Contig Data
morexGenes
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Map Locations of contig_1588469 (4752 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1588469

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20191 1 356 bp None Available Available None
MLOC_20190 3 4039 bp MLOC_20190.3 Available Available LOC_Os06g04270.1, FRAME:+2, EVALUE:0.0, 13106.m00379 protein transketolase, chloroplast precursor, putative, expressed





CDS Structure of MLOC_20191






CDS Structure of MLOC_20190






Contig Sequence (4752 bp)

>contig_1588469 4752 assembly3_WGSMorex_rbca.fasta
CGACGAAGTTCTACGACATGGGCTGCGCGCCCATGGGCCACATCCTCTACGACGAGGTCA
TGCGCTACAACCCCAAGAACCCCTACTGGTTCAACCGCGACCGCTTCGTCCTCTCCGCCG
GCCACGGCTGCATGCTCCAGTACGCCCTCCTCCACCTCGCCGGCTACGACGCCGTCAAGG
TAACCCCACCCGACCCGACCCGACCCTCTCCCCGTCCTCTGCCTCTCCCTTTCCTGTTGG
CTCGGGCGGCGAAATCGGGAGTAGGTTTGTGCAAAGCTGGATCTTTGTTAGGTGGAACAC
TCGAAAGGCCAGATCCTGGCTGCTATTTTTCTTGGGCCGATCCTTTCCTAGTAGAAAACG
CCGTGCCTTTGTCCACTTGTCAGAGATCTGTTCAGTTAAATTCAAAGCTCCTGCCAAAAA
TTTGTTGGAATCTCAGATTGTGCACCTTGGATTCGTCACTCATGCTTACTGTTACTGGAG
TAGTTTCTAAAACCCGCAGTAATCTTCTTAGGTATTAAACATGGCTGATTTGGTCCACTG
ATCTTGTTGTAACCGTGACCCCCTGTTCTGCTGCAGGAAGAGGACCTGAAGCAGTTCAGA
CAGTGGGGAAGCTCCACCCCGGGACACCCCGAGAACTTCGAGACTCCTGGAGTTGAAGTC
ACCACTGGTCTGTCCATCTCAGCTGAGCTCACAGCAGTTCTGATCTGCCACTGCCATGCC
GGAGCATGAGACTAATTCGGACTTTTGCTTGGCTTATGCAGGTCCTCTTGGCCAGGGTAT
CGCGAATGCCGTTGGGTTGGCGCTTGCTGAGAAGCACCTGGCTGCTCGTTTCAACAAGCC
CGACAGTGAAATCGTTGACCACTACACGTAATACTCTGACCTTGTTGTCTTCCGTTTAGT
TTGAGTTGTGCAGTGCGTTAACCTGTTATGCGTATTTGGTATAGGTACTGTATTGTCGGA
GATGGGTGCAACATGGAGGGTATCTTGACTGAAGCTTGCTCATTGGCTGGGCATTGGGGT
CTTGGCAAGCTTATTGTCTTCTATGACGACAACCACATCTCCATTGACGGAGACACAGAG
ATTGCGTTTACAGAGGATGTGAGTGGCCGCTTTGAGGCTCTTGGGTGGCACACACTCTGG
GTTAAGAACGGCAACGATGGTTACGACGAGATCCGTAAAGCCATCCAGGAAGCAAAGTCA
GTTACCGACAAGCCTACAATGATCAAGGTTACTTTCTTTTATTATCTGATAATCATCTCT
ATTTTGTTGTTATTGTACAGTTCATCGTATTTACCCAGGATTTTGCTCTTTTTAGGTGAC
CACCACAATCGGTTTTGGATCTCCCAACAAGGCCAACTCATACGCTGTGCACGGAGCTGC
ATTGGGCACCAGCGAGGTCGAAGCGACCAGGGCAAACCTCGGATGGCCATATGAGCCATT
CTTTGTGCCTGAGGATGTCAAGAGGTTTGTTTATTGTGTATCTTGGTTATCTGAATGAGG
ATGGTGAACCTGCTTAGTGTCCACCTTATCATTTCTTTTTTGCCTGAACTGTTGTGCAGC
CACTGGAGCCGCCATATCCCCCAAGGTGCCGCGCTTGAGGCTGACTGGGATGCTAAGTTT
GCACAGTATGAGCAGAAGTACCCAGAAGATGCCGCGACCTTGAAAAGTATTATCACCGGA
GAGTTGCCTGCTGGCTGGGCTGATGCTCTTCCTGTAAGTGGTTTGCCATATTTACTTGTG
TTACTCTAGCTGATATGTAAACAATGGGATCGCTAATGGTAGATTGTTTTGATTTGTCCA
GCAATACACTACAGAGAGCCCAGCGGATGCCACCAGGAATCTCTCCCAGCAATGCTTGAA
TGCACTTGCTAAAGTTGTGCCTGGTCTTATTGGAGGCAGTGCTGATCTTGCGTCCTCCAA
CATGACATTGCTTAAGATGTTTGGCGACTTCCAGAAGGATACCCCTGAGGAGCGCAATGT
CCGCTTTGGAGTCAGGGAGCACGGCATGGGCGCCATCTGCAACGGCATTGCACTGCACAC
ACCAGGGCTCATTCCATACTGTGCAACTTTCTTTGTTTTCACTGACTACATGAGAGGTGC
