Contig Data
morexGenes
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Map Locations of contig_159027 (4832 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_159027

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20514 1 992 bp AK372371 Available Available None
MLOC_20515 1 1011 bp MLOC_20515.1 Available Available None





CDS Structure of MLOC_20514






CDS Structure of MLOC_20515






Contig Sequence (4832 bp)

>contig_159027 4832 assembly3_WGSMorex_rbca.fasta
AGCCATGGACAGGGGTGCGTGGAAGGGTGCTATCCATGTGCCAGAACCATGAGTTGGTCG
TGAGATCTTATGGGTTTCACCTCTAGCCTACCCCAACTTATTTGGGACTAAAGGCTTGGT
TGTTGTTTATATTCTAACTTGGTGTTTAGTACCTGCAAGTTACTATACATTTGAAGTGTT
TAATACCTGCAAATTACAATATATCAAACAGATCTGCCAATTATTGCAGCTGTATATAAG
GAGATATGTTTTTGGACTATGATCTGAAATCTGGTATAACCAATGTAGGAACAAGTGTGG
CAGGTGGAGGCCAGAATGGTCACTCACTTGTTGGTGGGAGTTTGTCAAGCATGTCAGATC
CACGAGGTTACAGCCTCAATAGCTTATATTCTATGATTCGGTTAAGAGAGGTGAATTTAC
TATCACAAGTGAGCTTTGCAATATGTAATTCTTCAGGACTTAATATTTCATCTTCGATTC
TTATCCTTGTTCTTACTAGCCACCCAGCACCTTGAAACCATCAGAAAACAAGACTGACCG
AGACAGAACAGAGATAGCTATTGTGAAACTTTTGGTCAAATCTTACTATGACATTGTCAG
AAAGAGTATTGAGGATGCGGTTCCCAAAGCTATAATGCATTTTTTGGTAAGTTTAGTGTA
TACAATGTGGTGATACCTGTTAAAGCCTTAAAGGTACCTTGTTGACTATCTACTTATTGT
TGAATTTGCAATATAATTCTACCGACTTATTTGTTCTTTGCTCCAATTGTTACAGAGCTT
TAACATACCTGTTGTTAAAAAAAAATATACCTCCAACGGTCGAATTATATATAAATAAAA
AACACTGGATGCATCAATTAATCGCTGTTGTTATAATATATAACTCCTGGTGTGGATGTA
TGTCCCATGTAATATTGGTATACTCCGAATCAAAAAGACAAACTACTTCTTGAGAGAGGT
TTAAGCACCTCTTTCTGTCCCTACCTAGACATTTTCTTGCATGAACTAAAAAGTTGCTGC
TAAAAGTCATAGGTTCCAGCAACGCTGGTCATTGCGCCAAGCAAAGTATCATTACTTGTT
AATTAGTGTTACAATTAAAATCTAACTTCCAAAGTAGTCTGTATTGGTGATACTGGCGTT
TGACTGATCTTTTACTTAAGGTGAACCACACAAAGCGGGAGCTCCACAACGTTCTAATTC
GGAAACTGTACAGGTAACTTGCAGTTTGGTTTTTGTACTTGCTAGCGAGCAACCCAATCG
TAAATTTCAGATTACTTTCTATCTGGAAGAATCATTCTATAATGACGATCTGGTGTGCAG
GGAGAGCCTGCTTGATGACATGCTGAGGGAAACAGATGAAGTACTTATCAGACGGCAGCG
TATTCAAGAAACGCTCCAAGTTCTTGAACAGGCACACAGGGTATTTACTCCTCTCCTAGA
TGTTCTTGTTAACTTGTGTCGAGCATCCATTTGATGTTTGTATTTTTTCAGACGCTCGAG
GAATTTCCCCTTGAAGCTGAGAAGCTTGAGAGGGGCTACAGCCTCTCTGAGTATGGCACT
GGCCTGCCGAAAATCCCTGGACTCAGCAATCGCAATCCTAGGGGTATTCTCCCTTAACTT
GTACAGTTGAAAGAAGCATCAGATGTACATGAACATTCTCATGTGGCATGTTGGTCGGAC
CCAGGTGCCGAAAAAGGGCACCTCTTCACTTGGTTTTGATCAAATCCTCAATCATTTTCG
AGCTATTTGTTTGAGTTTTGAGCTGGGCATCCAAATTTTGTTCTACAAAGGCATTTCTTT
GTAATCAGAAGCTGTGGCTGGAACAACACCGGGAGTAGATCAGTATGTAAGTTACCCCCC
TTGTTAACCTGACAACGGGACCACCTGCACTTATATTATCATGCAAGGCTACAATTGCGA
TTTTACAGGAGCATCTAAACAAAATTTGTAGTTATAAACACATGTCAAGCAATTTCTTTT
GAAAGCCCCTCCATATAGTTGGTAAGCTTCAAATCTGGTGTTGAGCTACGCATCATGTAC
TGTACTAATCATGATGCTCTTAGCAAGGTATCAGTTCTGTCAACCCGTGCTAGTTTTTTT
TTTCAGTCTTATTAAAAGGCGTAATGTGTGTCGGCAGCATCCACTGCTTGAACTTTATGG
