| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_1588706
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_20236 |
1 |
209 bp |
None |
Available |
Available |
LOC_Os09g39500.1, FRAME:-1, EVALUE:9e-36, 13109.m03961 protein ubiquitin fusion protein, putative, expressed |
CDS Structure of MLOC_20236
Contig Sequence (3336 bp)
>contig_1588706 3336 assembly3_WGSMorex_rbca.fasta
TTTTTGAAATATACTTGGATAAACATATTAGTCCAATGATGCATATGTGGTGATCAATTA
TCAAAACCATCCTAGGGAGCAATTGTGCTTTCAATCTCACCCTTTNNNNNNNNNNNTGAC
AACATATATATCAAAGCTTCGATAAAATATATCAATGATTAGCATCGATGCTTTNNNAAG
TATGTGAAAAGCAAGATCTCCCACTAAATTTGTGCATTATTTAAAATTTTGGTTTGAATG
CAAATGCACAATCAATTAGGATCATGAGTCACTCTTCCATTTCATATACATCTTGGTGGT
GCGCAAACAAGATAACAGTGATTAGTAATGCACATTACACCAACAAGATAAGTGAATGAT
CANCACATAGATAGCTAAAAGATAATAGTGTAGCATCCAACAGATAAAGTGTATGATCAA
ACACGAGAACTGGATAAAGTCATCCAAAATATCAAAGTTTGTAAAACAAAATGAGAGAAA
ATAAAGTCAAAATCTCTCTCTCACTCGAAGCCCTATGATCCAAACACTTCTCCCCCTTTG
ACAACAAGTTACCAAAAAGTTCAAAAGAATAGAGCTAATCGTCTCTCTAGGCAGCCGATG
ATGGAGTCGACAGGAGAGCATCCACAAAGTCTTATGCTGAATGTCCTGGAGCTGGAGGAT
TGGATATTGGAGGTGCTTGAGATGGGGCTGGATCTGAAGGTGCACATGCATATGCTTGAG
ATGATGAAGTATGTCTTGTCTCCGAAGCAGGTACAACAACTACCCTAGGACTGGTGTTGA
ACTGAGTAGTACATCTTTTTTTCTTCTCGTTAAGGCATGAGAGGAGTTTTTAAGGATCTT
TTATCTTTTTTTGGAAGATCGATGAGAGCAGTGGATTGGTAGCAAAAAGAATGAACAGAT
GCAGCTTACATGTGAAGGACTCAAACATATTCATAAAATTCCAACCACACAATTCCAAAC
TACACAGTTATAGAGACCCAAAACTATTACGTGAAAGATTTTAAAAACATTACGTAGAAA
ATATACTAATAAAACTACAGATAAACCCTAATTCAAGCCCCTGTAAAACCCCAAACAGTA
TCTAGCAAGCACAGCCCATGAGCGCGACGATGAGGCGGAGCACGTCCCCGACCTTGATCC
TGTAGTCCGGCGCCGTCTTGTCGTTCGTGATCTGCTTGCCACCAAACATGAGCCTTTGCT
GGACAAGCGGGATGCCCTCCTTCTCCTCGACGTGCTCCTTGATCCTGTCAACCATGTCCG
TTGGCTCGATGTCGATCTCAATCTCCTTTCCGGCAAGCGTCTTGACCTTGATGGAGAGGT
CACCGCGGAGGCGGAGCACCAGGTGCAGCATCGACTCCTTCTAGATGCTGTAGTCGGCCA
GCGTGCGGCCGTCCTCCAGCTGCTTCCCAACGAAGATGAGCCGCTGCTGGTCCAGCGGGA
TCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGCTGCTCTCCACCT
