Contig Data
morexGenes
Links



Map Locations of contig_158892 (5414 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_158892

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20277 1 754 bp AK362184 Available Available None





CDS Structure of MLOC_20277






Contig Sequence (5414 bp)

>contig_158892 5414 assembly3_WGSMorex_rbca.fasta
CAGCCACTAACCGGGGAGGAGGGGCTCCACCACCACGGCATGGGGATGCCGTCCCGAATG
GAAGGGAGGGGTGATCCCGTCCGTGCTAGAGCTTGGTAGGGTAGGGGACAGGGCGTGATC
GAAGAGGCAGGGGCTGCCCATCTCAGTGTCGGGATGTGGAAGGCTTCGTGGAATATTAGA
AAAGTAAACGACGAAGATAAGACTATGAGCGAGCACGAGCCAGGCTGCTGGTTTCTTCTA
GCCAGCCGACATGTTAACTAGCTAGCGTGGCTGCATCACACATGTGTTTACTCTTTTCCT
TCTAAGAAAAAATATGTTTGCTCTTCAAACTATGCACAAGTCTATTTTTTTTATTTGGAG
TTGAAGATGACTCATCTTTTTTTAATCTGATTGTTTATGTCCATACTTATTTTTTAAATG
TTTGCAAATAGTATAAAATGTTCATGAATTCAAAAATGTTCTTGATTTTAGAAAGTATTC
AAAAATTTGTATAGGTGTTCATGAATTTGAAATTTTTCATTGCTTCAAACATGTGCACGA
GTTTTAAAAACTCGTCATGATTTCAAAAATTCTTCATGATTTCATGAAATTAGGAGTGAT
AGTGTATGTCGATGATACAACAAAATATGGCTATGACCATTTAAAATTATGTTTTTCCCG
TTGCAACGCACGGGAAAACCCCCTGTAGTTCCCTGAAATCAACCCGCAGTCCGGATTTAA
GTGAGAAAACGAATCGTTTTTTGTAATTTTACAGAAAACCCATTGTACTTTCCCGAAATC
AACCTGCCGTCCACGCCGTCGCCGCTCGCCCGCGGCCTCCTGCTTATGTAGTTGTCGGAT
TTGTGTTATGGGATTGAAGGCAAAGTTTCAGAGGCAGTAAGGTAGCGCAGTGGCTCCAGT
CTTACGTCTCTACTTATGAGACCCAAGTTTGAATCCGGTTACTCCCTTTTTTACAGTTTC
GGCCCACCTACTATAGTTTTAATCTTTCTTTTTCTTTTCACAGATTCCAATCCTAAAAAA
ATCATATTATATATAAAAATTCTTCAGAAAATAGGTAGATTCTAAATATGCTATTACCCC
GCATGTTAATTATTTTTAAAATTATGTTTAAGATACACTATTATATTTTGAAAAGGACAA
TTATTTTTTATGTCTAATAAATTACACACACACTTAATACACTAATTAATAGAATTATAA
ATTATCCAACCTTTATGTCTTCGCACAACATCACTTATCATGTTGTTTCACGTATGACAT
TGTGAAACATTTGAAGGGATTTGTTGATGCGTCGGGTGTGTATGAGGTTATTTTTCTAGG
ATATATTAGGGATGTTTTCTCTTTTTCCGTTGCAACGTACGGGCACGTTTGCTAGTTAAA
CTAAGAAGAAGAAGAATAAGAAGAAAAAGATGAAAGTCTGCTGAACCTCCTCACCCCGTG
TGGGTGTGGCACACGCACGCAAACAAGTGTGATGAATCCTCCGTCCGTCCATTCGCCTGC
CTCTGCCCCGCACCGCACATGGCCTGTCGCCGCACTTGTGATTCGCACGGCGACGGCGAC
