Map Locations of contig_159216 (3627 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_159216

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20884 1 992 bp AK365087 Available Available None





CDS Structure of MLOC_20884






Contig Sequence (3627 bp)

>contig_159216 3627 assembly3_WGSMorex_rbca.fasta
AAAAAAATTTTATTTTTTTTTTTATTTTTTTTTTTAAAATTTTGAGATACCCCCCCCCCC
CCCTAACCATTATTAAAAATGCCTATTTATTCCATTTCATGTTAGGTGCCAATGATAGGA
TATTAGGATTGTAGCATTAGTCAGACGACCTTCATTACAGCTAAACAAGCCTGCCATTTC
TAAAGCAAGATCTATAGTTGAATGAATAGCTGTAGTTCCACCAGTTCTTTAGTTTTATAT
ATGCAGATCTTCCATTGCACTACATTTATTAATTATTACTGTATCTTCTTTCTTGCTTTA
TTTAAGAAGTGCCCTTTCTTGACAATGCAGGTATGCCATGACTGGCCAGCTAACTCAGAA
AAGTGATGTATATAGCTTTGGAGTTGTTCTTTTAGAGCTTCTAACAGGAAGGAAACCAGT
AGATCATACAATGCCTAGAGGCCAGCAGAGTCTGGTTACATGGGTAAGTATTTGGTTCCT
AACAATCTGACAGTACTATATTTGTTTGCCAACTACGACTTGATGATACAGAGAACTGCT
TTATTTACAATATTATTCTAAATAAAACGACGAAAGCATGCATTAGCAACAAGATTCTAG
GGCATAAACACCGAAGAACTCAACGGTTTGAACTTCAGAGTCTCAGACTAGACTGCAACA
ACATGTAAACAAACATAAAAAAATTAAAAAAATTTACTGTTTTTGTTCTATGTCCCCCTG
TTCAGGGTGCTTACCTTGTGTTCATGTACTATTGGTTTACATAACAAAACTATTCTAAGT
TGTCTGCTTTGGATATTTCTGATTGGTCCCTACTACCTTCTGTGGACACAGGCGACGCCT
CGTTTGACTGAGGATACAGTGAAGCAATGTATTGACCCAAGGTTGAAGGGAGAGTGCCCC
CCGAAAGGCGTTGCCAAGGTCTGTCTCTCTTCTTCCCTCCCTTCTATGTTGCACACTTCC
TCTCTTGCACGGTCACTAGCTAAGAAACAGCTCGAGACGAATTTGAACACTGAATGTTTC
ATCTGCTGTGGAATGCAGCTTGCGGCGGTGGCTGCCCTCTGCGTGCAGTACGAATCGGAG
TTCAGACCCAGCATGAGCATCGTCGTCAAGGCGCTCTCGCCCCTTCTTCAGCAGAAACCT
CAAGCTCCACCAGCGGCTGCTCCCAACACAGCGACTTCAGACGCCTGACCTACCCAGTTC
AACAAACAAGGATGTAAAAAAAAGAGAGTGCCAAGACACATGTTGTTCTGTTTTTACCGA
GAGTACCACCGTCGCTTTGCTGAGTTCTAGAACGGACCGTGTGATTCTGCCGAGTGATGC
GCTCTTGCTGCATTTGTTGGCGGTCACCTTAATAAGCTGTGTTCTGGGTGGTATATATGG
ATATGCTGTAACATGGGAACTTGGGAAGGTTGTAGTTGGTCCGTGGCTTGATGTTTCTGG
GTTTGCCGTTGTGATTTTGAGCCGACACCCATTGATTTGTATAACCTGCTGAACTCGAAG
TTGGTGTGAGATGTGAGAAATGGTAACATTATTGTCCATTTTTGTTATCTGCTTGTCCGC
TCCGAATTATGCGAGACTGGGTTGCTGCTGCTGTTGGCCTCTCGGGTAGGCAAATTTCCG
CAGAAATCCTGGAGAATTTTCTGTTTTGTATCTATCTCATGTAAATAGGTTGAATTTATC
