Contig Data
morexGenes
Links



Map Locations of contig_158895 (7276 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_158895

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20282 2 2151 bp None Available Available None
MLOC_20281 1 1577 bp None Available Available None





CDS Structure of MLOC_20282






CDS Structure of MLOC_20281






Contig Sequence (7276 bp)

>contig_158895 7276 assembly3_WGSMorex_rbca.fasta
CATCAAGAAAACAAATAAGTTAAAGTAGGTGGTATTCATGTAGAATTCACTTAATAAACC
TATCATGTCGTGAGAATTAATTCACGCATGTATTCATGCAGATAAACCATTTCTGCCAAT
GTTATATAAACAAGGAGAGAAGGGTAATAATCAATTATAAGCTTGCTGATCGGGCGTCTA
AATAGACACCTCAGACGGACAAGTAACCCAAGCCACAGTCAGGCGTCTTAGCGACATTAC
ATAAAGGGACTTGTCAATGGAATATTACTAAACATGCCAGGGTTGGGCGTCTGGAGCAAC
ACCACAAAAAGGGCTTATATGAGATAACGATGAATAAGTAATAGCATGTGTGCCACAGTC
AGGCATCTAAGCGACACCACATAAAGGGCTCATACCAAAGTAATAACAGCTACCACAGTC
GGGCGTCTAAGCGACACTGCAGAAAGGGCTTATATAATATCAACATTGAGTATCGAGGAG
GTAGAACCGTCCCAAGGACACTCTTAGAAATCCATATACCATACAAGATTTGTCCATATC
TGAATTCATAAAAATAATATGTATCATCCCGCTTCATAGGATTCATCTTCTTTTTAGTTT
AATTCCTCCGAAGTACGACACTCAAACCGACACTTGACCAGTCAACCAGTCGTCCTTTAC
CGTGCACACGGCTACTCGAATAGTTTTGACACTGCAAAGGGTGTAATCTTTACCCACAGC
CCACGGGTTTCAATAGTCACTCGGACTAATCCCGTGTACGGTATTTTAGAAGTAAACACT
CAGAACTAGCACACACCCATTTTTCCCCGCGAAGACCCGACTCACTAGGCCTACGTTGCT
AGGGAAAAACCATAAGACAGGGAGGATCCAAACTCGACTTGCATTGGATCAAATTTATAC
CACGCGCTACAAGGGAAGGTCCATTCCCTCTCGGTCCGAGACCGGAAACACCCATGCCCC
ATGAACGGATGTATGGATTTAGTCCAGGGCCATGGATACCTTCATCCCAACCTCTCTACT
TGGTGTGTACCTGGTAATAGGTTTATGACCTACTAAAATGTATTCCCTTTCGGGAAGACC
TCGGCCAGCACGAAAAGTAAGGCGACACACTGACAAGAATCGATCTACGGTCAACTTAGG
AGGTTTAAATTTTCATGCAAGGGTCAGCACCACATGATTTTTATGAATGATATACCTCAG
TGTTACCACCATCACACCTCGGTATGCTCTCACTGACCACTCTCGTCCCACAAGATGTTA
GTCCATGGTCTCATAATAACCACGACAAACCTCCCTCTGAGGTTGTCCAGACTGGCATGG
CATTCGAGGCATGAGGTACTACCCATTCACCACCTGCATGACATAAAATCAACAACATAC
CCATCTCATGCACTCATTCAAGATATGATTTTACGTGGGTTTTTTATCAATATAACCAAA
ATCACGCATTCAATGCACCACAACCAACATCACACAACTTAGTGCAAATCAGAGTTCAAG