GGCGACGGCGACGACGAACGGCAGCAGCACCTTTCACCACGACCAACTTCCATCAGTGCC
TTGGCGCGGTTTGCAGTTGCAGGAGGAGCCAACAAGATGGCCGGCCAAGTTGCCTGCCCC
ATTCCGGCAGCATGCAGGTCCCCTGCCGACGCCTCCGCCCGAACCAGATCCAACCTCTGC
TCAATCAATCAACAAACCATGCCATTTGTTCTTCTCCGATTCGTCGACGATTGATGCCGA
AAGAATCAAGCCTCTTTCGTTCCCGCTGAACTCAACCTGAATCTTTTCGGCGAAACAACT
CGACCTGAATGCCAGTGCAGCTATTTCGCACTAGTACCAATAATTTCAATGCTGCTGCTG
CTGCTATATTTAGCCTCTTTCGGCCACTTCTTTCAATGCTGCAGTGCTACTTGATTCAGT
CGGGAACTGGATGTCCTTGGCAATTCAGTTAATTATTACTAGTTGGTTTGAGATCAAAAT
CGTCATGTTCATCAGAGTGATTGATGACTTTCTACACCAGGAGTGCTACCGTTACTGCCT
CCTGCCTGCGTACCTACCCATCTGTCTCCAATCCCTGATGAGTGCTTTCACATTGCCTGC
TCTGCTGCCCATCTGATTCAGATACTGGTTGCTGTAGTACAGCAGCGTTGCCAGCAGGTT
GTGCAGTGCAACTTGTCTGTCGTCGGAAACTTCACCAACTTCTTTTTTTTTTCCAGAACT
AATCCTCCTGGCAACGCACCGGCTGGAAAAAAAGAAGAAGAAGTTGATGTTTCGTGATTC
ATACACAGCATCTCTTTCTTTTATCGAGGGTTCTAGCAATTGATATCCTTTCGCAAATAA
TTGAAATGCAATTTCGTGATCTGGATCCTGTGTTACAGTGTCAGAATGATGTTTCCGCAT
TTTGTGAATGACAAGAAAACAGTTAACGGAAACACATGTTATATGGTAACAGCAGCACGG
CCATGATGCCAAATAGGCATCCGTCGTAAAGATTTTGCTGGGTAAAAATTAATCCAGAAA
TGTGTCCGCGGACATTTGATGCCGTCCATTTGGTGAGCCGCGTTAGTTAGTTAGTTAGTT
AGTTAGTTACAGATCATGATCATCATGTTCATCAGAGTCATCGAGGCCTTTCCATTCTTG
GAATGCCACAGTACTGATTCCTGCCTGCCTACCCATCTGTCCTTCCTGATGAGTTCCGGT
TCATCTCAGATCCTGGTTGCTGCATTGTTGCCAGATGTGCAACGCATCACAAAGCTCACC
AACTTTCTGTTTCCTGGATGCGCATGGTTCATCGGTCTGACACTTTAACCATTACTGTAG
ATTTGTTTCCTTGTAAGGCTCTCGTCTTCGGGTTCAGAAATAAGAGTGAGCTTTTTTATC
CTGTGTAGAAAAGGATTGCTTTTGTTGTCAAATACAAACGTCAAAAACTATGTGCAGACG
CAAGTTAAGCTGTTAAAAGTCACCTCAGATTGTCAAGACCCAGAGGCACGGGGGTTTACC
GATCCGCCCCCGTCTCCGTGAGGCTGAAGCCGTTTAAAATTGACAGCAAAAGTAACGGAA
ACACATGTTTCATGGTAAGAATATCGTCGACGTAAACCATGATTTGCACTCTGATTGGTC
ATGTCTCTATCGATAATTTGGAAAAGAATGCATTGCTACATGATACTACATCAGAAAGAA
AAGAATGGTAACATACATGTGACAAGGAAAGGCAACAAGCCTGAAGAAATGCTGCTTGAA
GCAGCAGCAACCACATCCATCACACCCAGAAGCTTCTAATGACACACAACACAACAGTGC
CTCACCTCCATCATGATCATCACCATCACCATCCTCATCAGAGAGGTGAGCTGAGCTGAG
CTGAGTGAGTGGTTTTGTGTCTCTGCACTGCAACTTGCAGAAAAGGTAAGGCAGAAAAGC
