| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location | No map location |
Predicted Genes from contig_1589471
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_20382 |
1 |
621 bp |
MLOC_20382.1 |
Available |
Available |
LOC_Os05g19150.1, FRAME:-2, EVALUE:1e-91, 13105.m02022 protein hydrolase, alpha/beta fold family domain containing protein, expressed |
CDS Structure of MLOC_20382
Contig Sequence (3735 bp)
>contig_1589471 3735 assembly3_WGSMorex_rbca.fasta
TTGTTGTTGTTGTTAGAATCATATAGGTTGCTCNNNNNNNNNNNNNNNNNNNNNNCCTTT
TGTTGCTAACCCTAATTTGTTAAGAAAAGTTAAAATTGGTAGTTGCCTATTCACCCCTCC
CCCTTCTTTAGTCAACCATATCGATCCTTTCAAACAACGATTTCCCCAAGAACCCCCCGC
ACGCGTCTGTTATATTAGAGAAATTACCATAACATAATTTTACGTTCGCTATGAACACTT
GTGGCTTGTTTTTAATTAGCAAGAAATAACCCTTCCGTTAAAGGAACGGGAAAAATCCAG
GAACACGCTCTGTGGAGAAGGTGTAGTAGGATTAAACATCACATATGATTTAAATAGTTA
AATGTATAGTAAAAACAATAGTTGCATACATATATGTGTGTCTGTGCAACACTACTATAA
TTGTCTGAATACAAGTTCCAAACAAGTATGCACATTTTGACATTATTCCAGGACGCATTC
AGTATACTTCATTTTAGTTGAATTTCTTAATGAAGCTAATTATATGTGCATTGATCTCCT
TCGGTTTTTCCTCGTTAATGAAATGTCCAACATCTTTCATTATCACCACACCATCTAGTG
ATGGAACAAACTTTTTGAAGCCTCCTTTGTTAATGAAATCTTGTGCGCCTGCAGTATTGT
ATGTTAGATCCAAATCGCCAACAATGAACTTGGTTGGCACCTTTATCCCAGCTCTCGTCC
ATGGTGAAGTGAGATCCCATGTCCTACACAGAAACAAACCAAATATGGTGATTCAGACCA
AACCATTGTGTGTTGTAGTTGGTTCACCCTAGAAATACTTTTTTGTGATTATTTCTTTGA
GAGATCTACAGTAATATGTCTCTACGAGTGTACTGCGGATGATGTACCCCATTGATTTAT
AAGAAAACTTCACAATGTGGCATTGTCGCCAACAAAATAGAAAAGTATAAAGTTTTGGGC
AAGTGAATGGCAATATTAATATATTATGACTTTATGAGTCATATAATTACAGCTTTTGCT
CCATTGTAGCAAGGCTAACTTGTTTGTGAGACGACATCATTTATAAAATCATCGTAAATA
TTTCTTGGAACTCCTTTTAGAGAAACCTTCTCTGACACACATTTAATCAATTCTAACTGG
ATTAATTGTTGTTTTTGAAAAAATATAGAATTTATAGTATTGCATATTATATCATTAATT
TTCTTATGTAGAACAGAATTCAAGCATTTATATTGATGAGAATTATGTACGTATGCATGT
ATGCATATGTATATCATTTTGAATATTGATGATATATCCATTTTGAATAGAAATCCAGTC
GCTCTTTGTCCCGAGAATTCCTTTACCTGTCAAAATTATCATTGTACAAAAACATTTTTA
AAGCCTTGAATCAGATTTTAAGTTGAAATCTTCATATTTATGTTAAGTTCATAGTTAAAT
TAAACTTATCCATAAGGTTAAAAATCTAAAAGGAAAAAAATTCTAAGTTAAGCAACTTAT
AATTACTTATTGAAAGCACGGTAGTAGTTCAATCCCCCGGTGAAGCCAGACTTGTCAAAC
TGGGTCGTGTAGTACTTGATGTCCTCCTCTGTGATCCAACTCGGCAAGGGCACCTCATCA
