Contig Data
morexGenes
Links



Map Locations of contig_158987 (3424 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_158987

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20444 3 1330 bp MLOC_20444.1 Available Available LOC_Os02g32030.1, FRAME:-1, EVALUE:2e-86, 13102.m03460 protein elongation factor, putative, expressed





CDS Structure of MLOC_20444






Contig Sequence (3424 bp)

>contig_158987 3424 assembly3_WGSMorex_rbca.fasta
CTAGGGCATAATTCCAACAGCCATGGCCGCCACATTGCGTCACATCATTCGCCATGGCCG
CCGCACTGCATCGCAACACCATCGCCGGCAACACTGCATCGCAGCATCCCCCACGGGCAC
CGACGTTGCATCTCAGCTTCCGCCATGGCCGCCCCGCTGCATCGCAGCACCATCGCCGAC
AATGCTGCATCGCAACATCCGTCATGGCCGCCGGCGCTGCATCTTAACTTCCACCGTCGT
CACCATGCACTGCATCGCAGCTTCTGCAGTGGCCACCATGCTGTGTCGCAGCACCTGTCA
CCGTTGTTGGAGTTGTGTAGAAGGTCGTCGATGTCGGGATGAGGCCCGTCGAGTCTGACT
AGTGCTGCAACGGAGCTCCGTCAGGGCTGCAATCAAGCCCGCTGAAGCTGCAATGAAACA
CACCGGAGCTGCAATGAAGCGCGATGGAGCTACAGTGAAGCATTGTGGGGTCGTTGAAGT
TTCATAGGAGCTGCAATGGAGTGTCGTTGGCGTCGCTGGTGCTTCGCGCGACACGCGGTG
CTGCCATGGAAGTTGTTGTGCTGATTTTTTTTGCTGGAGATGCCACGGGGTGCAGGATGG
AGGAACGGGGAGGAAGAAGACGGCTTCGTTTGCTGCCATTAAAGGGCCATCATCTGTCAC
ATCGTACGGCTAGCCAAACGGATGATTTCTGAGAAATCATCCGACTCATCCATAAGAACC
ACCTTTTTCTGATGAAGAAAAGGAAAGGAGTTACCAATGACGAAGGCGCCAAGGACACTA
TCGACCCGCAACACATTTTAACGAGTGGCAATGGGGCAAAGAGCATCTCTAGAAGACTCA
TTAAAACGCGAAACTCAAAACCGCGGTTTCATTTCACGGAAAACGTGTTTAAAGGTCGAT
TTGAGCTGCGGCCTAACAAACCCTTTAAACTTAAATTGTAAAATCAAATATTCGTTTGTT
CTTTTTCCCACATCTTCTTTTTCTCTCGCTCGTGTTAATAACCAGCTAAATTCGCTCTTA
GAAAATCGACAAAGAATGCTCAAAGCGACCAAATATAAAGTCGTAGACGTCCGGAAAAGC
TAACTAGCTAACGTCGTCGTTGAAATCCATCGAGAAGCTAGCTAGATAGCTAGCCCCGAT
CACGGAATCAATCGAGGAGAGCTAAAGCTCTTGTCGACGACGCTGAATCTGGCCAAGACG
GGCAGGGCGGCCGTCAAGACGACCGAGGCGTCGGCGGGCAGCGGCCAGGACGAACGGGTG
CTGACCGATGACTAGCGGGGATGGACGGGGCGACGGTCGGGAGCAAATCAAGAATGTTTG
GATGGCAATTGGACTTCCGTCAACGAGCTTTTTCATATACGGAGCACTTACGGATTGGCT
CCGAAATCCTTATTTTTTAAGGATTCGATGAGGATTTTTACCATACCCCACCTCTTTTAA
AAAATTTACAAGTCGGAGTCATTTACGAGATCGGATCGAGTATCTTTTTTACGCGAACTC
