Contig Data
morexGenes
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Map Locations of contig_1591906 (5562 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1591906

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20815 4 3294 bp MLOC_20815.2 Not available Available LOC_Os03g03610.3, FRAME:-2, EVALUE:0.0, 13103.m12918 protein 1,3-beta-glucan synthase component domain containing protein, expressed
MLOC_20814 1 684 bp AK359005 Not available Available None





CDS Structure of MLOC_20815






CDS Structure of MLOC_20814






Contig Sequence (5562 bp)

>contig_1591906 5562 assembly3_WGSMorex_rbca.fasta
CGCCGCTCAGCTCCCCGCCCGGGCCGCCGCCGGCCGACGCGCCGTCGGAGGCCGCGGATG
ATCACGTCCACAAGGACGTCAAGAAGTCGCCCGCCACCGTCGCCGCGTTGTCGTCGGTCG
GCGCGCTCGCGTGTTCCGCCGTGCTCGCGTCTCTTCTGTGACTGTGAGGGGGTGGGTCCG
GTGAAAGCAGAGAGAGAGCGGTGGCACGTCCCATTCCGTCCCGGCCATATTCATTCCTCG
TCAGGCCATCACATTCTTCTTGTCATCCTCTCCCAGCCATTGATTGCATGAGTCGCAGCT
ATTTCTCCGTGTAATCCATGGAACCGTGTGTACAATACGTACTACATACTCCTACATGTT
GTTCTTTACGCGCTGGTTTGAGAAGCACAATGCCGTTACAGAGAGCAGCTACACCGACAC
AGCCTCGATCGCCATTTCGTGCGCTACATGATAAACAAGGCCCGACGGTACGGCGGCGAC
TTTACACGCTGCACCATGGAATTGTAAATTGTAGTAAATTGGATGGAGCTGAGTAGGCAT
GTGACTTTGCTCTCGAGTTTTGCTCCTTGTCCATGGATCGAGGTCGTCCTTGCTGCTGGG
CAGGCAGCCCCACCACATGCAATGCAACTGGCGCCCATTTGCCGGGCGCTTCAGAATCCG
GGGAGATGAGGCCCAGAACCAGAATAGCCAGCGAGTGCGCCTGCCATGCCATTCCACTCG
CAGCCCGATCCGGATGAGCTGGCGCTGTCAGTTCATACGGATTCCGATCAATTTCACCGG
ACCAGACGACTCAGGACCACCATCTCCTCTGAAAACAATTAACTGCAAGTAGACGAAAAT
ACTACTTTAAACTCTGCAGTAATAACTAAGGACACTTAACACGCACGGATAACTAATCTT
CAGCAGGTAGAGTAAATCAGGTCACGCTGGAGCCACTTTTATTACGGCCGAGAAATTAAG
GCACACACTCTGTCAAGTGTGATAGTAATTGCAGTCGCACAACTGCCGGGAGAAAGAAAT
GATCACCGTAGCACGGGGGGAAAAGGTAACAGGGATGTTGTACCGGTGCTGCATCACATG
ATCAATGTACTCAATGGCCAATGTCCCCAAATCGTGGCCATTGCTAAAATGCCCGTATAA
AAATTTGCTGTAGTATTTACACAAGAAAATGGCAGTATCCGACGACTACGATTCCTTGCA
TCGCAATTAGCAGATATACTATTTCACAACTTGTATACAGTTGTAATCACAGGAAATGTT
CTATATCCTGGAATATTCACAACCTACGTATTCTGAAGTAGCACCATATTGAAAATGGCA
TGCAACTGGGCAAAAGAGCTGAGTTAGTCTTTGGTGCTGGAGGCCCGTTCCTTCTTCTGA
CCACCGAGAATCCGGGATATCTGCAGCCCTCTACTGAACGCCTGGTTGAACAGCATCCGC
