)

>contig_1592786 5156 assembly3_WGSMorex_rbca.fasta
TCTAGGGCATATTTCCAACAACAATGCATCCGCGAGAGACTCAAGGCGCGTGTCTGCTCC
GGATCCAGAGCTGGCGAGTGGTCACTGAAGGTACAAACACTTTGTTTCTACAAAACAGAA
CTAAGTTTCTATAAGAAAAAACTAAGTTTCTACAAAACGGAACAAAGTTTCTACAACAAA
AAAGAACTAAGTTTCTACAAAAAAGAACTAAGTTTCTACAACAAAAAAGAACTAAGTTTG
TGCAACAAAAAAGAACTAAGGTTGTGTTTGGTAACAAAGTATTGTAAAAACCAAAGTATT
GAAAAACTACCATTGTGTGTCGTTAGTTGTTGCAAACATACATGTTTTTTAAGCCAATGA
CCGTTGCATGCAAACTGTAGTAGACTAGTTCACCAACGGAGTCGCTACTTCTTCCTCTAG
CTTGCCATGCTGATTTTTAATCATATACTGAAGTAGGAACCAGCCTAACTTTGATATGTT
TCATTGAGTCAAATCACAGTGAAGATCCTGTTTTTTAAAGAAAAATCAAGGTGAAGATCC
TAACGGAGATCCAAATCATCGAGCAGAAGATCGTACTAAACCGAGGCAATCACATCTGGT
TAAGAAAGAATAACCTTGCGTCATGCGTGAATTCACGTTTCTCGGTTGCTGAGTTTAAAA
TTGTAGTATTCCTAAAATACTTAGAAAATACTTTGCTACCAAACGGGACATAAGTTCTAC
AACAAAAAGAAGCGGAGATAGCAACATACCAGTCAAGGAGACGCGAAGGTCCTTGGCGGC
AAGGAGGGTTTGCGGGCGGTGACGGGCGTCGTCGGGCGTCAGGGTGGGCGGCGGCGGGAG
GCGTCGGACGGGGCGGCGGCGGGGATCGAGAAGAGAACGAGGGAGTTGGGGCTCGAGAGT
GTGGGGATTAGGGCATGCGGCGGGGATTAGACAGGTTAGTGCTGGCGTGGACCTAATGGG
CCTAATATGCAACGTCGGGGCTAATGTGCAAGGACATCACTAATTTGATAGCTATGGCAT
TCAAATTTGTTCAACGACAGCACTATTTGAAAATATTAGTGTTGGCGTTGGTGAGAAATG
ACGCGCCATGAATAAGAGTTGTGGCTAGCCATTTTTTCAATAGTGAAGCATGCGCCCAAG
GACAACGTCGTGGCATCCGAGCAACCCTCGCATTGGGTCCTTGTCCCCCGACATCAGACT
CCTACTCCAAGGTCAACACCGCCAATGTGCACGGCCATGGATGCTTTGGATGTCCCAGTT
GTGATAGCAAAGCTAAGATAGAAGCTCCACGTACCCTCCGAGACAGAGCAAAGGCACACA
CCACAAAGGGCGATTTCCATCACGTTGTGTCGTACAAGATAGTGGTTGACATGCGTGCCC
GGATCCTGATGAAGGGACAAGTCCGGGCGATGCGTACCTAGCGGTGGAGCAAACTCGGGT
CGTTTGTGCCCTCGCCGGCCTGCCCCCCAAACCCGAACCTATTTTAATTAGTAAAACATG
CTAAATTTTCGTAGTTCGATTGGCATGTAATGATGAACTCTCCTATGCTATGGTCTAATT
TGATATGTCATATATGAACTATGAAGTATGAAGTAGGGGTGTTGATCACACTGCATTGAT
ATCATACGGATTCGGAGGTTTGCATATGATTGTGACGGTTAGACACGGACATTTGAGTGG
TTGACGTCCACTGATATATAAGGTTTCATATTATACAAGTACCATTGTAGATGTTCCTAG
GTTTTCTATTTTTGCGTGGACAAGCATTAGTCGATGTGTCCATTTCCATTACAGGGTCCA
CTTATTTTTCCTCGACATAAAGTTGACATTGATCTCGCCTTGCTAGCATAAAGCAATGTC
GATGTGCAGGAGTCAAAACAAGCAACACACCGATGTACAACTGATTCTCGAAAAAGAAAA
AGAAAAACAATGTACAACTCCAGCATACCACCTTATCCCCAAGAACCACCTGAAAACGGG
TTTTTTATGAACCTCGCATAGAGCAAGTATAATAAGGGCATGTCCGGGTTTGATCCTCGT
TCCTTTTCCTTCACATTGTGAAGATACCCCATATCTTTTAATAGGCTGAGGTATTTGATA
ACAATATAAACAGCACGGACACACGAAAAAAGCTCAGAATTTTCAGGAAGAAATTCATAA
TCATAGGGCGTCACATATTATGAAAAAAAAAAGGATACTGAATGGTTGCACAATAAGCCA
GAAATATGGCACTGGACTGCAAATTTTCTATTATTGATAGTTGGACATGTCTATGTTGTA
GGATGCCAAACTACACTATTTGTCACTATTCTCTAACACATTTCCCACCACTGCGTACTT
TCTTTGCCACATTCCCCACCACTCTCGTACTAGTCATAAGCAATGCAACTATGGTGTGTG
TTTTTAACTTTATTAAAGAACTTGACGGTCAAAAGGATAGTGCAAACAATACACAGACCG
TTAAAACTAGTGCTGATAAAGCTATTTCAAAGCACAGGCCAAATGATAATGATATCAAGC
ATTGAGGACACATAATAAAACATATACACGACTCTGGAACGATACATATACAATCAGCAT