CCAGGGTGATCGTCTTGCCCATCAGGGTCTTGACTTCATCTTGTTGACGATGGTTGCTTG
CTTGCGGAGAGGTGCGTCCTAGCTTAGTTGACGGAGCTTCGCCGGCCGCGAAAAGGCTCG
AGTACTCGATCTCTAGCATGTTGGTTGCTTCCTTTCGATGGGGTCGTGTGGAGTATATAT
TGATGGAATGCGTGCGTGACCGTGAGCTTTGTGTGTGCTCGACTCGGGTTTGGAATTCGA
TCTGTGTGGTGCCATGATATCGTGCGCAAACTATGCAAATTTTGCACGCTTCTTTTCGCA
TACGAAAACATTCATATAAGTACAAGAACATTTGTTTTCATATACAAAAATATTTTATGT
GAAATATATGAACATATATTAGTGTACTCCATATTTTTATATGTGTTAATAATTCTTCGA
ACGCATGATTTATTTTACATATTAAAGTAGTTCTACAAGGTTAGTGAAGCATATATGTTT
TAAAATATATTTTTAGAAAAAAGAAAGAGAAATCTTGTTAATGGGTCGAACCGAAGCCAA
CCCATTTAGGAAAGAGGAAAGTATATTTTTCACCGTGAAAACTTCCTTGATGGATCCATA
TACCCCTCAACTATAATTTTAACCCTCAGTTATACAAAAGTGGATAAATGTGTCCCTTTA
GTGGTTTTGGGGATAATTGAAGGCGGTTTTGGCCGTAATAGCTTGGTTAATAGTATAGCC
AACAACCACATGTATAAAGTTGCCAAGTCACTTGTAACAAATCTAATAACCCACTCATAC
AATAGGTAAAGATAGCACTCCCTCCGTTCCTAAATATAAGATTTTTTATAGATTCCACTA
TATACCACATACGGATAAAAATAGACATGCTTTAGAGTGTAGATTCACTCATTTTGCTTC
ATATGTAGTTTATGATGAAATCTCTTAAAGGTCTTGTATTAGGAACAGAGGGAGTAGTAC
ATACTATACCATTAATATATGGCCCACCTCTTTCTCCCACAAAGGCTATTGGAGCTCATG
CTATAACCGGCTGTAAGTTTGTAGTTTGTTTCTCTTCTGTCTCCTTTACCTGGACTCTTA
TAGCCCACCTATGTCATTTTATTGTACTTGCTTTAATGATGTTGACTAGGCATTGGCGTG
TTAAGGTGATGTGGCAATTGAATGATTCACTCCAATGCGCCATCTCGCACGAAAAACCTA
GTTGCAATCCTCATCTCCCGCACTAGAAGGCGGTTAGCGGCAAACCCTAGCACCCACCAA
GAGTCCCCATTAGGGTGATAAATCATAACTCCAATCCATAGCAAAAATCAATGGCATGGT
CCTACGCTATCTCCTCCACCAGTCGTCGTTCCTCTTTGCTAACCATGGTGTCGATGTCGC
AATCGTTGGTGTCGTATCGAGGGGTGCAGGATTGGAGGGGTGGGAGACGATGGAGTACGA
GCCAGAGCAGCTCTTCCATTACCACGTGAAGACGCCTCAATGGATTACATGGATTGTGAT
GAATCCTATTGAGAGGTAATACAACTGCGCGAAATTGAAAGTAAAGTTTATTGCTTCCAT
TTGTTTGGCCCGATGGCTTCACTCCATGTGTGCTACACTGAAGATCCATAATTTGTGTTA
GGGCGTGGATTGTCATTTCTAACAGGATGATCCAAACACTCAGTTCGTCACCCATTTGCT
TGGTGATTTGCATGATGTTGTGAACCGTGTTAGAGCATATCTCTCCATATGNNNNNNNNN
NAATTGATGACAATTCCTATGGACCAATGGTTGCCTTAAGTTATATTTACAGGATTTGTC
CATAGGCACTTCTTTAAGTCCATCTGTTGGGTTCAA