ATGCTTGACTTTGGAGTGGAGGAGGGTGGTGTGCACCCTAAAAAAATCTTGAAGGAAGTT
TACTATCTCCAAATTCCTATTTTTAAAACATTTAAATTAACACCCAATTTCAAAACAACA
CATAAAATTTGTTTGAAATAAATCTCTAAATAAACTAGAGGAAATTTTAGAGAGGTAGGA
AATATAGTCAACTCATTTGGGGTTTTATTAAAAAAGATATTACCACTCAAAGTTGGGACA
AATCTTGTTTTAAAAATAAAATAGAAAAGTTAAATGGTTCGGCTCAGAGTACACTTTTGA
TAAATAAGAAACATACTCGATGGCTTAAAAGCTTTCACACGCTGAAAGTGTACTCCATGC
AGTACGCATCCTCGAAGAGAAAGCGCACCTGGCGTGGTGCGCCAACAGTGAGGGAGGTCG
GCTCACCGACAGGTGGGGCCACCCTGTGACATTTGTCTCGCTCCTTAGCGCGCATGATGA
CACAGAGTTGGCGTGAATTTCTGCACCGATTCTTGGTGACTCAGGGCACCACACGACGCG
TTTCGGCTATGCACATGCTCGGGGGAATGCACCGCATCTATTTTTGAAGGCTAGGGGCGC
GTCGGAGCTTGAGGGTGAGCATATGTTCCTCCATGGTGGAGGGAAGCTTGGGCAGAACCT
GAGCTGTGTGCACTATAGCTCCCGAGTGCAATTGGGAGGGGGAAAGGGTCCTTGGGACAT
CGCGGAGCTAGTGGTGAAGAAAAGGGGCAATGATCGACTCTGGTTTGCTCGAATTTCACT
GGAGGGCGACGTCGACCGAAGCTGTCGGCGGGAGAGAAGGAGGCAGCTCTAGTTGAATTT
GGGGCAAGGGGAGGCTTCCTATGGCTGTGTAGGGGAAATTGTGATCACTAGAAGTGCTCG
GGGCTCCCTTTTATAGCTGATTTAGGTCGGTTCCGAGGCGGCCCGAAGATAAGCTCGCTG
GCGACCAAAACTAGCGATGGCAGGGGTAGCAGGGCGTAGTAGGGGCGACAGCAAGGCTGG
GCAGCAAAGGGCCAATGCAGGGGAGGTGGTCAAAGGGCAGCTGGCAGCCGGAGATGATCT
GGGCGGCGCTGCCATGGCTGGTTCCGGCTGTGGCCTGCGTCAAGTCGCCAAGGAGGCTCT
GTCGACGGTGTTGTGGGGCTGCAGGGGGTGGTCGGGGTGGCTCCAGCAGCTCGGAGGGGT
CAAGGGATGCGGCTCTGCATGAGGGGAAAGGGCCAGGGCTCAGGGGTTAGTGACGCGACA
GCTCGGGTGCACTAGCAACCATTTGTGCGTTGTGGGCGTGCTCGGTGCACGCCCACCACA
CATTCGACACAATGCCAGGTGTTGCTACAGGGCTCCAGTTACTATGGGACTTCCCAAGGG
CAGGTTATAGGTTAAGCTAAAACAGATAGGCAAGTTTTATGGTTAGTGGAGCAACTCCAT
AGAGCAGAGAAAAGATCATGCCAATTTTGCCCATGAACACAAGGTGTTCGATAGCTTGTT
AGTGGAATCAAATGGGCTTTGCTGCCAACCAAATTTTCCAGATTAAGTTCTCTTTAGGTG
TTAGTCATGGTGGCAAGGTTAGCTTGGCAAAAAGTTAAACTTGGTAATGCAAAGTTTTGA
GAAACACAATTCTAGACAGCAAGTTGGGACTATTATTCTATGCATCTAAATTCACCCAAG
GGAGCTAGGATCTTGGACTTAGGCGTTTGGTAGGGTGAACTACCACTGGTAAAAATATCA
AGGGCAATTGAGCAATACAACTTGAGGTTGGAGTACAAAACTTCAAACTGGACCATAATA
TGAAAAGGGTTGTTTTGCTAAAAAAATCAAATTGGGCTTTTGCATAAAAGTGAATCTCAT
GCATGCCTTGACATCTCGAGATTTTTGTGTAGTTTTCAAAAGAGTTTATAAAAGGGTTGC
