Contig Data
morexGenes
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Map Locations of contig_158924 (2221 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_158924

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20334 4 1500 bp MLOC_20334.2 Available Available LOC_Os01g74330.1, FRAME:-1, EVALUE:7e-40, 13101.m08124 protein pectinacetylesterase domain containing protein, expressed





CDS Structure of MLOC_20334






Contig Sequence (2221 bp)

>contig_158924 2221 assembly3_WGSMorex_rbca.fasta
AGCGCGCGTATCTAACTTCCGCCTCCTCCCTAGTGGTGTACCCTTTGTAATTGTTACCGC
TGAAACAACTGTTATTAACACACATAAATATGAAGCAATCATCATTGACAAGTAACAAAT
TAAGCAAGCTTGGGTTTCTTTGTTCCTGACAAAAGTGCTCATAAGAGAGGAGAACATGCG
CTGTTACCTCACCTAAAAGAAGCATAACAAGATTCCTGGACATGGGGAACTAGCTAATAA
TAAATGAACAAGCATATATACGTGTACTGCTTGCTATAGGAGCATCATTCCTACATTTGC
ATCATGTTTTCAATCACAACTCAACACATATAAGAGAGGAAAAGTGAATCCAAACAGGGA
AAGCACTACACAACCAACATTGATTCTTATAACGAATCGCCATTTCACATATAGGACGGC
GAGTCACTCCTACAAAATCTCCAGCTTTGGTTGGGGTTTTACTTCTGGATGTAATTCTTA
AGGTGTGGTTCGAGATTTAGGACATCGAGGGTAAAATGCAAAATGTGCGATGATTGAAAG
CACATTCATCATTCAACTTTACACATCTTATGTGTAGTCCAAATAATATCCCAGTATGAC
AAACCAACCCTACTAGTACGTACGTAGCTGCTCATATCCGGAACAAATTACCAACGATTT
CACATTACACAACTAACACAAATTCAGTGAAAAGAGTGCCATCCACGATAGCACGCCACA
CACAGAACAAACAGGAGCAAAGAAAATTGCACACAACAAACAGGAACAGAGAAAAGATCA
GCAATCCCATATATGTTCTCTATTTACAAGAGGCACAACTCTAATGACATTTTCATCGAC
AGTAGCTGCAAGTTATCTCTCCAACCATCATAAGCAGAAACTATTCAGAAAAGAGTTGAA
CTGAATCAGTTGATGCTCAAGTCATAGAACAATGTATGCTTTAGGATCTGAAAGTCGTGA
AAGAATTAATTACCCTAAGTGGGGTCGACCATGTCAATGTCCATCTTGACATCCTCAACG
AGGCACTGGTAGACCAGCAACTTGCTGAGGCCAGCGGTAGCATGAAAGACATTTGTGCCC
ATGTAGGTGGTCTTGTCCACCATCACCGGGATACCATGCCCTGAACGTAAAGCTCCTTTG
CAAACTCTGCAGTTAAACAAAAAGGAAACACTTTTGGTTACAAATGGTGACAAGAATGTA
GCAGTATCACAGGTGCATATTACTCTGATGTTTTCAAATGTTCTAACTTCTTTAAGAACG
AAAAAAAAAACTATTTGCATGATTGATGGCATATAGCACATAAATCCCATTAGATGTACA
ATATATGCTTTGAGTAACACATGAGTATGACTTCAATGAAAGGAGGGGGTAATGGTTCTC
ACATGTACGTACAGCAAGCTGCCCGGCACAGAATAGAGCAGTACTTAGCATGCTGCTTGA
TAATAATGGCTACACAAATGATACTAATACGATAACCAACCATGACACGAAACAAATTAA
AGGCTAACCTGTCCTGGCTCCATATCTGTGCTGCAATGAGGAAACTTTTTCCGCAGATCC
TGCAACAAAACATTCAGAGAACACTTGAATCTTTCACATATGGGTAAGAGTTAATGCAAA
AAATGGTCAACTTGAGAGGGAAGAGCACTACTGTCTGCACTAGAGAGAGGGGGAGAGAGA
GACCTGTAGACTAGCAACATCATTATAGAATCCGCGCATATATCTTCTCCCACAAATGTC
TTCCCTGTAATGAACCGAAGGGAAGGACCACTCAAACAGAACCAGCAGTATTTGTTATTT
GCTTATAGGCAATTTCTCAAAAGAACTACTCTCTCCGTCTCATAATGTAAGAAATTTTTG
CGAGATGTTTTAGCTTGCAAAAATATCTTACATTATGGGACAGAGGGAGTAATAACTTAG
GCTGTGCATATGTTAACTATCTGTTAATGGACATTAAAACCAAATCAAGAACATACACGT
CAAGAAAGAAACCACCATCGGCAAGACACTTAATAGTAGACACCTTTGGTACAAGTGCAC
GGAAGTCATCACAGTGAATGTAAGTGGATAGACCACCACCCGAGCAGCCCGTAAGAAAAG
CCTAGAATTTTAGGAAATGATCAGGAACAAAGTATCACAACAAAATTGTAATGAGTAATA
GCAATAGAGAGACAACATGATAAACGAGATCAGACGGTCTGAAGATAAAACCATAAAAGC
A