| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_1590527
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_20558 |
1 |
726 bp |
None |
Available |
Available |
LOC_Os04g01300.3, FRAME:-2, EVALUE:6e-14, 13104.m00040 protein OsRhmbd10 - Putative Rhomboid homologue, expressed |
CDS Structure of MLOC_20558
Contig Sequence (2451 bp)
>contig_1590527 2451 assembly3_WGSMorex_rbca.fasta
TTATATAATCTGGTTTTTATAAGCTATTATGTTTCCAAACAGGGCAGTTTATACTATAGA
TTTTAAAAACTAGATGACCAGATTATTAAAAACTCATAATCTACTCTTTAGCTCACCCCT
GGAAGGACTTGCTCGATGTAACCGGCTGTGAAGACGGTCCATACAAAGGGAATTGTCCTG
CAAGTCAAGATATACAGAAGAAACTCATTAGAGATGGAATTGAGCTGCCAATTTTCGAAC
CCAGCAAAATTCAGAGCCGCAACGATTCTTTCGGAATTTGACGCACTTGGCGGGGATGAT
GGCGAGGTAGTTGAGGGAGGATGGGAGGAGCTGGAGCAGCACGTAGCCACCGATGAGCAC
GACGACGAGGCCCTTGCAGGTCCGCGTGAACTCCTTCCCGGGAACCTGCACGCGCGCCAA
CAAGAGGGAAACGCCACCCGTAAGTAAGCAATCAACGACAATTGACCAACAGACGCAGAT
CTGAGCAGCCAGACACGCAATGAGCTGCTGCCCCGCTCGGCCGGCGAGGCGCCAGATCGA
GGTACCCAGCGGTCAACGCCGCGAGATCCCAGGATTACCCCCCTCAGATCTCGCAAGAAA
CTAGCAGGCAGCTACGCCGGAAATGGCGGAGCAAACCGCCAGATCTCTGGCTGGCACGGC
GAGATCCGGCCGCCACCAACCGCCAGGATCCAGCCGTCCGGACACGGCCGGCCGGCGGGC
GAGCAAGCTCAATTCTTGTACCCCGGACGCCGAGCAGGCAAGAAAGCAAGAAGTGGCGGC
AGAGGGGAAAGAAGAGAGCTTACGACGGCGGGGGGAGCTCCGGCTCCGGCCTGGTCGGCT
GCCGCGGCTCCGTCGCCGTGGGACTCGGCCGTCGCGGCCTGCAGCGGCTGGCTCTCCATC
ATCCCTGGCTCGTCGTCAGTCAGATCTCCCTCCCCTCCTTGCCGACTAGTCCCTCCTTGG
TTTAGTAGAGGCGCACGGGGGAGGGAGGGGGGAGGTTGTTGGGGGTCAAAGCCTCAGCTC
GGGTAAGCGGAGGGGAGGAAGAAGTGGCTGGCTCACTGCCTCACTGCCTACCTCGCCGGT
TGCCCGTCGCCTTCCGACCACCCAACGCCAGTAATTACTATACTGAGCAGTGGCTGTGAG
CACACGCTTCTTACTTAATTCTGGCGTTCAATCGGGCTAACCTCCCCTGCCTTTCCCTGC
CACCCAAAGTCAACCGGTGAACCACATTGCCTATGTCACATTGTACTCTGTTTGGGTGTT
GGAATTCGAATTGGTGTCGATGAGAGTTTGGTTTGGTTTGGAGGAGAAACACGGTTTATA
TATAAATACCAAGAAAAGGAAATACGTTACGGATTGACTGTAATTAGAATGTCTCCAAAT
GTTGCGTTTCGACGGTACCAGCAATCGGAGAGTATGACGGCGCTAGATTCGATTTCGAGA
GTCATTTCATTGTCATGCTTTAGAGTTCGTATATCTGAATGATGATATTTCTCGATGAAC
ATCTCCTCGTGTGACGGTGATGGTGGTGTGGAGGATAAAGCCCCTCCATCGTATTTGGAC
CCATGTGCAAAAGCTAAGAAGATGATGCCACGACCGACAATGATGAGCATATTAGAGGAA
CTATCATGCTAGTAATAGGCGGCGAGCCAAGGTGAAAACCGGAATGCGATGCGTCTGGGG
AGGGGCCGCGATGTGTAGGTAGTCGTCAATGAAAACACTTATAGAGTGATTGTTCTTGAT
GGTGGTGGTTGTTGGCTTGGTCATTGACAACATGAGAAACTCATGGTATAATTCAGCAAA
AGACATCAACTGTATCTTTCGCCCTCATAATTCATTGGTTGCGTCATTGATTATTGTGAC
ACTTAGTCGGGAATGCTAGAGATGGGGGAGTTGCAGGCAAGGGGCCGCCTACTCCTAGGT
ATCCTTATCGTAGATTGACAAGGTGTGCGAGTGGATACGATGATGACATAAAAGCCAAGT
TAGGATAGTCGATTCATCCCAATCAAGGGGGCAAACTCCACATTTTACCTAGAGCCAAAT
ACCCTAGGTGAAATACCAAAAATCATAGGAAAAGACTTTACAGCTTGCCCTAGGTAAAGA
ATCCTAGGTATAGTATAGTTGGAAAAAGGTCTTTCCCTAGGATGCATTTCGCCGGCTCTA
GGGAAAGTTCTTTACCTAGGGGCACAAGCCCTAGGGAAAGAAATTCGATGGATATTGCAT
CCTACATGGAAAGGTTGTTCGCCCACAGCCATATTAGGCCATAGGGAAAGATTATGGGGC
CCTTTGTACTGCCATTTAAATGTGAAATTTAAATTTGTATTCATGCTGCCATAATTCAAA
ATCAAGCCATAGTTATCGATCGAAAGAAGCATCACATAATTGAAAGTGCGTTATATCGAN
TAGAGGGGGTGAATAGGAGATTTTCACAATTTCATCACTGAGGAAATTCCT