GGTGCAAGTGTGGCCCTTAAAAGAATCGAAAAGCCTTTTAAAAAGTAATTAAATTTGGCA
AAAATATTTATAAAAAGTGTCTCCATTTAATTTGTTGAAAGAAAGGAAGTGTTTTGATTC
AAGCACTCAAGTCCCAATAAAGTTTTTGAAGGCTTCGATTTGGAGGAAATTTTTAAATTT
GAAGAAAGGAGAGATTTTGAATTCAACAGAAAAAATCCAGAAATTAGAAAATGGCCAAAT
TTTAAGGTATCCCCATTAAATTAAATAAGGAATTAAAATGAACAAAAGCCATGACTCAAA
CACTAAATAATCTTTAAAATGTCACTTGAAAAGAAAAGTTTTTGGATAGAGGCTTTGAAA
ACAGGCATGAGACAATTTATTTCTCCAATTTTTTATTCTAGGCAATATATTAATTTATAA
GAAATTTGATTAAATTTCTGGGGTGTGACAGACACTACCCCCTCAAAAATAAATCTTGTC
CCAGAGATTTGCTTAGGGAATGAAAATAATTTACTCATGAGAACACGAAATATGATCATT
CAAATGCGGGCACAAACAAGGCAATCATATGGCACACAGTCACTCATATGCAGGTGCAAA
CAGCACAACCATAATTTACACCGCCACTCATATAGTATCAGGGAAAGCATATTACTAGAC
TAGCATTCACTCCGAGGGCGGTCAACGAGGCACGAGCAAGGGGGTTCGAGAAGATACTCT
CGGACGGGGGAAAACACATTCTACCCCTCGTCAAAGGAGTCCGGAAAACGTGTCCCCTTT
GCTCTGGCAACAATGGCCTACCAAGGGAAAATCTTCAATTTTCCCACAGCTAGGGTGTGG
AAATTAATCCACTAGCTCTTGGGTCGACGCTCTTGGCGATGACCTATAGGACTAGGGTGG
TCACACACGCATTGCTCTACATTGGGCTGCGAGGCATCATTATCTCCATTGTGGGATTGC
ATCCAGGAATCCCAAGTGAATCCGAGTGGACAGTCATGGGAAGGACTGGCTCCGGGGCAG
CGCACTTGGTGAGAAGTGCTAGGAGCGTTCATGGGTGTGGTCTCACATAGGGTGCCTGGT
TTAGGGGCACATAGTATAACACTGGTGTGACCTGAGCTACGGGGGCGAGGTCTCGATTAT
CAATTCCCATGAGTCACATCACTCGGGTAGCTGGTTAGGTGCCTAGGTGGTCACGTCCAA
AAATTTATTCTAAGGCCATACGGTCTTGACGATACTGGTTATGCAATTTTACCTTGAAGG
AAAAGGCATGCACGCATCTTGCAATCTTATTTAAAATAGGTTTATCACAACCACACGAAT
ACAATGTTACAGGATGGCATGGCTACTAGGGCGTGACAGCTACTCTGGCGGACTCGCTCC
GCCTTCATTGGCCTTTGAGAGGTTGTGCGCAGTAACCAATTAGGCTTCTCCGTTTTCCGT
GGTTCCAGAGTTGACTGGACCATGGAACGGTGTTGCAGGATTGCGGTGCCTATGACGTCT
CGGACGACACGCCCTTGGCACAACATCATTGTAGAAAGCATCCAAACTGCAGTGAAGCTC
CATCGGGGTCATGGTCGGGTTGGCTGACAGAAATGTTGGGGCAGACCTCAGGAATCCAAC
CGGTCTCCCTATTAATACGGGTTGGTTGCTGGAGGTGGTTACATCTTCACTGCTTGCCGG
GGTCCAGCGAGCGATTGACGTGCGGTTCACGACCAGAGCAAAGGTGAGTAGATCGATCAG
TGCCTCGTGCGCTCTCAAATAGCGCACAACTTGCACCAAGGCAGGGCATGCCTCAGAGTA
TTTGCTGGAAACTTGGGTCGGACTGCCATAGCCTTCACAACTAGGATAATACCAGAACGG
TCGGCTATTGATCGATGGCGACAAATGTCGTTCGTGGACTATAGCTTCTCGGACTGCAAG