CGAGCACCTGTGATGCGTTGTAATGCTGGTGTTCTATATCATAAAAAACATGGTACACGT
TAAATTGAAAAGAACGCTAGCCTTTGCACAGATGCTTGATACCAATGTTCGTCATCCACC
TCCGGCACTACCATAGCAGATACCAAAGGAAAAAAAAATGATAGATCATCTTTTCACCCA
ACCTCGACACAGTTTCATCAATGATATGTAGCTTTGTGGACCTTTAAGATGACTCACCTT
TGACGAAGTCATTACCGTTGAATGAATCAGACCGGGAAAACACTCCAGACATGCAATCGA
ACTTCAAATCTGACACCCCTAAACAACTAAGACGTCGAGAGAGGAAACCACACTTTCCCG
CAACGAACCATTAACCCAGCACACGATCCGCCGAGGACACAAGTCCACCACGAGGATGAT
GTCATCACACAATCCTTACTTGAACAAACCGGTTTTTTAATTCATCCCCAAACAAAAGAT
CGCCTCGTCAAGGAAGGATCTAAAAATTCTTTATTTAGTGTTGTCATTGCCTTCGCCAAA
GCGAAGACGATGAACAACCAAAAAAGCTAAGCTACTAATGACTAAAACGATCCGCATACG
TGGACCCGACGATCCCCCTCACCATTGACGACCGTGGTCGTCAGGGGAGGGGAGCCGCCA
GAGGACGGCAACGGAGTGAACGGTAATGCCAGTGTCCAGTGAGATGATAGTGCAATACAT
GCGTAAATTGTATGAATTTGGCATTTCTTTTTGAGAAACACGAATTTGACAGCTTTTTGT
TTTTTTAGGATCACGAATTTGGCAGCTTGTACTGTTGTACTCGCTAAAATAAGAAAATGG
AAACGTTTTCCGCGCATGCGCCGGCCGAACGTTCGACCAGACACAAGCGTATCATCGATC
TTTTTTTTTATTCTGCGATCTTCTCCCCATCACGACGACTCGCATGTGGTGCGGCGCATG
GTCGAAGGGGCCCACCATCTGCGCGCCCCTGCGCTGCTGCCGCCGTTGTGCCGGTCCCTG
CCCCCATCGGCCCGCCCGGATCGCCAGTTCCTGCCACCGTCGATCGTCCGCATCGTCGGA
TCTAGACTTCGCCCGTCTTCCTCGTCGCCTGCCGTCATGATCGGGCGCGCGTATACAAGT
GTTACAAACGTCACCCAAATTTGCTGCAACGACTATTTGAAAAAACTTCAAAACCCAAAA
TGAAAAAGCTTCAACCAGGCATATGATAAGCTACAATCGGTCATTTGCCATGACGGAATG
CTGCAACCGTTGATTAAAAAAGCTGCAATCATACATATAAAAAGCTGCAAGCGGTCATTG
CCATGGCGAAATGCTGCAACCGTTGACATAAAATGCTACAACCGTTGATGAAGAAAGCTG
CAACCAGACATGTAAAAGCTGCAGGCGGTCATTGCTATGGCGAAATGCTGCAACCGTTGA
CATAAAATGCTACAACCGTTGATAAAAAAGTTATAACGAAGGACCGACAAGACGCTCGCG
TTTGTTGGCTCTGCAAGGACGACGATCGGCGGCGAGGACGTTCGACGAGAGAGGGCGACG
GGAGAAGGACCCCTCGACCGCCAGGGGGCAGGGGGAAGGGGAGGGGCAGGGGGAGCATCG
CTGTGCGCTGGACGAGGATGACCGGCGAGGTGCTCGCGTTCGTGGCTCGAGGTTAAAGGA
CCCAGACGAGATCTGACGATTCAAGAACCCCCGATCCGACGGCTGCTGTGTGACCGGCCC
GAGCGCTCGCGCGGGGGCGCGGGCCGCCCATAAGAAATTGCGTTTGGAGTTCGAAACTGG
TGGCCTGCTGCCTACTTTGGTCTGGTTGCCACGGTGTGAACTCCAGGCCGCTACACCGAC
CGAGCCAACCTGCCGATCCGGTCCGGCCCATCTCTTCCCCTGGCCCTCCTGCGCAGCCGC
GGCCCCAGCTCCCTCTCTCTCTCTCCC