Contig Data
morexGenes
Links



Map Locations of contig_1591861 (4795 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1591861

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20802 9 2036 bp AK361073 Available Available None





CDS Structure of MLOC_20802






Contig Sequence (4795 bp)

>contig_1591861 4795 assembly3_WGSMorex_rbca.fasta
TCTGAGGAAGATATGACCCAAGAAATTTATAAGAATTATTTGGGAATTTTNNNNNNNNNN
NNNATGTGGGTTGCTTCACAACCCAGAGCAACATGGTTATTCCTTTAATAGAAAAAGGAA
TATTCTCAGGGAAAAGATTATTGAGATTGGTCCAAGATGGAAATGACAAGGTCTTGATGG
TTTAAAGGTTGGCAAGCCACTAGGGAAGAGAAATCAAGGGCGATCCCTTTAGGTTCCAAA
ACTACCAAGCCACAGAAAAGCAAATCCAGACCAAAATCAAAAGAAAAAAGAAATGAGCAA
AATCCAGGGTGTTACAGTGGTGCGGTGGAGAAGTCGCAGCCACACCAAATCACCCACCGC
AAACTCCGACTTGCGGTGGTGGGCGTCGTAGTATTTCTTGGACAGTTGCTGGCTTGGAGA
AGACGCCGACGTACCTCGGCAAGGATCTCATCCTTGCTGCGCAGAAGGTCGCTCGCCGCC
TCAGTCCGGACCGTCCCCGGTTGAAACGGAAGAATGGGTGGTGGCGAACGACCGTAGACC
ACCTTGAATGGTGTGGCACGCAGGACGGAGTGGTAGGAGGTGTTGTAGCAATGCTCCGCC
CAAGCAAGCCAGTCCACCCAGGCGCGTGGGCGATTTCTTGTAACACATCGTAAGTACATA
ACAATCACCTTGTTGACCGCCTCGGATTGGCCGTCGGTCTATGGGTGGAACGCCGTGCTC
AGACACAACTTTACGTCCGCCATCCGGAAAAGATCGCGCCAGACATGGTCGGTGAACACC
GGGTTGCGATCATTGACGATCGAGGAGGGAAACCCGTGGAGGCGGACGATGCCGTCTAAG
AAGGCACGCGTGACAGAGGTGGCGGTGTAGGGGTGGCCGAGCGCGATGAAGTGCACGTAG
TTGGAGAAGCGGTCAACCACTGTGAGGATGGTGGACTTGCCGCCCACCTTAGGAAGTCCC
TCGATAAAATCCATGGAGATGTCAGCCCAGATCTGAGAGGGCACCTCAAGGGGCTGGAGT
AGTCCCGCCGGCTGCAGTGTCTACGTCTTGTTGCGCTGGCAAGTCACGCATGCCCGCACC
CAGTCTTGCACCAGCGCACGGTCGCCGGGTATGTAGAAGTCAGCTCGGTGGCGGTGAAGG
GTCTTCTGCACACCCTCGTGGCTGGCCGAGTGTGCCAGCAGAATGGTTTGGTGGCGGAGA
TCGCCCGTGTAGGAGTAAGCCGTCGTCCAGGTGCCATGGCTCCTGCAACTCGCCCGCCTC
GAGGCGCTGACGGAGTTGCTGCGCATCCGCGGCTGTCGCCGTGGCTCGGCGGATGTCGTC
GATGAAGGCAAACGAGGGCCCCGAGGTGATGCAAAGAGCAACCCCCTCGGTGTCGACGAC
ATCCGTGTCGTGGTCGGCGTCTTGGCGGGACAGCGTGTCCGCCACGGTGTTGAGGCGACC
TGGCTGGTACTCGATTGTGAAGTCGAACCCGAAGAGCTTGCTGATCCACTGGTGCTGCGG
AACGGTGGATAGGCGCTGGTCCAACAGAAACTTGAGGCTGTAGTGATCCGTGCGAATAAG
GAACGGCCGCCCCCGTAGATACGTGCGCTAGTGGCCCACCACCTGCACCAAGCCGATGAG
CTCCCTCTCGTAAGCCGCGAGCTTGTGATGGCGCGCGGCGAAAGGCCTACCGAAGAACGC
GAGATGTCCCGCGCCCCGATGAAGGACGGCGCCAAACCCCACGCCTGAGGCGTCGCAGTC
CACCGTGAACAGGTTGTCGAAGTCAGGCATCTGGAGGACCAGCCCCGTAGTGAGCGCCTT
CTTGAGTGTCTGGAAGGCCTTGGCCGCGTCGGTGTCACAGGCGAAGGCGTCGCGGCGCAG
CAGTCGCGTGAGCGGTGCCGTGATGAGGCCGAACTCCCGGGTGAACTTTCCGTAGTAACC
TGGCTCTGATACCAGATTGATATGGGCAGGGCCCCTACCAGGACGTGGTCTTAGGTTGTA
GGGATGGAAGGAGGGCTGGCGAGGCTGGAGGCACGGGTGACGGCGCTGGGGCGCCTTGAT
TGCGTTCGGGAGAAGGGCCCCAGGGGTGGCTAGGGTTTTGGGGGCCTCGGCAGAAGCCGT
GCAATTATGATTGCTACTTCTTATCTCCAAAACGAGTCTTTACATGTGCTTATATAATCC
CTGATGTGCTAATAAAAATAATGATAAGTTGGGCCAAGCCTCTAACTGCCTGCGCCATTG
