Contig Data
morexGenes
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Map Locations of contig_1592589 (2374 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1592589

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20974 1 884 bp None Not available Available None
MLOC_20975 1 1952 bp None Available Available LOC_Os09g25640.2, FRAME:-2, EVALUE:3e-67, 13109.m02457 protein 5-nucleotidase domain-containing protein, putative, expressed





CDS Structure of MLOC_20974






CDS Structure of MLOC_20975






Contig Sequence (2374 bp)

>contig_1592589 2374 assembly3_WGSMorex_rbca.fasta
TTTTACTTCGTATGTAGTCTATAGTGAAATNNNNNNNNNNNNNNNTATTTAGGAACAGAG
GGAGTATTAGCAAAGATCACTGGATGGCACTATGTGAATATTTTACATATCTTGAAAAAC
AACAGAAGATTAACAAGATGGATATGCCAGCACTTTTATTGACAACCATTACAGATGATT
GTTACGTTGCCTGGATGTATTTAGAAGACACGCATAGTTGAAACAAGCTGGAGCAGCCAC
TGAGAGTAAAGCTCATCATACAGCGATATTATACAAAAGAATCGCCTACTCACTTGGACG
ATGGTTCTTACATCAGTCAAGAATATGCACATCATGCCTGGCCTATTCAGTTGGATCCAG
TCTGCTGGTTTCTTCATAACCTAGCCGAATGCAGTGACAGGGCTCCCATGGCCAGACAGA
AAAAACACTGTGTCTTGCACTACTACCATGGTTCTCCCCAAGAAATGGATACCCTGAACT
ATTATGAGCCATTGAACAAACTCGCTGGCACCTACAACAGGAAATGTTCAAGAAATCATT
CTAAGATCAGTAGCATATCAATTTATTAGTATTTCAAAATAACAAAAATGTAACAGCACT
AAAAAATCAAGCCAGCTATCTCAATGGAGAAAAGAGTTGACAGATTATGCCTTTAATTTC
ATGGAAATTTCTAGAGTCCCCCCACCCCCACCCCCCAAAAAAATTCCAATTTTGTTTCTT
AAGCAGTAGGAAGCCAAAAATAGAATGCTATCATCTTGGTGTTGCCTGTAAGAAACATAT
ATCGAAATAAACTGAACAGGTGAATACCGCATAAGTGGGACAATTTAAGCTACCTTTGCA
TTATGTGGCATGATCTTTATATCGTGAGGTGGATGAAGCCATGATTCAGGGGCATATGAC
AAGAAGTTCTCGAGCTTGCTGGTGTAGATATCTGCATATTGATGAATGTGATAGGCAAAT
GATGATTCCTTTCCTGTGTCTGTAAGGAATGTTGCACCAAAAGAACTATTAAACAGATCT
CGCATGCCAGATCGACATTGGCGCCTTTCTGCATTCAACTCATCAAGCAATGTTCTGTAA
ACTTGGCCTTTCTCAGTGCTAACCACAGTTGCATGAACTTTCCCAAGTAGATCGTGTATT
ATACCTAATTTTGCCTGCAGTGTAGGATAAATTCCAGGCAATTTGATAAAGCACCAATAT
GAAGTGGATGGAATAACATGGACTACGAAATTGTATATTTAATAGAATAATTAGCATACT
AATGAATACAAATAGTACTGCCATATGTCTGATGGACCAATTTGTGGGTCTCTGTGCCAT
GTTTAGAGGATATGTACCAGTAGGAGTGTAGGATAGACCTTTAGGTTTTACCTCCACACT
CCCCAGGTGCCATATGAAACTTCAGACAGCCGTTATAACTTCCACAAATAACTACTGCCT
AAGCAAGTCTCCTAAACACTTACCTTAATAAAAACCTCCTAAACATAATTCCATAAGTTG
ATACAGTCAACCCTATTAGTTTTACTGATATATATTTATTAGTTTCCTTCTTAGTTCTGA
TGCCAAATTCACAATATTTTGTGTAAATTTGGAGGGAACAACCGTTATTTGCAACTGCAA
ATGATAGTAACAGTAGTGCTGAGTTCGAAGAACTGATGATAAATTATAGGTGATCACATA
CTAGAATGTAGGAGCCATTCCATACTAGGATGTAACTGCTAATCTATATGAAACAGAACT
TGCATGTACCTGCTATTTTGCAGACCAGATAACAAATTTATTGAGATATGATATTTACTA
TCTTATCTAGATACTATGTGTAAAGAGATGATTATTGGGATCTGTATTACTTTATATTTT
GGCTTAAAGTTTTCCTTTATTTAATCCAGCTAGGCATTGTATTGAATATTGGCCCTTCAA
ATACTATTTATATTATACAGCTGTGACGTGTCTTAGTTCTTTGGGTCAATTGCCGCATTG
GGGAGGGCCAGAGGGCGTAGGAAAGGCTGAAGAGAAGAGATCTTAGGAGAAAGATGACAC
TATGCACTGGCTGACTAGGTGGAGATCTTCATGCCTAATGCCAACGATCACAATAGCCCT
TCATAGATAGAGGCTCTCCTAATTATAGACAGGTCAGTCTATTAATAACAATCCTAACAT
ATGAACTAGTGAGATAAGATACCAGCTAATACAAAGAGTTGATGAGCAAGTTGTTGTTGC
CGCTAGCTCGAGCAGGTGAGGTGTTATGGTCGGACTCCAGTATGCACCGAAGAGGCCCAA
TAGTGGGACGCATTAGGGGCTTAGCCCAAGTTATCTAGGGTTTAGTGGAGGATGTCCTTC
TATATAAACACATGTACCCCTTCGATATTAATCA