Contig Data
morexGenes
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Map Locations of contig_159047 (5248 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_159047

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20551 2 707 bp MLOC_20551.1 Available Available LOC_Os07g16950.5, FRAME:-2, EVALUE:2e-89, 13107.m01773 protein Mak16 protein domain containing protein, expressed





CDS Structure of MLOC_20551






Contig Sequence (5248 bp)

>contig_159047 5248 assembly3_WGSMorex_rbca.fasta
AACATGTGGTACTGCCCGCTGTTCAACTGTTTGGGGTTATTTTGGGACCCGCCCCGCGCC
TCCTACCCTTCGGGGGCTCCGTGCCGGGGGGGGGGGGGGGGGGGGGGAGGGGAGGGGAGG
CGACGGATCTAGGGTTGCCTCCCGGGGGCGCCCACAAGAGCGATACGGTAGAGAAACACA
CTCAAACGACCAACAGTGCAACTTTGCAAGAACGTGATGGATTTTACTCTTATGAATTCA
TTACACAACTTGATGTTAACAACGTACATCCGCTGCAGCTTTGCAAGAACCTGGTTTTGG
ATATAGAGACTGAATATTTTTCCAAGTTAGTACAACTCATGCCAGTTTCCATGCTCGCAG
AGAAATAAACCATTGCACAAACTCAATAGCTTATCTTGAGAATATAAAAGTAAATTTGTC
TAAACTACACGATCATCAACAGCATGCATGTTACTGAAGGCGCCGTGCATGGTGAATCAC
ATCCGCATCCTTAGCCTGCTATTCCTGTCTTCATCTTGTTCCACCTGTCATGAAAAGGCG
AGAAAAAAAGTTATACTACAGCAGAAATTGTGCTGCTAATTCAGAGTTAACCTACGGAAC
AATGGAATCATTATGAAAAGAAGAAACGATGATATTATGTATGCCCCAGATGCACGCTTT
GGGGAAACTTCTCCAATGAGGAAGAAATCGTCCAAAGAACTTTCAACGATGTAGATAAAG
AGAACAGGTGTAATACTAATTCCCCACCATTATTTGTAGGACACCAAATATGTGACAAAA
CAATAAGATGTGTTTTATTTTATCTATGTCTTTAGGCGACACCTTGTACTATGACATTAA
GAATATTCATATATAATTATAAACAAGTGCTTTACCTCGGCGACAATTTTAGTAGATTTC
CACCCAATCTTTGACATCGTATCCGAGCATGATCTCTTGGGCTTCCTTGTAAATGGCTCA
TCAAAACTATCATCTCCATCTCCATCATCTGCAATCAATTCAAATTTTTTTGGGGGTCAG
ATTTGTAGTTGGCACTATTATTAAAAAAAAGGTATCTTCACAAGTCAGAGCATTCTACAA
AATTCCCAATCAAAATAAGTAGATACGAGGGAAATGTTTACCACCTTCTCCACCGAAGCC
TTCGAAGTCTTCCATGTCTTCCATTTCACCCATCTCGATATCAGCACCTTCAACATACTC
TATCTCACCTTCCTGTATTGGCAAGTGAATCCACAATATATGGGAAAGCTTGTGAGCAAT
CACAACATAACAAAGTTAGCTTAATTCTCATAATCGGTCTGCGCTTACTTCTTCCTCTTC
TAACTCAGGAGCCAGACCATCTTTTTCCATGTCAAGGATGGTATCAAACTGGCTGAAGGG
GACATTATGGATTACACCACCATAAACACCTTTCCTCAAACGTTCTATTAGTTCACTTTC
