Contig Data
morexGenes
Links



Map Locations of contig_159168 (5026 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_159168

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20759 2 1405 bp MLOC_20759.1 Available Available LOC_Os01g16900.2, FRAME:+1, EVALUE:0.0, 13101.m01894 protein dehydrogenase, putative, expressed





CDS Structure of MLOC_20759






Contig Sequence (5026 bp)

>contig_159168 5026 assembly3_WGSMorex_rbca.fasta
AAGTCTTTTTAGAGATTCCACTAGATAACTACATACGGATGTATATAGACNNNNNNNNNN
GTATAGATTCACTCATTTTGCTCTGTTTGTAGTCCTTTAGTGAAATCGCTTAAAAGANNN
NNNTTTAGGAACGGAGGGAGTAGTATACTGCAATCAACCCATACATGCTTTCCAAAATAT
TTCTAGCGTAGGACCCACGATTACAACATTCTTCCCATTGGATAAATTAATTATTGTTTG
TCAGAAAATTGAAGAGATGGAAAAATAATTAGTTTTTTTAGAAACTTTGTTTTAGTTTAT
AATTGGTCCTTCTCTGTGCTTATGGGCTTAATTACCCTAATTAAAATCTACGCTTTTTAA
AAGAAAATCTAGCTGTATCTTACGTTCTCTTTTCTTGATCTAAAAGCCGAATCTGACCTA
GGCCATCGTGGGCCTACATGAACACGATCGAACGTGCTCTACAAAAACATGCGTCGAGGT
CGCTCAAAAAAAAAAACATGCGTCGGGAGGATTAATCTTTTTTAGCCACCCATAACCCTA
GCCGTCTCATCCCCTCCCTCTCATCGCCGAAGAGGACCCCATCCGCGCGCCTCCTCCGCC
GTCGACACACCGCCGCGAATCTCCTTCTTCCGGTACGTGCATTCCTCACCGTCGCTCTTT
CCCTCGATCCGGCCTCCCTCCTCTCAGTTTCGCGGTTTCCTTGCACAAAAGAAAAGGAAA
TCGTTGTTCCGATCGGGGACGGCCGGACAGGCGTGGCGTTCGATCCGTGCGCTATTGCTC
GATCGATCCATCGATTAGCGAACAGGGAATTCATCCTTGCCTGCCTAGAAATCTGGAGGT
CTGATTCCCGTTTGTTTCTGCCTGTTTGCTTGTTTCAGAAAATCGTTCCGTGGAGAGGAG
GCATGGCACTCCGAAGGCTGCTTCAGGGGGCCGTTCTACCGAGGACGATGGGACGGTCCT
TGTCCACTGCGCCCGGGGAGGCTATCCGCGCAACCCTCTTCCCCGGCGACGGCATCGGGC
CGGAGATCGCCGAGTCGGTGAAGCAGGTGATCAACGTTGCAGGCGTGCCAATAGAATGGG
AAGAGCATTATGTCGGCGCGGAGGTTGATCCCAGAACACAGAGCTTCTTGACATGGGAAA
GCCTGGAGTCGGTGCGCAGAAACAAGGTTGGCCTGAAAGGCCCTATGGCCACACCCATTG
GAAAAGGCCACCGTTCTCTGAATCTCACACTGAGGAAAGAGCTCGGGCTCTACGCCAATG
TCAGACCTTGCAACAGCCTCCCGGGCTACAAGACCAGATACGACGACGTGAACCTCGTGA
CCATCCGCGAGAACACGGAAGGGGAGTACAGCGGCCTCGAGCACCAGGTCGTCAGGGGCG
