Contig Data
morexGenes
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Map Locations of contig_1592035 (2980 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1592035

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20857 1 155 bp AK370075 Not available Available None
MLOC_20858 1 811 bp AK364106 Not available Available None





CDS Structure of MLOC_20857






CDS Structure of MLOC_20858






Contig Sequence (2980 bp)

>contig_1592035 2980 assembly3_WGSMorex_rbca.fasta
CCCGGCCGGCAACGAGGCGTCGTCCGCCGACGGCTGAGGCCCCGGGATCTCGCGCGCCGG
CGCCATGGGGGCGGCGGAGCGGGCTGGGGCGTTTGCTTCCGCTGTTTCCTTTGTTGGCCG
CTCTTTGCTCACAGCCCCTTTGATGTGTAAATGGCTGTTGGAGCTCGTTTGAACAGAGAA
ATCAACCTTTTATGTTTTAAAAAATCGTGAAAAAATATACTCGCTCTGTTTTTACATATA
AATCTTTTACAGATTTTAATAAAAACCACATACAGATGTATATAGCGTATTTTAGAGTAA
ATATTCTTATTTTTCTCTGTATGTAATCTTAGATTTTTTTTAAATTTAATAGGAGTGTAT
AGAAAGAAGGGAGTAGTACATTTAAAGGCTTTTTTGATTCATAGGACTCAAAAAATGCGA
GAAAAATGAAAACACATAGGCCTCCTTTCATTTACAGAATAATCATGTAGGAATCCTGAA
GGATAGAAATTTTGTAGAAAAAAAATCTTAAACCCATTGGTTAGAAATGAATTCGTCTCT
ATATAGGATAGGGATTAATCCTTAGATTTCAAAGAAGAAATATATATTAGCCTAGACTCA
ATGAACAAATTCCTATTCTATGAATCAAATGACATCTCTTCGCTCTCAGTTCTTAAGGTT
CTCTTGTTTCCATTATATAAATCAAGGAAGATCATAGGATTGAAATGTCATACTCATCTC
CATGCTACATAATTTTGGTTTGTTTGGTTGTATCATAGAAAAAACAAAGGTTTATTTCAA
AGAGGTTTGAGTGGATGCTAGAATTCCTACTAATAAATCCTTAGAAAAGATTCTTATGGG
ATTCGATCCTATAAATCAAACAACCAACATAGGAAAAAAATCATTTGAATTATAATCCTC
CAAATTTCTATGAAAATCCTCTGAATCAAAGGAGCCCTAAGTATGGACGTATACTGCATG
TTTGTAAAGTTTCTATGATGAAATATGTTTGTATGTGAGACACACACAAAAAAGCATGGT
ATCGCATCAAAACATATTTCATCCCTAATATGTGGAGTATTTTTTCAACCTTAAAAAAGG
ATTCACTCCTGGCCAAATTATTTTTAACAGGCAACTTATTTGTAAGCTTTGAGTAGATTT
ATAGGTAAAAATGTGAACATTTGAATATAATGGTATTGATTTAGTACCGTAAGTTGATAA
TTTTCTATAAACTTAGTCAAAATTTGGCAACGGAGGGTGCACTCGACTACTCAAGCAACT
CACCGCACTAGCGGAAGCTTATTTAAGAAGCTGATGATGCTCTAGGCCGCCATGGCCACA
TTATTTCTTATTGCTATTCACAACTCAAAATAGGATTTAACTTTAACAATACAACATTCT
GATTCGAAATGGAAAATGTTACAACGTCGGCAATCATCAACATGGCGCTCAGATCGGACG
TGTGGCGAGTCGGTGGGTGAAGCTGATGACGAATGTGCGGATCTCCATGGGCGCCAGCTC
AACAACGAGCTTGGAGGGGTCCACGGGTCCTCCACGGGCCACATTTTCTTTTGGTGGAGG
CCCTGCCACCTTCCATTTCAGCCTCTTCTTCTCCATGGCGGCGCGCTCTTGGTTCGCTGA
TAGGCTTGTTTCAATTATCTTGCCGACCTGGAGCATCAGGATTGGGAAGGGAGTGAGAAC
ATCCATCAAGATCCAATCAAATAAATAAATAAAGTGTAGATTTTAATGGAGATTACCTTT
TTATCTGGGAATACCCTCTTGAGGTCTACACTCGCCAGAGCTGAGAGATCCTTATGCTCT
CCAGCCTATATGCACAGGACAATGTTTACAAAAGGTGCAAAACTGGATCTGACTGGAGCG
AGAGAAAGTAATAAATGGCCAAAGTATGAGACCTCGTATAGGTGAGCCAACCGAAGGAGA
ACACTTCCATCTTCAAGTTCCTGTACAATTCATAGCTGTTTATAACACGCGCATCGAACG
AATCCAGATATCATTTTCATCAATATTCTGTGGTGGTTTGGATAACATTTGTTGCAGCTA
ACTGGCTGACATTACTTGTAACCTCTCAGACCAGCAGGATAAAAAACTAGCTTGCACCAT
TGCAAATTAAATGGTACAGTACTCAGAATTATCAGATCAGCATTCTCTTGCCCAGTACAT
AACGATTTTTTTGTTCATTTTAATGAGATATGATAACAATAGTCCATTCTCCATAGACAT
ACACATACCTCAAGCGTAAGCAACGCGACATTTTCAGGAAGACTGTAAGTTGGATCCATT
GCAGAGAAAGATGAAACATGTGAATTCGCCCAGTTGCCTCCATCCTGGAAAAGCAAGTAG
GGGAATGTTCAATATGACGAGAATAACTGTTTGATCGACCACGAGTGCAACAAAATTTAT
GATGTACCTGCTCTGCGAACGCAAGAAGAAGAGGGGAGTACAGTTCCTGACCAAATGTAC
GACGCCACCTAGCCCCGTCACCTTGTGGGTCAATTTTGAGATAGTATTTTCCTTCAATCT
GTCGATAATGTAATAAGTTGCTTTAGATAATGTTTCTGCACAACATATTGTGTGCTTGCA
AATAATAGAATAAATTGATCTGCTCAACAGGATTTGGTGATATATGTCAACATCTGGCTT
TGAATTCCATCCAAAGCACATGGTCAGAAAGATATTCATTACTTACAACTAGTCCTTCAC
ATTGATCATCCAAACAGACTTTTTCATCTAGTGCTTCCGCAACACCACGACCATCATCGT
TGAGTAGCCTCCTGCACAAGGAGTAAGAAATATTTAACTAAGCAGAGGTAGAAAAAGAAA
AATGTTACAGTATGAAAGAAGCAAGAAAATACTGTGCAACTCTGATTGTGACATGTGTTA
GGAAGTATTAGTATTAGTCTAGGAGTCCTTATTAGTATTAGTATTAGTCTAGGAGTNNNN
NNNNNNNNNNNTTTACTTTCCTTGCACCTCAAGTCATGTG