CATGAGGATCTCAGCCTTGTCTGAAGCTGGAGTTATCTATGTCATGACCCATGACTCCAT
TGGTCTGGGTGAAGATGGTCCGACCCATCAACCCATTGAGCACTTGGTGAGCTTCCGCGC
AATGCCTAACATGCTGATGTTCCGTCCTGCTGATGGCAAGGAGACTGCTGGGGCATACAA
GGTGGCGGTCCTCAACAGGAAGAGGCCATCCATTCTGGCTCTCTCAAGGCAAAAGCTTCC
TCATCTGCCTGGTACCTCAATTGAGGGTGTTGCGAAGGGTGGATACACCATCTCCGACAA
CTCGAGTGGAAACAAGCCTGACTACATCATAATGAGCACTGGTTCTGAAGTAGAGATTGC
TGTGAAGGCTGCCGAAGAGTTGACGAAGGAGGGGAAGACCGTCCGCGTTGTGTCATTTGT
CTGCTGGGAGCTTTTTGACGAGCAGTCCGATGAATACAAGGAGAGCGTGCTCCCTGAGGC
TGTCACCGCAAGGATCAGCATTGAAGCTGGCTCTACCCTCGGATGGCAAAAGTACGTCGG
GTCCAAGGGCAAGACCATCGGCATCGACAAGTTCGGCGCCAGCGCTCCTGCCCCCAAGAT
CTACAAGGAGTACGGCATCACTGCAGAGAACGTCATCGCCGCAGCCAAGAGCCTGTAAGA
CCAGCACACTCGTTCAGGTTCTGTCATCATTGGTGCCAGAGAACTACACCACACTTGTGA
AGGTCTCGTGCCCAGAAAGCTTGGAATAACGGAGGGAGAGGAGGATGCCTGCGTCGGAGC
GTGAGTGGTATTTCTAGGCCTGTAATAAACAATGCCTTTTCCATTTGCGTTGTCTTACAT
TCGATACATATCGCCCCCCTTAGATGATTCGTGGAGGGGGTGAGCCTGATCAAATTGGGG
ACTGGTTTTTGTTTATTGTTCTACATTGAACTGATACTCGTGCTTGCGATGTTTTCTTTC
CTTTCTTCCCCCGTGATCATCATCTCCATGGGTTCTGCGCCCTTGTAGTTTGCTGTTTGC
TCCTCTTCCCCTTACTCCCATACAGACGGCTATGATGCCTAGTATCATCAGTCAGTTCAA
TAAAAATAGAGTGTTTGCCATCAGATTGTTGTGTTCCTTCTAACTTGTCTATACCGATTT
ATTTTCTGAACTGCCATATGAAATATTCGTGAAGTGCCTTGTTCTCGAATCCTTCTTACA
AGATGTCATACGAAATATTCTTGAACCGTTCTTACAAGATGCCATATGCAATGTGAAATG
TGGCTGTAGCCCAGCTTGTCATATGAAGCATCTTACAAAGTGGTGATGGCATCTGGTAGC
AATCCCCTTGTGGAAGTGTTGTTCCATACGGTTGGTTGGTGCGTCCTCTTGCCTGATCCC
TACAGCAGCTGGTTGGTTGCACCCCATCACCCAACGTATGTGGAAGGCATGAAGCTGATC
TTTCCACCCCTTCCTGTGGCTGGCTCCCCTGCGCCATCTACTGTTGAAGGCCGAGGGCCA
CCCGGTACGGCTAAGCAGTGTTAAGAACTTCCACAAACGCTTGTGGCTGGAGGAACGGGA
GCAAGATAGGCTATCCATATCTTCATCCTCTTCCATGCGCTACCAGCCTCAAGTCCTGAT
GTGGGTGTCCCAGGTCGGAAAGTGACTCGAGAAATCGACGCGAAGACCGTACTCGCTTCC
CGCCGCTGCTGGACAGCAAAGGTCTCTTCTCGCCCGGAGAAGTTACCGAGTGTAAGCGAG
GGGCGAGACGAAGGGAAAAGCTTGATGGTGTCACGAGATTCTCCAACCGTGAAGTAATTC
CCGGTGCCTTCCAAGCCTAGTATGCAACGGATTGCTGTAGAATAACCCAACACCATCCCC
GTTGCGTTTCATGCCTATGGAACTGAATATATATATAGATACGGCATTCTGCTTTGAACC
CTTTGTATGTAAGGACAATCACCTTTCGCCGCTGCTAGGATTTGGAAATGAGAGGCACGG
GAGAGGCTGGTATTTATCGGTTGAGAACCGGTGACATGAAGGTGCCTCGCTGGCCCACCG
CATTGCATGGCTTGTGTACTCTTCTCTTATCAATATTGATTTGTATCTTCACCTTTATGT
GCAGTAAAAGCTATATATACTTTTGGTGTCGTAGGATCGGTTGCATGCCTCCCAAAAATA
AACGTGCATATTGCATATAATGGACATAAGATGGGTAGCCAGATAGTGTACTATAAGTCT
AGAACCTAAAGCCACCAAGCCAGTGAACTGTATCATGTTATGTTTAATTGGTGGAAGGAG
TCGGTGTTATGATGTACATCCATTTCTCCTTCCAAGTCCTTGTTTCAGTTTGGATGGCTG
TCTTATTAAAAGCAAACCACTCTTCTAGTTAAACATGTTGGAACGTGCACAAAACACACC
CAATATTTTCCTCAACAGAAGAAAATGCTCACATGATCGTACCCGAATTTGGAAATGCGT
TTCTGTTTTGGAAAAAGACTAAAAAGAGGTAATTAAGGGTCAGTTCTTTTCGTAGCTTCT
AGAATAAGCTGAAATAAGCTGCCCCCTACCCAGCTTATCCTAAAAGCCCAATCAAATATA
TTCTTTTAAAAACCTATTAATTAAGTCTTGATTACTAGGCTTCTAGAAAAATATTTTTAG
TTGGGCTTCTAG