GATCAAAATGCATACAGTAAGAATTGCAATGCTTTAGTGGTTGTCCTGTGAATAGGTCTG
GATCTCGCATGCTCGAAACACACTGGTGCTGCATCAGCATCACTCTGCAACACACCCTAG
ATTATCATTTTCTGCTTTGATTTATATTTATGTTTCAATCGCCTAGCACTTGGTCCTTGG
GTAGGAGAAACTACCATGTGCTTGTTAGGGTGGAACCAATCGAATCGCAGCGCGGATGAT
TATTAGTAATCTGGGGGCGTTTGTCGACGCCTTTATCGTCCTCCTGCAATGTACTCGGGT
AATTACCAAAAAGGCTATCGTCAGTACAAGCATAACACCAAATCCAGGCACACACACCCT
CAAGGGAGCAGGACACCAAGTAGGGGGTTCTCTCGAGGACACAACTCAACAAGCCTTAAA
AAACAAAATAAGGCGGAGTGGGTAATTTGACAAGCAGAAAGATGTGGCGTGACAAACTGA
ATGAAGATACGATAAGCATTGAAGAGACTTGCACAAAAGATTTCCTTGGGCGTGCAAGGC
TGCAACGCTTCTCTTATGTGCATGTGCATGAACCAGCTCGTAGGCATATTCTATGGAGGA
CAAATGCATACGAATTCCTGTGGTAGCTAATAATATGCGTTCAAACTGCCTGTGAGGATA
GACAACACTTCAACTCTTATGATTTTTTTAATTGCATTTGTAACCATTTCATGAGCGTTG
ATTCTGCCTCATAAGTAACCATTTCTTCCTGGATGCACCTATTCCCTGTCATTCGTTCTC
CATGTCTACAAGCTATCATTGTTTTTAAGGCGCCCTGAAAGCGACGCCTAGGTGTCAGAG
CGCCCAAAGACGGTGAGGCGTTGAGCTCGCCTTAGACCATGGACTAAGGCGTCCAGATTC
CCCTCCTGAGGCGTCCAGGCGTCGCCTTGGTCCAATTTGGACTCATTGGGCAGGGTTGGG
TGGGAACTGGTGAGTGGCGGAGCGGAAATCAGAAATTGGACGGGATTGGATAGAAATTTG
GGGCCAATCTGAGGTGAAATAGATGGGAGAGAAAGTGCGGAACACAGCGGTGCAGAAAAT
CAATCTGTGAGAGAGAGAAGAGTTCTCTCCTCTCAAGCGACCATCCCCTCCTTCGCCAGA
TCATGTTCGCCGGCCAAGATTCCTCCCTCATCCAGCTTCCTCCCCGTCGTCGGCCAAACT
TCCTCTCCTCCCCTGGCGCATCCCTCCCCCAGCAGGGCAACAAGGTACGACTGCCCTCTC
TCCCCCTGTTCCCCATGGTCTGTCGTGTTGTGCTGTTGCGTTGTGCTGTGCTGCTGCTGT
GTTGAGCTGCTTGCCTGCTTGCTTGTCCTTGATATAGTGCTAGCTGCTGCAATTTGGAGC
CACCCGTGGTTAAAATATTGATGCTTGTCCTTGTTAGTTGTAGATCATCAGTATATTGTT
AGTGGATCATCAGTATATTACTATATTGTTAGTGGATCTTCTTTATACTAGCTGTCTAGC
TTATTCAAATAGTAGTCGTAGCTTAGTGGATGTTTCTTTAATATGTTGTTGGCTGTTGCA
CTTTGCAGTCATGCCAGATGGGGATGGTGATGCTCATGAGGGCGTTTATGATCCAATGAC
AGATCCAACACGCAGGCCACGGAGGTCAAATGATCCTGGATGGAAGTATGGGTATTGGTT
GAAACCTCTGGACATCAATATGGTTGTATACAATATTTGTGGCAAGATAACTAAAGGAGG
GATCAAGAGACACAAAAAACATCTTGCAGCCACCGGTGGGGATGCAATAGGCTGTCCAAA
TGCTACCACACAACTTAGGAGGGAAATGTCAGAATATTTGGAAAACAATAGGAGAAAAAT
AAGACAGCCAAATGATGATGATGATGATGTAGCGGAGGTAGATTTAACAACCATGTCACC
AACAGTTCAATGCTCCACTACAAGGCCAAGTTCAGGGACATCAGCCAAGATGAACAAGAA
GGCCTTTCCTGTAAAAATCACCGACAAAAAGTGTCAAGCTGTTGCAGGGACAACGGCCAA
GTCAATTGTTTCCATGCTTAGGAGAAAACCTGAGGATATTGTCGATGAAAGACGCTCCGG
GTGTTCTCAAAGCATCATGGAGTCCAGCACAAAAACACCAGAAGAAAGACACTATGTGAG
TATGCAGCGGGCATTGTTTTTCTAGTGTGGCATACCTTTCAATGTTGCAAGCTCTAGGCA
GTTTCAGATTGCAATGGAAGCCTCTTATCAATATGGCTCAGGTTACAAGCCTCCTTCTCC
TCATGAGCCGCAGGAGCCATTGCTTAAGGATTGTGTCAAGGAAAACAAATTATTGAGGGC
GCAACACGAGGTAGCATGGAAGCAATATGGCTGCACACTTATGTCAGATGGCTGGTCCGA
TAGAAGGGGACGCCACTTGATCAACTTCCTTGTAAACAACCCGGAGGGCACTTACTTCTT
GGAGTCGGTGGATGCATCAAATGAATGCCAAGATGCTCGGATGATATCAGATTTTCTAGA
GAAAAGAATTGAGGATGTCGGTAAAGAGAATGTTGTCCAAGTTGTCACCGACAATGGTGC
TAACTACAAGGCAGCGGGCAAGCTTCTAATGGAGAGGATTCCTACACTATATTGGAGTCC
ATGTGCATGCCATTGCTTGGACCTAATGTTGG