Contig Data
morexGenes
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Map Locations of contig_1590103 (2432 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1590103

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20487 4 1495 bp MLOC_20487.1 Available Available LOC_Os06g21590.1, FRAME:+2, EVALUE:3e-147, 13106.m02312 protein chlorophyll A-B binding protein, putative, expressed





CDS Structure of MLOC_20487






Contig Sequence (2432 bp)

>contig_1590103 2432 assembly3_WGSMorex_rbca.fasta
CATTCGTTTCGTTGTTAATATGGTGTGATTTGCTACTCTGTTATAATACCCATCGAAGTA
CTGTGCGTGTCAGCATACCGATCCAATGATGACACAGATGCATAGAGACTGGACTGATCG
AGGTCTAGTCGTTACATAGAGATAGTACAAAGTTGAGACACTTATTTTGAAACGGCGAAA
GTACATGACTTTATATATCGATACACACCGACTTAGATTAGGTATTACAAACCGACTTAG
ACTAGGAAACTTATGATGCAAGAAAGAGTGCACCACGGGCTAAAACACCCGTGCATGGAG
ATTTTAGCAGATAAAATTGAGAAAGAAAACATTTGCGTCTAATAATCCCATCTGGATTTG
GTGGATAGAAGTTACCTACATTGAGCCAGCAGCAGATTTTCCATACCTTGAAGACATGAA
TATGTGGACCACAGGAGCCTGGGAGAGATGCCACGCAGGATAGCGATTAGAGAACGCGGG
GGGCGCCACGTAGCACAGTCGCAGATGCCACGATCCGACGTGGCCCAATGGCTCGTTCTC
GTGCGGATATTGCAGCCAATGGCCGGCGGCATTTGGATATCCCCATCTCGCTCCGTCTCC
GGCCTCTCGTGCTCTTATTAGCAGCCTCAGATTCCCTTGTCCTCTCAGAGCGCACGCCTG
TTCTTCTTCCTGTTGTTGTCTCACCGCGCAGCAAGGAGCAGCCAGCATCGAGAGAGCAGC
AATGGCTATGGCGTCGTCAAGCGGGCTCAGGAGCTGCAGCGCCGTGGGCGTGCCGAGCCT
GCTGGCGCCTTCGTCCCGGTCCGGCCGCTCCGGACTGCCGTTCTGCGCCTACGCCACCAC
CTCCGGCCGCGTCACCATGTCCGCCGAGTGGTTCCCCGGCCAGCCCCGCCCCGCCCATCT
GGACGGCTCCTCGCCAGGGTGACTAAAGCAACAGAGCTGGCTAGCTAGTAGCCGATCGAC
TCGACATCAATCAATCTGACCGGCGATTTCTGTTCTCCCTGCAGGGACTTCGGGTTCGAC
CCCCTGGGCCTCGCCACCGTGCCGGAGAACTTCGAGCGGTTCAAGGAGTCCGAGATCTAC
CACTGCCGCTGGGCCATGCTCTGCGTGGTACGTCCTCCACCTCCTCCTCTGCACCACATC
CATCAGCCATTGTTGAGTTGTTCGCTGGTAGTAATAACATGGGTTGCGCTGTACGTGGCA
TGGACAACGTGCAGCCAGGGGTGCTGGTGCCGGAGGCGCTGGGGCTGGGCAACTGGGTGA
AGGCGCAGGAGTGGGCGGCGCTCCCAGACGGGCAGGCGACGTACCTGGGCAACCCGGTGC
CGTGGGGCAACCTGCCGACCATCCTGGCGATCGAGTTCCTGGCCATCGCCTTCGCGGAGC
AGCAGCGCACCATGGAGAAGGACCCGGAGAAGAAGAAGTACCCCGGCGGCGCCTTCGACC
CGCTCGGCTTCTCCAAGGACCCCGCCAAGTTCGAGGAGCTCAAGCTCAAGGAGATCAAGA
ACGGTACGTCCCAGTCCCATCACATATACCCCGTTATCGAATGAAGAATCATACGTAGAT
AGAACAAGCTGACGCGTTCGTCCGTGGGGAATGCATTGCAGGGCGGCTGGCGATGCTGGC
GTTCGTGGGGTTCTGCGTGCAGCAGTCGGCGTACCCCGGCACCGGCCCGCTGGAGAACCT
GGCCACGCACCTCGCGGACCCGTGGCACAACAACATCGGCGACATCGTCATCCCCAGAAA
TATCTACGGCCCTTGAGCGGAGCCGACCGGGCTGAGAGGAGATCGAGGAGCCGGAGCGCA
TGGTTTTCATTCATGTTTCTGAGTCGATCCATTGGTTGATCACCTTGCCACGCTGGCTCT
GCGCGCGCACCGTCCGTGCGTGCTGGAACTGTACAACAACGTCGGCTCTCCGGCCGGCAA
CCTTTGTAATGTGTAAAGCTTAAGTAGCGGCCGCTGTTGCGAATGCATCCGTGTGATCTG
TATAAATTCTTTGCATGATGATGTGTACGGATAGTTATCACGTGATCACCTTAACATTTC
ATTGAGCTTAGGACATCCCCAACGCGGCCCACCAAACAGAAGTCATCACATGTCCACGGA
CAGTCAGACTATCATAATAAAGGATAACATATAAAGTAGTAACATGAATATGTTACTAGT
ATAAGTTATCATCTCTATAATGGATAGTAACATAGAGATTTTCATCTATTAGTTTGGGGT
CCTGATATTCATCATAGTGTGATATATTAGACATCCACACACACCGTGTATGGCGTACAC
AGAAGGTAGCCCACACGAATTGTGTGTGGGAGAATAATAGAACTGACCACATGTGTGGAC
ACAACTACTTCATGCCACACGTCCAACAAGTATTATCCATCCCCATTTGCGTGTGTAACA
CGAAGTAAATCTTGTTGGAATTATGCCCTAGA