GTCTGGAACTCGGAGACGAAGGGGAACCATGACAGGACGGTAATCGGCGTGAAGAGAAGC
ATCCCCATGATAACCTCGTATGCCCGCGCAAGGGCTCGGACAGATCCCCATAGCCCCGTG
ACCCGAAAAAGAGGTCTGCAAGGTTGCGCAATCTGAAAGTGGTAACGGAGCAACAGTAAG
AAACCAACGGAAGCATAGATGAAACAGAAGCAAGCATGCCACCGTCACTCATAGTAGCAT
ATATGATGAAGCAGATACAAACAAGAGAGAGACTGACCAGCAGTATTCCCCATCCGGTGG
GCAAGAATGCCAGGAAGCAGACAAGTATGTCTTTTATAGTCATGTGAAGCAGTACTATCA
GCACAACCAAAATGGCGAAGAAGGAAACGAATATCATGAACTTGATCAGACGGAAGAACA
GCTGAAAGTTCGCGCCGAACCTCCGCCTTCCGACAGATATAATCTGAAAAGACAGTAGGC
AGTTTAGGAGGAAACGAATTTAGCCAAAGTAACTTTCAGGAATACGGAGTTGATGGGAAA
TCGTGTTGTTCTGCTATAAAGATTTGTATGACTGATTCATGTTCTATTGACAAAGCAAGC
ATGCTCTCTCACCTTCAAAATAACCAGCATCACTAAAATCACGAGCCATGAAATTAAGTA
AACCTGGAAGTAACAAGAGTGAAAATGTTAAAAGACCCACCCAGCCACCTAGCACGGTCA
AAATCAAAATACTGCTCTGAACAGGAAGAAAAGCATACCAGAATACTTTTGTTCTCCTTT
GTGATACTTAAGTGGTACACAAGGCCATACTGATATATGAAAAACCGCAGGGACAGAATT
ATCTCAAAGAAGACTCCGAGTGTTCCTGTATGCTTCAGATGCTCCTGCTCTTTCTCCCAC
CAGGATTCCCAGCTCTTTTCTGGTGACACACCAATCCCACCACGATTGCTGATCCACTTA
TTCCAATCCGACCAATCGTCCAAAATTTTCGCCCACTCAAACCCCGAGGGGTTGAATAAA
AAGGGTGCAAAGAGCCATGTCAACACTAGGAACCACATAGAGGACGTAACAAAGATATAT
GCGATGGTCGAGTGGGAAGTTTGACCAAATAGTTGATAAACGATGAGCAGGATCATCAAC
TCAATGCCTTTAACAAAGTGACTGCGAGAATATAGCCTGTAGTTTTCCGCAAACTTTGCA
TGAAAGACAACAAAGCCCCTGCCGGTACTTCTGTATTGAGCACCTCCATGAAGCAACATA
CGTCCATAATAGTGAGTCTTGGTACCAAGTGAAAATGTAAAAAACACGGATGCCAATTGC
AAGTTCATCATTATAAATTCACTTAGTGCCTTGCCAAATCCTTTTTCAAGGCCAATTTCC
ATCATCATGGGCAGGGCCATCAGAAAACCAAGCTGAACAAGAGACTGCGAGGCAAGAGCA
ACCTGAAGAGCATGATTATGGCTGAATTTCCGTTGTTTTGAAAGCCCTTCTTCAAGTCCA
CTGAGAGCAAGATAAAGGCGCCCATACAGAAACACATAAACTGTGAGGACTGTCAACTGA
GAGGAGTAAAAGTTGTTAGAAAAAACTAGAGCTCATTGTACTGATATACTCCAAATGCAA
AATACAAGTTGTTTTAGCTTTGATAAGTGAACATATTGATGGTAAGATCAGTATAATATA
AATGAGACAAATATGCCCCTGAGGCTGTAGAAGAATCTCTATATAGAGAGAACTGCGTAG
GGCTAACAAGATTCATATTTGCATTTGGCAGAGGAACTTGTATGGATATATTCAGAACAA
AGTGATCATACCAGTGTACTGAAATAAAACCCCACGGTGGTGAAGTAGCATGAAAGCATC
CTGAAGAAATCGAACCGGTGCCCAAGCCGGTAGATATCGCGGCTAAGGGTCTGCTCACCA
TTTCCATTTGCCACCTTAGCCTCAAACTTGGAGATCTGATTTAGTCCTACATCTCTTCCC
TTTCCAACTTGCACATATTCATGATGTGTTACATTGCCTCCACGAAGAGTTGAGTTAAAC