AATACTCTGACCGATAGCAGGAAGATGTTAGAACGTGGCAATGTATAAAACACCAGTGAT
AGTGATTATCCAAAAAATAACCTTTTCTAGTTGAGCAGCCTTTTCAGCTTTCTCCAACCT
TTGGAGATCACGCTGAGTCTTCTTTCTGGGGACTGTCATTATCTTCTCTCTAACAGAGCA
GAAGAATATGTTTAGCAACTTTTTATGTGTCAGAAGTCAACACTATAAGTATGTACATCA
ACAGTATGAACCAGCATGTAACTGAACCTGGTTACATGTTAATGGCACAAATGGCATACT
ATAAGCCTCAAGTAATCACTAGTCAATTTTTTTTTTGTTTTTTCTGTACTGTCAGAAACA
GGACTGGACCTGGTTACATGTTAATGGCACAAATGTCATACCATAAGCCTCAAGTAATCA
CTAGTCAATATCTTTGTTTTTCTCTGTACTGTCACAAACAGGTTTGCAGTAACTATAATA
TCATTAGTATTTTGAAATATATAGAAAACATCTGATTTGAAAGCATTTTGGCTTTCGTAT
TCCTGAGTTACGCATCCAAAGGTGGCCTTAGGCAGGCCCCTGATTGGTCAAGGAAGTAGC
TTGATCGGGAAAAGGATGGAGTGGAGCTGTGGAGTTGCTGCCCCACCAGTGAGACTGATG
AGCAGTGCTGGCAAGACAGAGCTCATGCCCACACGCAAATCTCAATCTCCCATTGAGTGC
TTGACAGGGGATTAACAAACCCTGACTGTATCGAGTGACTGCGTCAGTTTAGGCTATCAC
CTCTTCCAGGTGCAGACGAAAAAACAGTTGATAATATGCTCTGTCAAATCCGTCGAGGAA
GGAAAATAAATCACACGATTGACTACATGTGACATTTGGTGGTGGCTACACTATGTTCTG
GATGAAAGGATTTGACAAGATAACATCGGATTAAGCCAAAGTCACAAGCTGAAGCAGAGT
CATGCATGGGTGTGGGCTAGTCGCCAGAGGTGAAAAATTGTCCGCTAAGTGTGGTTAAAC
CAACAAACAAACCCACATCGACTCGCAATCGACGCTTGCTAAAGTGAGTGCACTCGCACA
GCAGCCTGAGCAATCCCAATAACAGATACGTCCACAAGGTTCAGCATGATCAGCGAGAGT
TCACCTGCTCAGGGTAGTAGAGTCCACGCAAAGTAGACGCAAGCAAGAAATAAAATAAAT
GGCAAATAGATCAACAAAACCTACTGTTTTAATGTTATTGACAAAAAAGATGTAGAAAAT
ATACACAGAGTAAGCCTTACCAAAGAGGATCTACTTGTAAGTTTGTGGGCTGAACATGTA
ATAAATTTAGCATAACTATTCAGCCTTGACATACGATCATTGCTGACAATCCTAATTTAT
GTCCTCTATTATGATCTCTAATGTATTTCCCTTTTTAGACTCCACCAATTTGGCAAACCA
TATAAGAAAAGCAAACGTAGCAATGGCACCTACGTAAAATCAATGTTCAGGAAATCGTTA
ACTGGTAACTGCTCGATCCACTCACGAGTAGGGTATTAATAGGAATATTGGCCCGCTAAA
CGGCTACTTGGTGACCCATCAAGCAGAGATTAATCGGCTAGTTAACTGATTTGTTGACGA
TATTTTGAACAATGCGTTAAACTGAATATGATTCAATTACTACGTCTTCAAACATACATG
ATGTAATATTTAAAGAAATATATCCACATTTACTGCTATGAGGTCAGAACCAGAATTCAG
GAGCAAATGACGGCAACAATACAATATGTTGTGGGGTACTAAAACAAGAAGTAGTGCTTA
CCTCACTTTAAGCTGAAGTTTCCTCATCCTTATCCGATACTGAGTCATTTTTGTAAGGCG
CTGTTTGATCTTGTGCACAAGTAGCTTCGGCCAATGTTCCTACATAATGAAACAAAATAG
