Contig Data
morexGenes
Links



Map Locations of contig_1592086 (3321 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1592086

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20867 1 1080 bp MLOC_20867.1 Available Available LOC_Os02g33430.1, FRAME:-1, EVALUE:4e-29, 13102.m03623 protein E2F family transcription factor protein, putative, expressed





CDS Structure of MLOC_20867






Contig Sequence (3321 bp)

>contig_1592086 3321 assembly3_WGSMorex_rbca.fasta
GATAGCTGGCAACGGGAGGCCCCACGGGGCCCCCCCCCCCCCCGCTACAACTCTTGTGTT
GCCTGAGTTTGAAGATGGTCGTGTCGTGCCTGCCCCTGCCAAAGTTCTTTGTGGCAGCCT
ACGTAGTGGTGTCAAGCAGATTTAGTTCCAATGGTGGGTACTTCTGAAGATGACACACCC
TGGGAGCTGTTTGACGAGTTCACTGCTCGCTTTTCCCTCCTTCCAACTCGAGGACGAGCT
GCTTTTCGAGAAGGGGAGTGATGTTTATGTGGGGGCAGACTTATAGCTGTAGGGCCAAAT
CTAATTAGCTAAAAACTTCATAGTCTGAATAGATAAAGAGAGAAAGAGTCCAGATTGTAA
TCAGTTTAGTTTTGCCTTGATGGCCAAGTTAGTTCTCCTATAAGAAGGGACTTAATCCCG
ATGAAAAAAGCAAGCCAATGCAGAGTATTTACTTTACCATAGCTGCCTAGAGTAACTAGA
AATTCGAGTTCTTCCAGAATGCTAAATTGTAACATCTCATCCTACATAATCATATAGATG
GAGAATATTGTCATCACCTAACGAACTGTCATAGCGGCAAGTACCAGCAGGAGTTGATGG
ATTGAGTGGTGAGCCTGTACATAAAAAGATGTGCATGTTTAATCTTTTGTTGCCTGAATA
CATAGGCAAAAAAGAGTTTGGACTTCAGAGCAAATGGCACTAAAGAAGTTTTCACTTACC
AACATTTGGCGTAGGTGTCTGAGGCCCAGCTTTATTGTTCTTAGCCTTTGATTTAGAATT
CTTAACAGCTTTTCCGGAGACTGGGGTGAGTAGTGGATTGCCAGTAACTCCAGTGGTGAC
AATCATACAGTCACTCGACTCAGTCACATTATTTTCTTCACGTGTGGCTTTTCTTTTTAG
CTGCAGAAGAGGGTGTTATATAATGGTAAGACAGACTAGCTGACGTCCAGCAAGGATGTC
TATCATTAACTATTACAGATTTGGAGAAAATGCATCAGCTAAATCACACACAAAATCCTA
TGTCCTGAAAGCAGAATTCCTGAATGTAACCTAGAAGAAACACAAAGAACTAGGAGTAAT
TGGCATCTCCATAGTGGCACTATATAATTTTACTGCACAATTGAACCTAATTTTATACAC
TTAGAATCCACATAGAGACAACTTTGACAGTGGTATTACAATGACAGAATCGCATGCAAA
AACACAAGTGTATTGTGAAACGAGTAAACAGCTTGTAAAAATGAGAGCTGAAGCATGTAT
TTGCAGCAAACAATTAGCATAAAAGATACCAGCATAAGAATCCTTCAACAGTAATGACAG
TCAAAATAGTTACCTACGTTATGTGATAATCCCAAAGTTCAAAAAAGCTCTAGGCGTTAA
TTATGCGTTTGGCCACCTACTTGCGCTTTTCTAGCTTAGGCGTGATTAGGTGAAATTGGG