TCGTGGAAAGCCTCAAGATCATCACCCGCCAGGCTAGCCTGAGGGTGGCGGAGTACGCTT
TCCATTACGCCAAGGCCAATGGCAGGGAGAGGGTCTCGGCGATACACAAGGCCAACATCA
TGAGGAAGACAGACGGGCTTTTCCTCCAGTGCTGCCGCGAGGTGGCCGCCAAGTACCCTG
AGATCAAGTACGAGGAGGTGGTCATCGACAACTGCTGCATGGAGCTCGTCAAGGACCCTG
GCACGTATGATGTGCTGGTGATGCCCAACCTGTACGGCGACATTATCAGTGATCTGTCCG
CCGGTTTGATCGGGGGCCTGGGCTTGACTCCCAGCTGCAACATTGGTGAGGGCGGCATCT
GTCTGGCGGAGGCTGTTCATGGCTCTGCACCTGATATCTCTGGCAAGAACCTTGCAAACC
CAACTGCTCTTATGCTCAGTGCTGTTATGATGCTGCGCCACCTGCATTTCAACAACCAGG
CAGACCGGATCCACAATGCCATCCTACGCACCATCGCCGACGGCAAGTACAGGACCGCTG
ATCTTGGTGGCAAGTCGTCGACATCGGACTACACAAAAGCAGTCTGCGATCATATCTGAT
TGAGCACACAGGAGTTCCTGCTCGTTTTCTCTTTACTTGTTTATTTATTTGTCTCCCCTG
TTTTTTGTTGCATGCCTCGGTTTCTCTAGATGACCGTTGACACGGTTTAATTCAGACCGT
CAAAGAATAATTGCCACATTCTTGCTATTGGAAAATATTTTATCTGCGTTATTATTGCAC
TCAAGCTTGTTATTTGTTTGTTACAGTTCTTGGTTAACTGGATTGTGATCTAAAAATAAT
AATCCTCTGCTTGCGATCATAACTAAGCACCAGATGTTTTATTTGTCTCCCCCTATTTTT
GTTGCATACATTAAGTTCATTGGGTGGCCGTTGATATGGTTTAATAAGACCGTCGAAGAA
TAATTGCCACATTCTTGCTCTTGAATTTCTTTTACCAGCATTATTATTGCAGTCAAGCTC
AAGAACCTTCCGTAATAGTTTGTTCATTCAAGTTCTTTGAGAACCGGATTTCGACCTAAA
AAACGTCTCAGTGGATTTCGTGGCCTCTACAACATATGCTATTAGCAACTAGTAACATCG
TCTTTGGTTTTGCCATCACGCGTGAGTCCTCTGGTTAATTTATGATGCAGGGGAAGATTG
CATCAACATTAACCTGTCAATGAGATGCATGTTCAACGCATTTGTTGAGGTCATGCATGC
TCAACACCTAATCTATGTTTCCTGTGAATTTTGTGTATCCGACACATAAATCTTGTGAAC
TTGGTTGTGGCTAGAGTATGTTCTCTGAATTTATGAACATGGCTTTGTTGTGAACTTGCG
ATGTATGCTGTATCTTTTGAATGATGTTATATATATTAGTGATGCATTTTATTTGAATTA
TGTGATATATGTTGCTGAATGCTGAGATGCAAATTGGTTTATATAGTTTCTAGAATTTCT
AGTTTGTAAAAAGCCTGTAAATATAAAACGTGACCTCTCAAACTACTTTATCGTGTGCTT
TCTACAAACACTCTGTAAAGAAACATCACATTGTGATGGTAAAGTCGTATGGGTAACATG
GCAAGGTGTTACATTCAATAAGTCGCTGACATGTGGCGTTGGAGAGCAGTGGCCACATAG
CGGGCTTTTTTTACCTAGTGTTTTTCGTTGGTAAACACTCAACAAATCAGAGATGTGTCC
AAGCCAGGCACAAGCCTACCGTGTGACAGTAAATCGCTTACCATGTGTCCGCTAACAGGA