TCTGGTGAGCCCCATCCACTCTTTGGGATGAACAATGGCCCAGGAGTTCGATAAGCGAAA
AACTTTCTTAGCACCAACTCTGTACCGAGGCTCCTAAATTCTGCTTCAACTGCTCCGGGC
TCCTATAAATTAGCACTAGCTCAGTCATGTTACATTCAAATGCAACTCAACAGACAATAT
GATATTTGAAAAGGAAATAACTTCAGTTAGTGCATCTTTGATTCACGGGATTCTCAAAAC
CTAGGAATAGAAAAACACAATATTAGAATGTTATCTCATGTTGAATCCTACATGGCTGAG
AACTACAAGAATTTAAAACAAAGAATGTTTAGCAACATACAGATAAATGAGATGTAATAA
GTTGTTTGAGTCAATGTAAATTTTCTTAAGACAAAGTGCAATGTCACCCTTAGGATTTTA
TTTTTTGAGGATTCCAACTAATCCTAGGAAATAACGTACATACAAAAATTCCTAAGGATC
AAAATCCTCCAAATATCCTCTGAATATTATTTGTGTCAAAGAGCCCTTGTAGCCTGGCCA
CACTAGAGAAGATGCCACATACCTGATAGGGGAATCAAACATTTTGTTCCTTCGTCACAA
AATTACACGAGATTCAAGCAATCTTATGGAATAGTTGATTGATAGAAAAAATGAGTGGTC
TAAATACAATGGTAACTTGGAGAGTATCTTCATCACTCGCATGAGATATCTTTTAGCTAA
GAAGGAATTTAATTATTTTTGGGTTGTATAATGTGTATCTGGTATAGACTCAATTTTTAC
CTAAATTTCAAAAAAGTGTCAGAGTTTCATTATAGCAGTGCCGTGAGGAACAGATTCTTC
GAAGGGACGCGTGAGGGATGAAGGAATGTAAGATGTTACAAAGAGAGGATTTACTCAGGT
TCGAGCCCTCCTGGAAGGAGGTAATGCCCTACTCCTGCCTTGGTTGTCTTTATTTCCAGT
GATGGTCGACGGAGATCTAAAGGATTGCTCGCACGATCTTGTGTTGTGATTACAACTCAT
TGTGCCTGGTGGCCCAAGGTGCCATCCATCCTACGTTTTTTTCTCCCTTGTTTATTCCCA
CAGGTTCAATCCCTAGCATTTTCCTTATATACCAACGAGACTAGGGTTACATAGCTTAAA
TTGAGATGGGTCTAGGGTTGACTACTCGAATGGCCTTGTGTCACAATGTCATCGGTATTC
AAATTGTCAGGGTGTTGCTTAGGGGTCGGCGGTCGAGCCCATGTGCCACTATAAAGACTA
GGTCACCAGGGCAGGTGAGCATATGAAGTCATGCCCCTGTTATGAAGCTTCTATTTCTCC
TGACCCCGCGGTGGCTTCGTTTTCTATGGGCGAAGAATAACCAATCGATGGGTGCCGATA
AGGAGAGGGTGGTCCTTCACATTCTCTCTCCGCAAGGCACAATCCTAGTGTCCAAGGCTT
CCCTACCTATGTGATGTTTCTTGAGCAAAACAGTCGCACTATCGAGGGTAACAAGGAGTC
CTCCCATTGTGCCATGGCCATGCCCTCCAACCTCCTCGACATGGATGAGAAGGTAGGAAA
ACTAGGAGCATCCACGCTAGAAAACAGGAATCCAAAGAGTTGTGCTTGCGTCGAGGAAGG
TCGCTTGATGGACGAGGAGGAGAAACGAAGTCGTGAGCTTTCCTAGACAAAGTCATTTGG
GGAGTAGTTTAGTCACACCATCCTTAATGCATCCAGTTCCACACAAGCATCGACCTCTAG
GGTGTTCGTCGCCTTCACTTAATGGCTCGATGATTTGGAAGCCAAAGCTGCTCTCGACGC
TATTCCATCGCGTGTTGTGCTCAAGCGCACTCGACACGAGAAGGATCTCCTCGCATATAT
TGAAGTAAAAGGGACCGAGTGGTGCTCTCACGGTGGAGATGATGCTTTTGAGGACTAGGC
GAGTATGGCCTTTTTAAACATCCTAGATGAAAAACAAGAGCAAGGAGGGTGAGGTTAAAA
CCTTGCCCCACAGTACCTCCCCATTTCTGGTGGAGGGTAAGAAAGAAGATGGGTGAGAGT
GTTGGAAATATGCCCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTGTTTAAAGA
TAATCGTTTACTATC
