Contig Data
morexGenes
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Map Locations of contig_1589857 (3194 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1589857

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20442 2 1206 bp AK375174 Available Available None





CDS Structure of MLOC_20442






Contig Sequence (3194 bp)

>contig_1589857 3194 assembly3_WGSMorex_rbca.fasta
ATGGCTCCAGCTTCCGCATCGCTCCTCCCCGCCGCCGCCGCCAAGCGCCCCTTCGCCACC
GACTCTGCCTTCGACCCTTCTGAAGAAGGGCAACAACTCGCGCAGGTCAGTCTCTGCTCA
GTGCTCGCTCTGTCTGTCTCTTCTCCGGCAAGCGTACTGACGCGCGCGTGTGGTGAACCG
TGGTGACCAGGAGAGCGCGGTGACCAAGAAGAACGGCGAGAGCCAGCAGCAGAAGCTGGA
GTGCCCGCGGTGCAGCTCCAGCGACACCAAGTTCTGCTACTACAACAACTACAGCATGGC
ACAGCCGCGCCACTACTGCCGCACATGCCGCCGCTACTGGACGCACGGTGGCACGCTGCG
CAAGGTCCCCGTCGGTGGCGCGTGCCGCCGCAGCTCCGGCAACAGCAACAAGCGCCGCAG
GCCCTCCGCCGAGCCCCACACGCCCTCCTCCGACTCGCCGCAGCCGGACCAGCTGGATAC
GCTCCCACCGTTCCCGGTCTTCCCGTTCCTCACCGACGGCGGCCCCGTCTTTCTTCCGCA
GTTCGACCTCGGGCTCGGCGGATTCCCGTGGACGGCACCGCCGGCCACGGACCACCTCTA
CGACGGGCTCGCGGCGCCGTCGGGTGGCTGTGATGGGGCGCTCACCCCCGCCGGCGCGTG
GGACGACTTGGGCGGCCTCGACTTCACCTGGCCACCGCCTGCCGGCAACTGACCAGCGTC
ATCATGTCAGTCAGCATGTCGCCGGCGCGTTCGAGGCTCCTGTTTTATCATCGCAGCCTC
ATGTGATGTGACCAACTAGACATCTTTCTCCACACTTGATGTCTGATAACATAGCTCGAT
CCATTTGAAGTTAAATTTTTCATGTAATTTGGATGTGGCTAGCAAGCGCATGTTGTTAAG
TACTTTGTTGTGCTAGATAAACCTCATGGGAATAGGAACTCATGCAACTTGAGTAGAGCA
ATGTTGTAATAAATGGCCATTTCTTTTGAAAGCATTGCTCCAATCTCGTGCACAAATTCA
CCCGCACTAAATTCCAAAAAGAGAAGTAAAAATTGAAACATCTGATTTTTTTTTGTGAAA
GAAGATCAACAAGGTTGACAAGATGAATTTTGCAGAATGCTAGTTGATGTTCATCGACAA
AAAAAAGTGTGGTTTTAGTTATTTGTACTATGTTCTGAATTAAATATTCATGCGGGTGTA
TTTGAGCTCGACAACAATTATCCATGAAAAAATCCAATTCCGTTCTTGGGGGCATATGCT
CCTGTCCATAAAAAAAATGTAAAAAAGGAAAGAAAAATGTGTTCTTGGCAACGGCCATGG
CAGCGACCGGCAGAATGACCGCGAGGGTCGGCACAACCCTAACATGAAAAGGGTGTGTGC
CTTGACAACGATGGCTTGTCATCAATGTCGCCCGTGCGTTGAGCGGCACGCAGCGCGGCC
ACCTTGAGGGCGATGTCCGTAGCGGCCTTCTTTTCTGTAACACCCTGGATTTTCTCCCTC
TCTTTTTTCTTTTGAATTTCTTTAAGATTTTGTTTGAAATTGCTTTTGTGTGGCTATGTG
GTCTGGAAACTTGGGAAGATCATCTCTTCCTAGTCTCCATAGTGGCTTGTCATCCTCAAA
TCCTTCCTAAGATCATGTCATTTCCCATCTTGGACCTATCTTAATATTCTTTTTCTTGAA
AATATTTCTTTTTCTATTAAAGGAATAACCCTATTTGCCTTAAGTTGTGAAGCAACCTAT
ATTTTTGTCTCTCCTAAAATTTTCAAGTAACTCTCATAAATTGTTTGGGTCATATCTTCC
TCAAATATGTCAAAAATACTTCCTTGTCTAGTTCAAAAATAATTCATGGATATTCCATTT
CCTATTCTGCCCTCAATGACACTTTGTGAAGGAAATGTCACTTCTATCTTATTGATTACC
CTAAAAAATTGTGGACCCTTTCCTATACATATTAGGACATCATGCCAAAATTCAACTTTA
TTTGCCTAGAAAATATTCCGCAGCTAATTTCCAAAGTTTCTATCCAGAAAGGAACTTTAT
GAAGTAGGTACTAGCTAGGAATATCGAAATAATTTTAAATTTTGACATGACCTTCGTATG
CTCAAATAATAGCCCTCCTCCCAATTTGAGTATTTCTCCATCACACATGCGAGCCCAGTC
AGATTTTCAGTTTGTGAAGCAACTATATTTTATACTACTTCATTATTTCTGGAACTTTAC
CAGGACCTTCAGCTATCCATATCTCTTGCCTCCACTAAATTCGTGATCATTTCATTGATC
CAAACTTCCCCTAAAATATTTCTAAGTTTCTATCTAGAGAGATGCTGTGTGAAGGAAGTA
CCACTTTGGTATATCTAGTTGGTATGAATTTTTTACAGTGCATCCCTGTTGCCCAAATAG
CTCATCTCTCCCAAGTTTCAGCTCAACCCAATCAAGCATGCGAGTGCTACTTCATATTGC
ATTTCTGCCTAGTGGGGTATATTATACAGCAAGTGCTATCTAGCTTCATCCTTTTGAGCT
GAAAAATTGTATAGATGGTCATCTTAGTGATTGATCACTCTCACCGAAAGATCAGAATAT
CTCCCAACACCAATCTTCCTGAGGAAGCAACAAACGCCTTGTTGTTTTGTTGTCTTCAAA
CTCTTTGTGGCAATATCAGTGGCCACTACGTTTGTTCCTTTGCCCCTTGGCCCTCTCCTG
TGGGTGGTCGTTCGAGCAGACAAGGTATGGTCGACCAGAGCGCGTGTCACCGTTGTGTTC
ACGTGGTTACCACGTGGATGACATGCCAATGCCCGCGCTCTGGCAGTCGGGGCCTTCGGA
TTCGTTCGTTCCCTCGCGCCCTCGACACCTAGCCATGTCCAACAGCTCTGTTTTGGCCTC
GCCTTCACCTTGGACCATGTTCCCCCCTCCGGATTCTTCCTCTTCACGTCGTCTCCGTCG
AGGAACAAAGCGCCCCCGTGACTCTGTCGTCTTCCTCTGCCATGGCATGTTGCCCATGTG
CTGAGAGCATTCCCGAGCTCTCCCTCGAACTATTTAGAGCGTGCCTGAGCTCCCCAGCAA
TCCGCTGCCCCTCCCCAATGTTCCTGGAGCTCCCCCGGCCCGCCAATGGTCGAGCCCGCC
ACCGTCAATCCCCTGGAATCGGGTATGATTTTTGGATGACTCGCCCTTCTTTGGCGAGTT
AGCTTTACCGTCCT