CCTGAAGTATTGAAGACAATATGAATTAAAATATACTGCTGATATCTATCGTAAATTCCG
TTATCTCTTGCAAGACAATATCTTTAATGACTACCATGTTGGCTTTTATAAACATTGCCC
CCTAAATACTATGGGGGCCTTGATCCTAAGAACATCAATGAACACTCGATAAAATCATGG
AACAAACCTGCAAAAATATCTTCACTTAAGTTGATACTCCTTGATGCCTTACTGACACCA
CCCCTTGTTAGATGGAAAAGCCTATCAAATACATCGGGGTGGCCATAGTGGAATCGAACC
CTAGACAAATTCAGTAATAAACTTAGATACAATTCAAAAAGGAGAATCCATTACACAGAT
GCAGGATTTGCTAGCTGAATCACAGAAAATAATGAATGAATTGGGAGAAGAGCACAATAT
GAAAATAGACACAAATGATGGACAGTATGAAGTGATTGGCGGCGCAGAGGAATAACCATG
TCATAAGAAGTCAGTGCGCAAGTGGACAAAACGCTGAAAGATACATGTACTACTTTCTTG
GTTGTTTTTTTCGAGAAAACGCAAAGGAGCCCTTAACTGTTTCAAACCGGTAGTTATAAA
AATTCGATCTAAGACTTGCTTTCTTACAGAATTTTTGGATAACGGCATGTATAACGATTC
TTGTGGAACAAGAACGCTTTTTGCAACCGTCTTATTCTTCGCACCAACTATTGCGAAAAA
TAAGGGACTGAATAGAATGTAGTGCATTAATACTTTTCCAAATACTTCGATACTCAAATA
AACACAGTGTGTTTTTTCTTTCTCTTTTTACAGTAATTGACGCACTGCCAGAATAAAATG
TACAGAGTATTTTCTAATCATTGAAATGTATGAGTAAATGTGTAGTGAAATAGTTAATAG
GAGAAGATCTCACTTCAGAGGGTTTGCAAGCAGCCGTTGTCCAATAGTCACAAAACTGTG
CTCCTGATTTGACATAAACCATGCAAGGGAGGAGACACTGCATCATGGGAGACAAGAGAG
GTTTAAGATGCATATAAATAACAGAAAATAAAATATCAATGTCCACTACAGTAATCAACC
TGCCAGTAAAAATGTGCTCCCTAACTCCAAGTATAGATGGCTGCCGGATTCCATCTTCTG
TAAGGAACTCTTGAAGCAAGTTTCTCATTTTAAGTGCTTCTTCCATATAGTTATCCTACG
AAATTAATGGCATGATGACAAGCAAATGAGTTCTTACTAGAAGCATCAGTACAATTTCAT
AAGTAAAAGCACCATAAGCATGATGGGATACCTGGTTCATGTCTATGGTTTGCAGGCCTT
CACCACGGGTGAAAATTATTGCATGGTTTTGATTTTCGGGTTTTCCTTCTCCCAATATTG
CAGGGCCTGGAAGTTTTATCCGGTAGACAACCTTGGAAACATAAAGATGTGTTCAGATGG
TGGAAATTTCACATGAGTCATTTATACAAACAAAAAAGAGTACTCATCCTGAAATCTTGA
CATTTTCATGGAAAAGGAGAAGTTTCGTGAACAAAAATTGCAGCGGAGATTTTAGGCTTG
TACAAAACACAACTACATAAGTGGCAAGTTTAGTGACTCTGCTTTATTACGCCATCTGAT
TTTTTTTCTAACCATAGACTAAATTTCAGAAACAAGCTTGAAGACTTCGTAGACTAAATT
TCCGTTTAATGACGTCCATGAATCAATCAAGTAGGACGATTACTGCCACCATTTTCAGCA
CCTAGAAGATAGTTGAGAATGCCCCTTCTATTGTTTTTTTAGTTTATTTTTTTCTTCAAT
GTTGAATTTCATTGCCCGATGGATGTGTGGTGGAGATGCGCATGTTGAGATGGATGTGCG
GCCACACAAGGAAGGACCGAATCCGGAATAATGATATACAAGATAGAGTTGGGGTAGCGC
CAATAGAAGAGAAGCTTGTCCAACATCGTCTNNNATGGTTTGGGCATATTCAGCGCAAGC
CTCTAGAAGCCCCAGTGCATAGCGGACGGCTAAAGCATGCTGGTAATGTCAAGAGAGGTC
GGGGTAGAGCGAACTTGACATGGGAAGAGTCCGTAAAGAGAG