Map Locations of contig_1592145 (3276 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1592145

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20879 1 1593 bp AK360437 Available Available None





CDS Structure of MLOC_20879






Contig Sequence (3276 bp)

>contig_1592145 3276 assembly3_WGSMorex_rbca.fasta
TGGAAGCTTGCTATCCATGTGCCAGTTGGTCACGAGATCTTATGGGTTTCACCTCNNNNN
NNNNCCAACTTGTTTGGGACTAAAGACTTTGTTGTTGTTGTTGTTAGCTATGCATAAATT
ATGTTTTTTCGAGCAACCAATAGGAGCGCTGCCTTTTCATTATGATGTTTGTGACAACAA
GAAGTTCAATCATGTAAGCAGGTGTTATTCTCGTGTGCGAGTTGGATGTAGTCATGTCCG
TTGTTACAGAAGGCGCAGCTCAAGGAACCTATGGAGCTTGGAGCCAAGCGGCTTGAATGT
ATTACCAAGGGGTTTATGTCCCGGTTTGGATGGCGTGCCATTGATAGGTTTGTTAGTCTC
TGCATCTATGATGGAGGGGCCGGGGCAATAAGGCGTCCATTATCGAAAAAATAAATAAAA
GTTCAACTGGTCAAGATTTCAAATGATATGGCATCTGAATGCATTTTTTTTTACGATATT
TTTAGAAATAGATATTTAACAGTGTTGATTTTTCCTATAGAAACAAAATAAGGATTAGGA
AACTTACCTCTAAAATGTCATCTTCTCCGACAAATCCAAATGGAACGACTGTAACACCAA
ACCTTGCCGCCATCCTTACAAATTCTGGCTGTTCTGGCCAAAACAACTTGTATTCTTCAC
CCTGCCAAACCCAGCTCAATTATTACATTAGAAAAGGCGGGCGGACGTAAAATCTACTAG
GCTTACTCTCAAATACCATTCTTTTGTCTGTGTTTTAAGTGGCGGCCCTTGTGGAATACT
TAGTTACACACTAACCATGATCATACTATTTTTGTACATGTGAGCACACTCCTAATAACA
AAAGCTGATGTGCTAAATTAGTTGTTTACAAAAATAGTTCTGTGTGGTGAAACTCTTAAG
AGCATCTTTGGAAGAGTAGTATTCTATCCTAAACTTTAGGAATATAGTTCAAATTTGACT
AATACCAGTTCTTTACCAAGAGTTTTTTTGAAATGGTTTACCAAGAACTATCTCCTAAAC
TGCTCATAATGTTTTCGCAGAACCTGCCCCTAATGGCCATGCCAAGGCTTAATAGAGATA
TGGTGACATTAAGCATACCTTCCTATGTAGAGCTTCCCGAGCACCACCAGGATAGAGGAG
AACATATTGATTTCTCTCAAAAAGCCTGTACATATTGATTGGAGTGACTGGTAATCCGCC
ATACATAGAGACTGTATCAAACCGAGACAACTCCTGGCGCGAGGTCTCATAATTTGATCC
AAACAAGATTGGATGAGCCATGCCACGAACAATCGTGTTTTTCTCCTTCAAAAACTCTTC
ATACAATGGGCTTAACTCGATCCCCATCAGTGCATGGTAACCCACAAACAAGACAGGACC
TTGGTCAGGAACACCAGCGAGGCCACGGACAATTTTTCCATTTGCCAGAGTAGACATCAT
AACTGGGCTCAGTGCAAGGTGAAACAATCTGCAAAAGGTTATAGGTTTTTCACTTACTAG
ATCTATGCAAATAGGGAAGCACTCTCAGAAGTTGAATACGTACTTGTTGTCTTCATCAAA
TGTTTTCTTGAACTCACTTATTGTAGGGGGAAGGTAGTCGGTCACAAAGTCCCGTTGCCT
GCCACGGCGGTACATATTTGCACCTTTTATAACAGATAACAGATTCACACCATCCTCCTG
TGCAAGAAAGACATGAATTTCGAAATTGTACACCAGAAAATACAGTGCTTGTCATGAATA
TTATAAATGAAAATATCGGACTGGCCGCGAAACTTTTGATGAATTGCGAGTGTACCAAGA
GTAGTGTATGGCCATTGTCCTTGAAGTATCGAACCCTGCAGTTTTTCAGTGCCTTGAAGA
GTCGATCCGCCTCTTCTCCACTCGGAAGAAGATTGTCTTTGCCACTAAATAAATTAATAT
GGACAGTATCAGACCAAACAGTTAGACATAGAATGTCAATCGAGACTAGAGAATGAGAAC
TTAGACGGCACCATTATAGTGAGTACCTGGCAATAAACAGAACTTCAGCTTGTACAGCAT
GAAGACGAGAGTTCGCATAGGCTGCTCCTGACTTAAGAAGCTTGAGCTTCCACAAAAGAG
CATCCCTTGGTATGATATCTGCCAATTGCTGTTAAACGAAAGGGATGAAATCTAAAATAA
TAAGAAGAAAATATTTCTAGGTGATTAAATAGCTATATAAGAGGATATAAATGATTCATC
ACAGGACTAAGAGCACAAAAAGGACTTCTGAAAATAGTGACATAATGAAATGAATACTTT
TCCTTTCTAACAAATGCAATTGTTCCCTAAAAAAAAGCAACTGCAGCCTCATGTTTTTTC
TAGACGTTCAAAAACATTTTCTATAGTAGAGATCTCCTGAAAAAGATCTACTCCCTCCGT
TCCTAAATACAAGTCATTTTAGAGATTCGGATGTATATAGACATACTTTAGAGTATAGAT
TACTCATTTTACGTCGTAGTGGAATCTCTAAAAAGACTTNNATTTAGGAACGGAGGGAGT
AGGAAGCAAGTCTGTTTAACTAACATTGGCAGATAGAGTAACAGTAGACCAAGTAACGTT
TAGGAAGTTTATAACAATATATTTGAATAGGAGGTCACATAAAAATGAGTGTGTGGGATA
GACAGAAGAGAAACTTAAAAAGAGGAGGAGTTATGGAAACATACTGAAAGCAAAGGCAGC
AAGGAAGTGAGACTTTCTGACAGCTTTTGAAGAGTTTCTGGAGGAGAAAGGTTGTTCTCA
ATGCTAACCATAGCCATCTTCAGAGGGTCAGCTGCTCATAAACATTTTTGGCTCATCAAA
AATAAGTGGAACAAGATATAAATTTTAAAAGTACATGCAGCGAGGTAAAATTCTGCCTGG
ATATGCTTTTATTGTCAAGCAATAACTCAAACTGAAGAACATGTATTCCAAGTTCTTTAG
TTCATATGAAAATAATTAGAAAAAAATGTGACAAGCATATCAGATCAGACAGTTGGAAAA
ATGATGGACAGAACAACTGGAATAAAGTACAGATCAGGTAATTAACAAGCTAGAAAGCAT
ACCCATAACAAAACTAAGAAGGTACGGAACTGTAACATGAAGGTCGCTTGGCATTGCTTC
CAAAAGGGGCAATATTGGCTGCAATGGAGTCCTTGCAAATGATGTTGCTGCAGAAAAAAG
AAACATCAGGTTATTTTATACTCCCTCCGTCCCAAATAAGTGACTCAAAAGTGACTCTAC
TTTGTACTAAAGTTAGTACAAAACCGAGTCATTTTT