ATATTTTAACTGTTAGAGATGTTCTAACCTTTCTTTTAGTAAGGCTGCTAGGAATTTATG
GTTCATATAGTCATAGGCTCAATTTTTTGCCGAATCTGGACACATCCGTATTGGCCATTT
TGTTAGCCGCACTTAACCTAATTTTAGTTAGACTATTCATAATGAAAGTAACATAGATAG
TAATATAGATGACATATAAACAAAAAATATGATGTGACAGCTAATTAATAAGCAGAGAGA
GAAATTAAATAACTTAACATGTTACTTATACTAAAAGTAACATAACGGATACCAAGTCAA
GATGAGTCTATAAACTAATAAATGAAATGTTTAATGTTACTATCCTATGTTACTATCCAC
TATGAAAGTATTAACATATGTATGTTAATACTCTATGTTAGTCTTCATTATGAGTAGTCT
TATGGCAAAGCTGGTCATGAAGACAAATCATTAGATGCCATGCCTATGTTTCAACAAAGA
TTAAAAGGTTGAAGCTTACTCGCAAGTGTCATAATTACATAGAGTAAGCAGACAAATCAA
TCATATGCCTAAATTTACCATGAACAAATGCACAACTCAATATTGCTATAACCCCTGGAA
TTAAAGAAGTTACTGGGCATGAGATTCATGCCTACAAAGGTTCAATCTGTAATATTCCAA
AGAGATGCCATGTTCGGATACTCTCAGCACTGACAGATGCTTCTACAACAGAATATTCTC
AGGAAGTTCGTCTAATGTACTACTTCTCCGTCCCAAGATATTTCTAATAATTCAAGGGAC
AACTAATTCCAGGCTGAGAGAGTATATACCCATCATTGCTGCGTGTCTAAAAATTTTAGG
TAAGAACTGGAGAATTACGAATTGTATTAACAAACTCATACAAACTGCAGCATAACCAAG
TACAGTAAGTTTGAGCATATAGATTCAAAGATACAACTGCCAGAAGTTAGAACACATTTT
GATGGCCGTAAAACCTGGACGAGTTCGTCAATGAAGGCAAAATGATGACAAGACCAGGCA
GAAGAACAGCAAGTAGAACTATCAAGATAATGAGAAAGCAATAAAGCAAACACAGGATCT
ATATTTCAGTGTTCTACAGCAATAAAGAACCAGGGAGAGCTCTAGATCAAAGGCAATAGC
AAACACAAAAAACACATATACTCCCTCTGTACCGAAATACTTGTAGTTGTAGGTAGGCTA
CCGAAATACTTATAGTTGTAGTAGGCTAACTCACTACAAGTATTTCAATACAGAGGGAGT
ATAATCTAATTTAAAATCAACAGAGATAAAAAAAATGCCAGTATCACAACAGATATATAA
TCTAAGTTTTAACATCGAGAGACATCAAAACAAAGTGCCAGTACCACGACAGATAGGACA
TTGCAATAGCAATACAGCGACGGACTCAATAGACAGAAAATAGCGCAGCTCTCTTAGCAG
CATAAAGCAAACTAGACCATGTAACAGAATCAGAAGTTCAGAGCTTGTCCTCGAAATCAG
ATAGAGGGGTCATCTGTTCCTTGAGACCCTTGCGCTTGCGGATCTCCGTGACAAGGGTGG
CAGACTGGGAGCCGGCCTCCAGAGGATCAGAAGACATGATGTCCCAGTGGTCAAACACAC
ACTGGGGGAAAGCCTGGCCAGATGTAGCTGCCCTGAGGGTACTTGAGAACCCGAAGGACT
CGATGACCGGGAGGTAAGCCTTGATGTTGTACAGCGGGGTACCAGGCCTCTGCATCTCCT
CAAACACATGCCCTCTCTTCTGATTCAAAACACCATAGATACCACCAAGTGCATTCTCGG
GGGCCTGGATCTCAACCAGGTACACAGGCTCCAGCAGCCTTGGCTTAGCAGTGAGCTGAG
AAGCGTAAATGACCCTCCTGGCTGTTGGGATGACCTGGCCACCACCCCTGTGAATAGCAT
CAGT