Map Locations of contig_1588488 (3696 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1588488

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20198 1 1822 bp AK360230 Available Available None





CDS Structure of MLOC_20198






Contig Sequence (3696 bp)

>contig_1588488 3696 assembly3_WGSMorex_rbca.fasta
TCCCATGCAAAGTTCCCCAACAGGAGCAAGGAGGCGGAGACGTCATCGAGNNNNNNNNNN
NNNNNNNNNNNNNNNGCCGTCCGTTTGGCACTTGATCGAGAGTTCGCTAGACAGATCGTG
ATAGGATCGCGAAGACGTTTGACTACATCAACCGCGTTTCTTAACACTTTCGCTAAGAGA
TCTACAAGGGTATGTNNNTACAATCTCTCCTCTCGTAGATGTGCATCTCCTAGATTGATC
TTCTTGAGCGTAGGAAAAATTGTGTTTCCCATGCAACGTTCCCAATACGAACCTCCTTGA
AAGCTTAAGAGGTTGAGGAAATCTCACGTCGCCCAGCCCAGCCGGTCTTCGGCAGCTATT
GGGGATGCTAGTTTTGGATCCTCCCAGGATGCCTTCCCCCTTCAATGGAGGAAGAGGCCA
CTGTCGCATAGGTACTTTGCTTGATGCTTTTAACATAATAACTTTAATCCATATGCCGTT
TCAACCTCGTTTATGTTTATGCTTTATATAGCCCCCAACATCGTCTTCCCGAGGAGGTGG
ATTCGGACAACGTTGTTCCACCGGCCGAACTGGCCGAGAGTTCTTCGGGATTGGAGGTCC
CTCCCATTCCCAGCTCATGGTGAGCTAGGAGGGGCTTCGTCGCATTAGGCCCCTCATGTG
GTAAGCACATAGGGGCTTTCTCGCATCAGGCCCTTCCTGTGAAGGATTTGAACACCAGTG
GCTGGTTATGTCATATTTCTCCTAACCATCCAACCTCAGATTGGTTCGCCGCAATTGTGG
GTTGATTGCACACTACTCGCACCTACACAAAGTATATAAGCCTAACTTGTTTTTTTGTCT
CCAAGCCAATTGAGACAATATGATGTCTTTTTTCTGCTTTTTTTTACATAAACCACATAA
CTAGGCCAAGGAATGTTTTAGAGAAAAAGGGCATCAAAAACTGAAAAACAACAACCAACA
ACCAGCAGCCTGTTGGCAAGGAACAAGGAGCAAGCGACATGGAACGCAACAACAAAGACG
ATGTTATTTGGTGTCAGGTGGATGAGATTAAATTGTATCTCATCCAGATGAATTCTAAAC
ACTTTGTACTTTCTTTTGGTTTTTGTTATCTATTTTTCTTTTGTTTTTACGCGGTAAAAC
GGACCGACGCACATGACATGGGCCGCGTGGCACCACCGACCCGGGCGCCCACCCGGTCCA
GTTAAACACTTGAGCATTTCCAATTTTTGTGTGAACTCAAGTTTCTGTACATAAATTAGC
GAGGACCAACATCTGCAGCCTGTAGGATAGGATGATCTATAAATCTCTCCCTTCCTTGAG
TTTCTGAGCAGCACAGCCCGGCGTAACACGGGATAAACCCCCCACCGACGCACCCAGCCG
ACGATGGTTTCTCATCATCACACATAAACAAAAACAAGCATTGTTGGCGACCAATTATTC
CACAAGATGCGAAAACTCCCATCCTCACGACTTGGTCTTGAACGGGACGTAGTTCTTGAG
CGACTCCGTGACGCCCTCGATGGACGCCACCGCCGCGGCGAGCGACACCAGGAAGCAGAG
GAAGCTGAGCGTCTGCAGCGCCACCCACCTCGTCGTGTACCTCTGTATCCCCCGCTGCCG
GATGTACATCTCCACGGGGAAGTAGACGGTGAGCGGCCAGAACCCGATGGCGCCCAGGAA