ACAAGCACCCAGCACACAAGTTGGCCAAAAAACAAAACGTTTTGTGCCATTCTCTACTGC
TTGTCACGGGGAGAGGGAGGGATCTGCCTCATATCTGTGGATGCTCTGCCTTTTCTCAAT
GAGGGAAAGATGAACAGGGCCAAAAAGGAGGCAGGGAAAGATTTTGCAGAAGTTGATGGA
AAAAGGAGGCAGCCAAAGCATGAGATGCCAAAGCTAGTGCAAGTCTGACTCATTTTCAAT
TCCATTGCTTGGTGGATCCAGCATCATCATCATCAGTATTAGTAGTAGTAGAGATCTATA
CAAGAGAATATTTTCCTGTTTTTTTAAAGGACCTAATTGCACACAAACAATGCAACGGTC
AATCCACAAGGTTGGAAAAAGATGGAGATGCAATCAGTTAAAAAGTTGACCAGGTGAGCA
AGGCAGGTACTAAATGCTGGGTGACTCACTGCAAACTCATTTTGGTTTATCCGAAAAAAT
TACACTCGTAAACATCCGAGGCAGGTTATATATGCTTGAATGAATGGATAAATGATAGAT
GTGGATAGGTATGTATGTGTGAGATGTTGCATGAGGAGTAGGGTTTCCAATAACATGAGA
GCTGACCAGAAAGCAGGATCCAAGAAGATTGAAAACAAGTCCACTTGACAATGTGCATGA
TCAGTACTGAGCACTAGTATTCCCTGTCTGCTCGTCTCAAGATACTACAGCATCAAGCAG
GTTCTTGACAATCTTTTCCCTTACATTCTCAGTATCCACACCAGAAATTATGGACTAGTA
CCAAGCATCACCAGCATCATACCTCTCTCTCTGCTATGTTCTGAAAAATCCCCATAATCA
ATTACTTACTCCAATAATAATACAGGCAGTGAAGCTACAGCAAAGGCCATATTACACTAG
GCTTCTGGTCGGTTTTCGTTGAAATGGATCGAACGGTTGCATCTTCTAATACAACATACT
CCGGTTCGCGGCCAGCTGATCATGTAGAGGACCACACTGAAGACCCTGATCTTGCAAACC
CATGCCATAGCTCGGCATCCCCATCGTCCGGCTCGGCGAGTTGTATGGCGCATTCGCTCC
GCCGTGCTGCTTGGTGTCGGGTGGCAGCGAGAACTGCCCTGTTGCTGAGCTCGGAGCCGG
TGCGCTGGACTGGGTGATCATGGATGACTGGGACGGCGAGGGAGGCTGGTCGTCGGTCAG
GTGCACCGTGGTGATGTCGTGGATGCTCGACCTCCTCTTGTCCTTGCCTCCACCGGAGCT
GAGCCTGATGAAGTACTTCTGCGCGTGGCTGGCCACCTGCGTCGGCGTCCTCGTCTGCAC
GAAGTTGCGCGAAATGTTCCTCCAGTCCCCTTTGCCGTACTTCTTCAGGCCTAGGAGGAA
CAACCTGGACAGAAGAACATAGGCATATGATCAGCTTCAGCAACCAGTAGTATTGATCAT
GAACTACAGCTCTACATCAGGCTACATGACACCAAAGAACAAAGCATGATCAGCCTCAGC
AACTAGTATGGATCATGAATTCTTGTTCTACATCAGGCTACAAGACACCATCACACATCA
TGCTACATGTGACTGTCTCATCAGTTCCTAGTGAGCAAAGACAATTAATTCAGTTTCAGA
TAGCGGTTCTTGTTCCTCCATGGTTGAAGTGAACTATTCTTCCGATTTGGCAAGTTTTAA
ATGCCGGCATAGCCATCTGATGATGTAAAGCCTGTTGATTGATGGTGAATTCAAGAAAGA
AAATTGATATCGCTAAAACTAGACTTGTGCATGACATGGATGGAGCAGAGCAATCACTCT
CACATGGAGTTGCAGTCAAGAATCGCGGTGGTGGTACTAGTACTACTCACTTGTGCTCGT
CCTCGGTCCACGGCACCCCCTTCTTCCTCTCCTGCTCCGGCGTGCGGCCGCCGTGCCGCC
TCCCGCCGCCGCAG