GGCCTCCTCCGGCTATAGTGTACGCGGGTCATAACACCTTTATCGTTGCATGCCATGTAC
AGCTTCACCTGTGTGAGGATTTAGTCATTCTAGGTAAGCTACTTGAATAATGCTGCAATG
CTACAAGCCTACGTTCTCCTTGATGCCTTAGCAAGCCATGTTATTCTTCATTTTACAACT
TTTAATGGTAACATTGATCATTGATGTATCAACACCTCATTTTGGTGCCTTTATAATAAT
TTGCTCAATTTTCGCAGGTATGATTATTCTGGTTATGGACGGTCATCAGGCAAGGTTAAT
AATACTTTCTGCTCTTTCTTGAAACTAATGTTCTAACTTGTCGCTAGAGGAGCAATACCT
GCTTATATTAGAATAGTTTAAAAATGTTTTTGGCAGGTACAAATCATTTAATAGCTTAAT
ATTTTTGTCATGGAGAGGCCACAAATCTGATTCCCATATGAGCGCTTTGGTTAAGGGATC
CTTTTTTGCATTCGGCTAATTCCATATGTTTTTATGGAAGGTAGTTCCATTTGTTTATCT
CATGGTTAGAAAAATAAACTCCGTTGAGACAATCTTTCTGGCACCTTCCATTTTCAGGCA
AGTGAAGCTAATACATTTGCTGACATAGAGTCTGCATATAAATGCCTTGTGGAGGTTTAT
GGGACTAGGGAAGAAGACATTGTTCTTTATGGTCAATCTGTTGGTAGTGGCCCCACTGTT
GATTTAGCTGCTCACTTGCATCACATAAGAGCAGTTGTTCTGCATAGTCCCATACTTTCT
GGCCTGCGTGTCATGTATTCTGTGAAGAAAACATATTGGTTTGACATATATAAGGTTTGC
TTTGCTAGCTGAACTATCAAGAGAAATACTAAAAGACCTGACCTGCTTTGTGTACACTAA
CAGACATTTGCTTTGTTACAGAACATCGAGAAAATTCCCCTTGTTAAATGCCCTGTTCTG
GTGATTCATGTAAGTTTGGAATTAAATACATCCACACGTTGTAGTCATATCTTATATGCC
CCTTGTGTAATCCGTGCATAGCTTCGGATAAATAATCTGGTGACCTATTTCCCTTTCTTC
TCAGGGTACAAGTGACGATGTTGTCAATTTTTCCCATGGAAAGCAGATATGGGAGCTGAG
CCAACAGAAGTATGAGCCTCTGTGGATCGAGGGAGGTGACCACTGTAACTTGGAGACCTT
CCCAGTGTACATAAGGCATCTGAAGAAGTTTCTGTCAGCTGTAGAGAAGTTGCCTGCTGG
AAAAGAAGCAACACCTGAGAGTGAGAAGTTGCTAGCTGGAAATGAAAAACCATCAGATAG
CGTTGCTCTTTCTGAGGTGCATTTGATGACCTCACAGAGGTTAGAGCCATCGAGGCAGAG
CTCAAGACACGAGCAGCATCCTAGGCTGAGCACTAAACGTGTATATAAACACCGGCGAAG
TACAGGCGTCAGGGAAAAGGCAAGGTCGAGCACAGATAAGAAGGAGAGATCAAGGAGAAG
TGTCGACACATTTGACAGGACAAGAGATGAAAATGAACAGACAGACAAACCAAGGAAAAG
CATTGACAGGTTGGTCCTCCCTCAGCCTCCTCTCTTGCACCATCATGCAGAGTTATACTT
TTTCCATTCACTCGATCAGCATAAACTATGTAACGATCATTTTCTGAAGCCAAACCAGTT
TTGTATGATTCATTTTTTTTTTTTTTGCATTGATGCCTTTGGGAATCTTTGGCAGGCTTG
GCGAGATGATTAGATCAATAGGCCTGTGCAATGTTGATTGCTTCAAAGAGCCTCCTCGAA
GAACTGAGGCTTGATGAGGTCAGTGAGTGCTTTTTCATATGTAGTTATAGAAACTTTTTG
TTTCTCTTTGCAGCGGCAGATTCAACAGGGGTTTGTGTGCTCTTGATGATGAAAATTGTA
AAAATGTCCATGAACAGCAAAGATAAATATAGTGCAGCTCCTTGATTTGAGCTTTATTCT
GTCTTGTAAATACTACATCTGTCTTTTTTGAAACGAAGTATACCACTTTTCCTGCTAATT
TGCAGTCGTCCTGCAAATACAGGTTGAGCGTAGGTGCCACTACGTCGCAGAAATGCATAC
AGTGTTTCTGCACCAAGCTCTATCCAGTTGTCCTTGTGTTAGAGCATCTGCAGTGACATC
TTGCAAATCGGACTCCTCAAAAGCCCGTGTCCGGGGACTCTGACCGGCCACTTTCGTATT
CAACTGTGTGCATTGGTCCCAACAAAATATTACGGACCACCATGGCACCGCTTGCCGAGC
AGACTTGAGTTGACGGTGCATTGGTCCCAACAAAATATTACGTACCACCATGGTCCTGTT
TGCCGTGTGTTGACGGGACGCATGCGCACAGTCCGAGCGGGCCGATATACTGAGGGCCTG
TTTGATTCACATCCATACTTTGCTAAGCCAAATTTTGGCAGCCATAGTTTAGTTGGCATA
TGTTTGGTTTTTGCCATACTTTGGCTTGCCACACTTTATTGTCCCTATGACCCATTTATC
ATAGTCAATTTTTTTGTCAACTTTTGTCGAAGTTTGGCATTCGTTTTTTCAGCCA