CGCAATTAGGCGTTAGTACTGCAGGATGAAGAAATAAGCTAGATGGGCTGGCCTAGCCCA
TTAAACCACAGGCCCATCTTCATATCCTCCTATTAAAGCTCTTGTATGGTGCAGTCAACA
GGAAATTTAGATTTCCTCCTCACGTCGCCTCTTCCCCTCGTCCTCTCTCCCTTGCTACAT
GAGGCTGCTTCTCTCCCTCTTCCTCTGTCCCTTGCCAGAGAAGCTAGATCCCTCGCCGGA
GAAGCTGATCCCTCGCCGGAATCAGTCAATTTGTCGTCGGAGTAGCTGAATCCCTCGTCG
GCTAGGATTAATCCTCGCAGGGGAGGTAGGATCCTCACGGGGCAGATTGATTTCTCGCCT
GAGAAACATGATTCCTTGCCGGAGAGACTGATATCTCGCCGGAGGACCTCGCCGGACGCT
TTTTTGAGCGCCTTGGGCCAAAGCGAGGTGCTAGGCCAATGCCCAGCGCTTAAGCGCGCC
TAGGCGAGCGCCTAATAGCACTTTTTTGAACAGTGGATAATCCTACACCAAACTAGTTCA
TTAGATTCAGAGTATTTATAGACCATTGAAACAGTGTAGCCTATGACTAGTTGAAGCTTT
GACCTAAACTTTATTCAGTTGAGGGCAATAAAATGTACATGATAACTATCTCCCTATCAG
AGATGCATGTCTTCAACAGTTGGTAGTTCGAGCTTGCACAGAATCAGGTATAAGCGGCAA
ATGGAACTCAGCTGCTCTTCACTGTTACTTGCTGAAATTTGTTCAGTTGATGATATTATA
TTATTATTAAACTGCTCGAGGTGCTAGACACACATGTTGCATCCAGTCATCCATCATACA
GGCTGCAGAGAAGGGTTGAGCACCCAAAACATACATATACCAACATAAACCGATCAATCG
TTTCTGTTCGGGCTCAAACGAATTTTTGCAGAGCAAAGAATACATATAAATTGCGGTTCA
ACTAATTCTTACTGCCAGCCATGCCATGCCATGCGGAAGCAGTTGGCAAGTATTAATGGG
ACTATATATTATTACCATATGTTGCCTAAGTATCTGTTTATTCAGGACCTCGCTGCAGGC
AACATGTACATGTACAGGTGACAGAACTCTTCCTCTTTGTAACATTGAAGATTTGACAGA
CCATTCCAATTCTTGCTGTGGCACGACAACAACAACATGACATGAATATTTATTTTGCGG
ATCCACGTCACACAATTAACATAGTCCATGTTTATCTAACTTGTAAATGATTGTAGGCAC
TGGGCATTCAAGCTTCCGAAAACAGAGACAACTTTGGGGAGGACAAGAAATTGAGAAAAA
ATAAGGAATCTGCAAGTGGATCCTTAAGATATACTCAAATCAGCACATACACCCAACAAA
ACCCTCAAGCTCAGCAACCATTTGGTGTCTACAAAAACAGCTCAAATCACGCACAAGCTC
AGCAACACCAGCAAAAAAAAAACAGAAACGGATAAATCGAGAGCTCCTTGTGGAGCACAA
GTATCTCACCTGCGTCCGGATAACAAGCCTCTCATCAATATCGCCGCCAACACCACCGGC
GCCGATGCCGCCTGAGCCGGAGGCAGAAGGGGTAGTCGGCGCATGAAAGCGATGGTAGTC
GTCGGGTGAGGCGAAGGGAGGCCGCGATGGTGTGGAGAACACCGGGGGTGGGCGCAGCGA
CTGCAGGATTTTCTGAGCAGCCGGCGGCCTGCCGCCCCCCGACATAAGCCCGATCTCGCG
ATCGCGCGCTGCGGGACCCCCAACTCCCGGGAGTGATGGGCGGCTTCGGCTTCAGAGAAG
ACAGGAGGGCATCGGGGGGACCGCCGGAGGCGGGGTTCCGGCGGCGGCGGGGGGCGGGGG
CGGGGGGAGGCGAGTCAGAAA