GCCGAGGATGTCGTTGAAGAAGGGCATGAGGATGGCGAGCAGCGTGCTCACCATCACGAA
CGCCGTCCTCCACGTCAGCCTGAAGAGGTTGAGGTTGAACCCGAGCCGCTTGCCGGCGGC
GACGCGGTGCTCCCGGGTGATGAACCCGGCGTTGGGCCAGGTCGCGGCGGCGAAGTTCTC
CACGGCGGCGAAGATGGGCTGGCAGAACACCTGGTATGCGCCGACCAGGTGCACGACGAT
GCAGACGTTGGCGAAGTCGATGAGCCAGTAGGGCTCGTAGAAGCCGAAGCCGGTGAGGAT
GTTCCCCTTGGCGCCGTTGCCGAACGCCGCGTAGCCGAGGCAGCCGCACAGCATGTAGAA
GGCCGTCGTGGTGGACACTCCCACCAGCGTCGCCTTCTTCATCGTCTTGTTCTCCGCCGG
CGGAGACCTCACCGTGTCCTACAACAGGCTCATTCTGTCAGACTTTTCTTTCATGTTCAC
TTCATACATCATCAGGCAGGCAGCGCTTGCTCACCTGGATCTCTATGAGGATCATGGAGT
AGGAGTAGGCGAAGGCGATGTCGCCGAGCGCCTGGAATGCGAGCCAGATCTTCTGGGCGG
AATCGACGTCCACTCCAACCTCGGTGCCGGTCAGGGTGGACTTGCCGGTCGGACCCGATA
TGGTCTGCGCCAGGGAGAGGCCGACGGCGATGGAGGCGTAGGTGAAGGACATGACGGCGG
CGAGGATGGAGAGCCACCACAGGTCGTGGAAGTTGGGGACCTGGGAGAAGAAGATCTGGA
CGACCCCGAACACCACCATGTACATGGAGTCGTACACGCCGCAGTCGGCCGCCCGGCCGT
TCTTGTGGAAGCAGTTGGCCTTGTTGATAGCACTGTTGTTGACGATCATCCATGCATCCA
TCCAGTCAAATGTCAAAACACAAAATCTAGATACATTGGAAACTTTGTCGGATGATGAAT
CATATCGACTTACGCCGCGCTGATGGACGCTGTGATCGTGTACCCGATTGCAGTCCCGAC
CAAGTTGACGTACTGGAAAACGCCACAGGCCCACACCTGCCAGCGACCTGCACAGTGCAC
ACACACACACAAAGCAGTACGCCAACATGGTTAGAGCTGCGATGCCATCTCCAAATTTGA
ATTCGGAAACGAGTTCCTCGGTGGTCAGATGGGTTACATGAGAGAGACACGAGACTTACT
CAAGTAGGATGCGACGGCGTCCATGTAGGTGTAGTTTCTCTTCCCGGTGAGCGGATCGCC
GGTGCGGTAGCAATCGGCGAGGAGGCCGGAGGTGTAGTAGGTGATTGCGGCGAACAGCAT
CAGGGTGACCGGCCCGACGACCCAGCCGAGCTGTGCCGTCGCCCAGGCGAGGGAGAGCAC
GCCGGAGCCGATGACGGCCGTGATGATGTGCGCACTGGCTGTCCATACCGTCCCTGCTCA
ACAAATTGCATAAACTGTCAGTCAGTGCCTGGAAAACTCTTGGAAGTTTTAGTACTATTC
CGTCACTGTAATTGCTGTAGAAATGTTACGGTTACACTTACAAAACACTCCGCATTTTGA
TAACATCTAGCACTAATAAAATCTACCGATTTTCGCAAGGAAGATAGAATGACGATTTGC
ACTACAGTGTGGAAATGTCAGTAAGAAGTCATGAAAAAAATCATATGTATATTACTACAT
TTTTGTGACATGTATGAACCTAACAATTTTGATCCAAATTGTTCCAGTTTTGCATGTTAT
ACAAAGAAGTAGTATGATAGTCTCAAACATATTGCAAGCGTACATAAAAAGCATCTACAA
CCGCAACATGCAAATCCGGTGGGCGCGTACGTGGACACTGATAGGTCACACCTTAGGGTG
TGTTTGGTTTCAGTCACCAACTGGAATGGCATGGGTCGGACCCGTTCCGAGGCTCTGTTC
CTGTGTTTGGTATGTAACTGGAACTAGAACCAACTCGTTCCCACTAAGGGAATATTCGGG
CCAGATGCGGAATGCGCTGGTACCTCCAAATTGGAG