GTGCCCATAAGGCTAACTTGACTCACGTTGAGATGAAGTGACAAAGCACAGCAGCTAGCT
AGATATATGCATACGAGATGCTTTTCGATGACTTCCATTGCTTTCTCATAATTCCTGGGC
AGTTTGACTCTCTCCCATAATTTGTTTGGCAGATGAGCTCTTTCCGCAGTTTTCATGTAT
AAGTAGAAAATACCTGCATGACCGGTTAGAATAGAAAGCACAGCATCAACAAGTGTTTTT
GATGATAAGCATACCTCCCGACGAAAAAGAATTAAGAGCACAATGACTAAAGCATGCAGA
CCACAATATTTAAAGCAGTGGCTGGCTGAAGCATCCAAAATTTAAAGCCATTCACTCTAG
CCTCTGCAGACCAACAACAACTACTGGTTGCAAAATAAGATTGCTTTGGCATCACACAGT
TGATCATGCATGTCAGGGACAGCTCCTTCAATCATGTTTGTAATGTACTACAAGACACAA
AAGTTGTATTTTGAAAACTTGTTTTCTGAATCATGCATTAATGACTTCTTTAACGTCTCA
CAGAACTCAAGCTCCGCTGGGTCCTGGGTCCCAGTTCTACAGGATTTGTCGGTATGTATT
CATAATCATATATAACAAGTGATTCGGTCTTACACCTTATTCCATCAGTTAAGTGATTCA
TTGAACAGTTGCCTACTTATCCTTCTAACAGGATATGACTGAAATTAGCATGTCATTGTG
CAAAACCAAGGCAATGTGGAGACCCTCTTACTGGAGACCAAGGTTGTACGGCTGTTCAAC
TAAATCAACATCTATCGGTGGTTAAAACTTGAAAGAAGAGGAGGGCGGGGTGTGGTGCAG
CAAGCAGTAAGCAATCACCGTCGTGGTCCCGGATGGTGGCGTAGCGGCTGTTGGCGAGGG
GGCAGGAGCTCCGGTTGCAAATGCCTGTGGCGTTGTAGGGGTTCCGGCAGAATAGCCCCG
TCTCGATCCTGCGGAAACGACTTTCATCATCAGGCCTTGTTTGGTACTAGTGTATTTTAG
AAAATTGGTGGGGATTATCCCGGTCAAATCCTTAAATCCCCATACATCCAAAAACACCGT
TTGGTTCCGGTGTATTTGACATGTTTCATCCCTGTACTTTCCACAAAATCTTCAAACTCT
GATGCATTTTTCTCAATATATACCCAATACACCACCCCTACCTAATGGATTGGGAATAAA
TGGAGGATTTGAAGGGATTGTGTGTCAAGGTTGGGATTTTACCCGATCCCTGTGAGGATT
ATCCCCACCAATCCCCTCAAAAACCCTAGTACCAACAGAGAAGGCAGGGAAGGGAAGCTG
AGGGGTGTCGCAGACGAACTTGGCCATGAAGCTGCAGTGGTTGTGGCGGAGGCAGTGCCA
TATCACCTCGTCGCTCATCTTGGACAGCGATGATGCAGCAAGACGCAGCAGTCGAGCAGC
CTGGTGGAGGCTAGAGCGAACGTGGCAGGGAGAGGGAGGCGGCCTTGTGGCGGTGGTGGA
GCAGTCCGGGACGGGAGAGGAAGAAATTTTAGACGAGTTTTAGGGCTTTCTCTACTTCTT
ATTTTGGCGATCCAGCCTCAGCCGATCGATGCGGGATGGCCCACGGAGACTCGCAAACTT
ACGAGAAGGGCCCACGCAGGCCCAGTATATATATATTTTTTACAAACACACATTGGCACG
CGACACATTCTTTATCTCTCTAATCTATATCTATATCTATACCTACTAGCAAAAGGACAT
GTACGTTGCAACGGAAGAAAAAAATACCACACGCTTTTAATCTTTTTATAATCATTTTAA
TTCATTAAAATAATAAGCTAAATAACTAATGTAGTCAGTCCTATCCTATTTTGTTGAGAA
ATCAACCCGTCCATTGTTAATTCCACCA