GGCCAATATAAGAAAGCTTTGAAAAACTTGTGTAGTGACGGCTGTTGTTCAATTGAAATC
AAAAATTGATTATTGCTAAATACACAGGCTACAGAGACCAGCCGGCATTGTTGATTCTAG
TTTAGAAGACCAAGATTATTCGCCTCATCACCTCCTTCTGTGCTGGTGAGCCATCTTCTC
GGCATGGGCCTTCCTGTCAGCATGAGCTTTCCTATCGGCATACATCGGAAGGCTACTGAT
TTCATTCATCTCGGCCAGGAGCTTGTCTTCAGTAATATTATCCGTGATGCTCCTCATCAC
CTGTCCATATATATTACAACAAGACAATGGAAATTGTAAGATTGTATATGGTGATTATGT
TTCTCATACTCTTGATGTCTACACAGCAGGAGATGAAGTAAAATTGCACAGTGGATTATG
TAATTTATGAAGAATAGCCGCCAATAGGAAGAAAGGCAAAATGCAATCACAATAAATATA
TTAAATTGGAGAGCTCAAAATTTATCAACCATCATTTGACTATTATTAGTAAAACATTAT
GAATTGTGTACCAGACTGCAAATGACAACCTAACCATGAAAGGTGGACTCATCAAACAAA
ACTGTACGTCTTGATTAATTTAGTAATGACATGATTCTCACGAATGCAAAATGACAATCA
TCTGTCATTTGGATGTAGTCCGCAACAATCAAGACTGGGAATGGTCACTAGCCAGTTTAG
GAAAGGGACATTAAGAGCAGAAGAGAGCATGTTGAATTATGAAGACAATGTACTACCCCC
TCTGTAAACTAATATAAGATCTTTTAGATCACTACTTTACAGAGGGAGCACAAAACTATG
CGCCACATGGATAATTTCTCTATAACTTGGATCACCAAGATACCAAACTTTGTAGGTGTG
CATAACATGTATTGGATGACCTCGATACTGACACTACTTTTCAGCATGATTTGGTTCAGG
AAATCAAGCATGGGCAGAGAGAGTGAGGGAGAGAGAGAGGGAAATGCCTTTCTGTAAGTA
TTGATATCATTAGGAGTTGATTTATCTGCTCGGATGCGCATGCAGAACCAGCAGTCCTCC
TGTTTATTCCAAGAGCATTCAACAATTTTCCCTGAGACCGAAGACTGCTCTACATCCTCT
GCAGAAGTTCCAACACACCACCAATATTAAGTCCAAAATAAAATCACATGATCACATCAC
AGCAAAATTGTTGCTACAAGAATTGAGACATGATGCCTCGTGAAAACACTGAAGTAGTGG
CAGATTCTATTTGAAGACAACATCATACAAAAGCCATAGTTGAGGACTTCCAAGTTAGCA
GGTATGTCAAGATTCTGAAACACTCAATCAAGTGTATTACAAAAATAGCAACGCTGCATG
ATTATGCTAGGGAATGATTTAAAGAAGTATTACAAACCCATCCTTACCAGGAAATACAAT
TCGGGTACCATCCATAAGTTTCTTTTTGCCTCTCTCGTACAGAAAAACCAGCTGACGGTT
TTCACTACCAGTCTGCAGCATTAAGAAATTAGAACAATAACAAATTTGAAAAAAAAAATC
AGCAAGACACATCCATATAAACAGATTCCCCGCCAAAAGTTGTCATGTTTGATACTCAAT
TTAAAATTCAAGAATATGACAAGCCTACAAACCTCAAACAAAAAGTCAACTGAATTCATC
TCTGGGTACTTCCATTTTAAAAGACCTTCATGGGTACGATTCACGTATGGATCATCCCAG
CCCTATTAAGAATAACACATAGAAAAGTCTGGTAAGCGTATAACTAACTTGAAATGCATG
AAGAAATACATGAACTGAAAACAACAGCTACATGGAAGCAGCTTTAGCTAAGTTTTCTCA
AGTGACACAAAAGTTCATTCTAGCCAATATGTAACTAGTGACTCATCAAAAAGTCAAACA
TAGTGCCTTGTTAAGGAAATCAGAGCTAGGGCAAGGTATGCCCTTGAATGAACTGAAGCT
ACTTTCAGTGCACGAGTGTTCCTAACTGCATGACATTCGCATGCTCTAGGGCAAGATTTA
TATGGATGATAAAGGATGATTGCTCTTACTATAAATCAAGCTCATTGTTACTTCCATGTC
ACGGGAAACATCGTCATTAGTATGCAGGAACCTAAACTTGAAACACAACCACTTCTAGAA
CCAGTTCAGCGATAACGCCAGTTCAACAATAAGAACCGGATGACCACAACCCCCACCAGT
CATAATTCAGATCAACATTTTTTTACTAATTTTAAGAAAAAGAGGACATAGTATGATAAA
ATTGAAGCCAGAAACAGTGTAAAAAAACTGTTCTTAATCTACAATACAAAGGTAAGTACA
CTGATCTGTATATAACTTTTTCTCAACTGCCTTATAAAATATAGTACAGTGTTCAAGAAA
GCGTTTTTAAGCGCGCTGAGCGATGGCAAAGTGCTTCGCTTTTGCCCTAAGCGGTAGATT
AAGCGGGTTTTTTTAATTTGGCCAGAATTTGACTGTTTTTTGAACTACTTTTGCTTGTCT
GCTTGCGCAATAATGGCAATATCCCATTTATCTTATTATTAGGCTCTGTTTGGGAA