ACAATATTGAAACAAATTTTGCCATTGACACGTCAACTATTAAATAAATTTTACCTTTGC
TTAGTTTCCGCAATAGAATACTCCCTCCGTTCCTAAATATAATTTTTTTAAAGGTTTTAT
TAAAAAACTACACACAAATGTATATAGACATATTTTAAAGCGTAGATTCACTCATTTTGC
TTTGTCTGTAGTCATTTAGTGAAATATCTTTTTAGAGTATAGCCCTCCGTTCCTAAATAT
AAGACATTTTAGAGATTGTACTATAAACTACATTCGGATGTACATAGACATATTTTANNN
NNNNNNNNNNNNCATTTTGCTCCGTATGTAGTTTTCTAGTGAAATCCCTAAAAGATCTTA
TATTTTGGAACGGAGGGAGTATTTAGGAACAGAGAGAGTACTTGATAAATCCATGTTTTC
TAACGAGTAGTGTGCACAGTGTTATTTATTGAGTGTGGCAACAACAACAAAAGCTTTTGA
ATTTCATCTCCATAAAAATGGTTGAGTTTTGTTGTTGGTTCGTCAAGCATATCACAACCC
TCCTCCTTTACTCTGGCTTGGGACCTCTTTATTTATAGAGTGTGACACTGATAAATAGTT
TTTGTTGCATTAGGCTTATAGGCTATCGTCGGTAATAATAATCCTATTATCAAAGGTGAT
TCAAGCAAAAGAAAATTAGATTAATTCTTAGTAGCCAAGCATCGCAAACATTAACGCCAA
TTTGGTACCACATACTTTTTCATTACTTTATCTATTGCTATGAACGCGGTTCTTCGGAAC
ATGGTGCTAATGCAGCTGAATAGAAAAAACAATTACAAATTACAAAGTGGTTAAAAAATC
GAACTTTTTTTAACATACATGGCCTAGCGTAATACTCTTTTAAAAAGTTTCACGAATGAA
TGAGTCGTGATATTCTCGGTGAAAAAAACATGAAGTCAAAAAAATTGTGAATTTGTACCT
TTTGCATAGTATCGAGTGTTTTCCGTCTAGAATACCACAATAGTCATTCCTTTGTGTAAC
TCTTCACACTAGTATTACCCTAAGTAGCATTTGTTAGAAATTATTTTGAGATTTTTTTTA
CTCTTTTTGACCTTTTTTTTTCAATTTTGGTTCTATGGGAACTAGGATACATTGACTATT
TCCATTATTTTACCTTGCACTATATTGTTACATAAGCACCTATTTTCTTGCGTCCTAGTA
AAGTAGATGTTTAATGTGCTTGAAAGGTTGTACTAGTGACACATATATAGTTTAAGGGAA
TAGAAAATCACCTACTAACAGTGTTTGACACTCGTTATTTTACATTGAAAATGCTACAAT
AACCCCTTACATTTGAAGGGGCGGGGGGAGGGGGGTGCCGTAGGCCTTACTGGCTAGCAC
CATGAGTTGGTCGGCTAGCCAGCTAGGATTTGAGATTCACTTCTAAATATTAAATTGATG
CCTAGTTTTTCATAAAAGAATTGAGTTTGCAACAAATGGTATGAACGCTTTGAAGTAGTG
GTGAAGCATACTGAGGTCCAAAGGGGGCAATGCCCCCTACCCCGAGATTGGACCTCAAAT
GACCGAGCTTGGAGACCTTAACAATGTTGGTTCCCTTGTTCAACATGAACATGTGACTAT
TGTCGTTCTTCACGTGCTCTAGGTACATGTGATAGCCTGGCTTATTAGNNNNNNNNNNNN
NNNNNNNNCAATAAAGAATTCCTTCTTTTTCGGGAGCTCATTCAAACAGAACTCCCAAGT
TAAGCGTGCTTGGCTTGAAGTAGTTTTAGGATGGGTGACCGACCGGAAAGTTCATCCCGG
GTGCGCATGAGTGAGGACAGAGTGTGAAGAAAAGACTAGTATTGAT