GTGACGGGCTTGGGCTTCGCTCGCGGCTGCTCTATCGGTGAAATGGTAAGGGCACTCCAA
TGAGAAACTCTCTCCAAATATGTGCACCGAGGCCCAAAAGTGACGGATGGCATCACTCGG
AGGGTCCTTTTGCACAATATAAACTGGGGGCTCTTCTATGCCAAAAACTTGGCGGTTGAT
GTCGGCAAGGATGGCTACGAAGGCTCCAGGATCAGATGCGATGGTCTCGTTGCAAAGAAC
ATGGCCAGACATCTTGTTGGTTTGAGGTTACTGTGTTGGGGGTGTCAAGGTGGCGGTTTC
CTCGGTTGAGGCAAGGTTCTACTGTATAGGCTAGGGAGTCTTCCATCGCACACTAGGGAA
TGCGACAACTCCGGTGTCGGTCATAGACACATAGCTTAAGGGTTGAGCTGACAGGTTAGG
CACCGACTTCCAAAAGGTGTCGGATGGGCACTCTAATTAGCTATTGGGTAGGCTAGCATG
GGTTGTGGATATATAAATATCTAGGCTAGGGATAGCGACCTGGCTAAGATAGGTTTAGCG
AATGGTCAGACTGGCTCTCGTACCAAGGTTGTGATGACCTGTTTTTCCAAAAATAATTTC
CAGAAAACTGGCCTTTGTGTTCACCAGCCCCACGACTATTGTTAGCTGGTCGACACTAAC
TAGATACAGAAATCCCATGAAAAATATATAATCTGGCTTATAAGACCATGAAGGTCCACT
CGTTTGGACAAAAGTGTGAGGCTGACGGCGGAAGCGACTCGAGGANNNNCCAGTGCCCAT
GGGACTCCATTCCCAGAGGAACCACTGACCTGGATAAATTCCCATCTCACAAGGCTGCTA
TCCTCGACTCCTAGGTTCTGTGGTAGACGGCATCATGCTCCTCCCCGAAAGCAACCTGGC
CAAGACAATAGCCAGGGACAAGCCATTGAGTACTTTGAATGTACTCGTAAACATTAAGAA
AATAGATAAGTTAAAGTAGGTGATATGCATGTAGAATTCACTTAATAAACCTATCATGCC
ATGAGAATTAATTCACGGATGTATTCATGGAGATAAACCATTTCCACCAATGTTGTATAA
ACAAGTAGGGAAGGGTAATAATCAATTATAATCTTGTCGATCGGGCGTCTGAAACGACAC
CTCGGAAGGACAAGTAACCCAAGCCACAGTCGGGCGTCTTAGCGACACCACATAAAGGGA
CTTGTCAATGGAATATTACTAAACATGCCAGAGTTGAGTGTCTCGAGCGACACCAAAAAA
AGGGCTTATATGAGATAATGATGAATAAGTAATAGCATGCGTGNNNNNNNNNNNNNNNNN
NGCGACACCACATAAAGGGCTCATACGAAAGTAATAACAGCTCCTAGAGTCGGGCGTCTA
AGTGACACTGCAGAAAGGCTTATATAATATCAACACCGAGTATCGAGGAGGTAGAACCGT
CCCAACGATATTGTCGTGGTATTTCTGGGACAAATGTCATTGGGTGGCTTAACTCGTGGT
TTGGGGCCGATGGGCGCCGACGGCATCTGGGAACGGGTATTGGCGCAACACACATGACGT
CGGTTTACCCAGGTTCACGACCCTCCGATGAGGTAAAACCCNNNNNNNNNNCACGACCCT
CCGATGAGGTAAAACCCCTANNNNNNNNNNTGTGACTATATGAGAATCACAGTACAAAGG
TTGCTCGTTGAGCTGTTCATGAGGAAGGAGACGGAGCACTTGTTGCCGGTCTCACTGCCT
CAAATGTTGTTCTACGTGTGTCTGGTGTGTCTCTCTCTAGATCCTATTGAGCGTGATGGT
GCCAACCGTGTGAACGTCCGAACCTCCGGGTGCCTCTCTCAGTGGGCTAAGGTGAGGCTT
TATAGTGTAGACAGGTGATACAATGATAACGGTAGGATAGGAGGTGGGGGCCGGCTGCCA
GCCTCTCGGGCCGGCT