Map Locations of contig_158807 (10054 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_158807

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20110 1 2444 bp MLOC_20110.1 Available Available LOC_Os03g14170.1, FRAME:+3, EVALUE:0.0, 13103.m01659 protein 3-ketoacyl-CoA synthase, putative, expressed





CDS Structure of MLOC_20110






Contig Sequence (10054 bp)

>contig_158807 10054 assembly3_WGSMorex_rbca.fasta
ACATTAAAGACATACGTTCCCGGTAATGTAGGCATTTATTCGCCACTACTCCACCCCTGT
CCACCGGACCGTTGTGAAGGGCAGCGCACTCTATATAAGCCGCCCGTCTCCACTGGTGCA
GGGGTTGGCATTTTACTGTAAACCTATATTCCACTCGACACTAAGNNNNNNNNNNNNNNN
NNNNNNNGGGCTTTTACCTCCACCTTAGAGGGGTCTAAACTCATACAACCTCGCCGTAGC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGACTTATACCCACGACA
ATTAGTAATTGAACCAACATTATCAGTTCCTCTTTACGATTCTATCAACTCAATCATGAT
GTTTTCACAAAAGAGATCTCTGTGATTAAACAAATAAATACTAATTGAGCCAACATAAGT
CCACAAAATTAATGGTTACTAGCTCCTCAACTATGTTTTCCAAGTATCACGTTCAACTCA
GAAATATGAGAAAGCCTCATAATGCCTTATCCCTAAATAGTGTCCAATCGATTAGTATTG
CCATGTTTCTACAATATAGAAAGCAATATTAGTTCATGAACTTTTACCAATTTCTATTGA
AAATCTCTATTTACCTTCTCGAGTGTGATGATCCGCGATATGCCATGGGTGGTGGCCCGT
CGGCAAGCGTACCCCACCCTTGTTGGGCGATCATACGAGGACCAGGCGTAGGCATGCAGC
TTGGTGCATGTAGACTCAAAGGCGATTAGGGTTAGCTTTGTGCATGTGCCGCCACTTTCG
TTTGGGTCGACCGTGAAGATGTCAAATTGTCGATCAACCGTGGTCGTTTTAGTGATTCTT
GTGCTCAATCCATCCGTGCTGTGTGGATGTACTAGCACCCTACACTACTATTTGGGCTAG
GCCTAATCGTTTTCTCTGAAGTCATTCTTAGGATTTTGATATATTTTCCCCATTTTTTCT
ATTTTTTTGCGGGCCTCCTCTGCTTTTCCGAAGAAATCCAACATTCTTGATAAATGTTTT
TTATTTTTTGGCAAGATTTCTAAAAGAATAGACCATTTGGGGGAAATGCCTTTCAACAAT
TTTGTAAGTTCAAAGAGCTAGGTGTTAATTTTCCTTTTTTAAAACAGGTCTATTGAGGAA
ATACCTATTTGTCGTCCACGGGACAAAATGTTGGACAATCGCCCATGTAGTGATTTAGGT
TTTTCTTTTGCTTCACTATTTTTTCTATGGTTTTCACGTTTCCTATTTCTTTCATTTTCT
CGGTTTTACTTCCATCAACATTGTGTTTCGTCGACTCTAGGTTTTTTTTTTCTCTTCACT
TTTCAATTGCCTTTTTTATTTTGTTTGTTATTTTGCCCTTTTGTCATTTCCAAATGCAAC
TATATATATTATTGTGTGTACAAGAACCATTTGCAGTGACCATCTTTAATACACGACGAA
CATTTTCTAATCATGGTGAACAATGTTTCCTTTAAGTTTCCCGTAATTTAAGAAAAACTT
CACTGATTTTAAAAGATTGTTCCTGCTTTTCTAAAGATGTTTAGAACTATCAAAATGCTT
AATGGATTTTGAAAAACATTCATGATTTAGATAATGATTAGTAATTTAAAATTGTTGGGT
CCAACTTCAGGTTGAGCGATGTGTGTATGACTTCCTTATTTCTCATGTGTCGGTTCTATA
CACAAATTATACATGCCACTTGTTGCACACAATAATAGTGTGTCACGCGCCCACAACTCC
ACTACAGGGCCAACGCAGTATGGCAGTCCGGGCAGGTTATTTCGCGGATTACTTGTATTT
TGACAGATTTTCTTTCTTGTGTTTTTTCGGTTTTTTCTATTTCCTTTTTCTTCTCTGGCT
TTAACTTTTTGTTTTAGCTTAACTTCTCTTTTTTGTTTATGTTTATTTTACTTTTTATTC
TCCACATTAAAAAAACAATTTGTTCATATTTTCTAGTTAATATATTGTTTTTCGTACATT
ACACATATTTTTGGAAAAGTATGTGTGAAAATTTTAAAAAACGTACATTTTATAAAAATC
ATGAAGATTTTTAATCAAATAGATTTTTTTATGTAAAATGCATGAATACTTTTAAATTGT
ATGAACATTTTTTGGAATAAGTAAACACATTTTGAAAATATCTGAATACTTTTCAAACTA
TATGAACATCTTTTTTAAAATCTTGAACATCATGAGAACTTCCTGTCTGAAACTTCCATA
AACTACATAAATATTACACAAAGGCTTTTTTTAATATGTGAACACCTTTTAGAATATCAT
GAACATTTTGTAAAATACCTTTTAAAACTACAGAAGTATATATTATCTTCTAAAGTAAAA
TTGAAAAGAAGTAATAAAAATGAAAAGAGGAGAAAGATAGAAGGAAACGAAACTTAGCCA
ACTTGTGATAATGTGTGTTATTGGACGCTGTAAGCATCCTATAATACCCGTGGTGCTGAT
ACATTGTGCCTTGTTGAGGACACGGTCAATCGCCTATGTGTTTGGCGAGTGCGTGCATTT
CTCTTAAAACATGTACTTTTTTCATCACGGTTTAAAAGGCACGGTTTCGTTTTTATGCAT
TTTCAGAATAAAAGAGGATTAAGGCGCGTGCCATTTAATGCTTGATTAATTAGAAGTATT
AGTAGGTTGCATTCACTTCTCGTTTAGTGGTTGTGTGAGTTACTGTGCATTATCTTTTCA
AATAGCTAGACGTCGTGCGGTTATTGGATGAGCACTTGCAAAAAAAATAAAATTAAAGTC
AATCAAGATTCACCTTGGTCTGAGAGATTGCTCATGCGCGTCTTCTAAACCATGACGGAA
AGAGTATCATATGTAACTAACGCACCGCCTTCCCTCGTATCCAAAATTCACGTCCATCGA
AAGCTAGAGATGACACTGCAAAAAAAGAAAGACACAACTTGACCCCGCAACTAGGAATGT
AAATGGCGTGATAGTCCATTTTCTAAAACCTTTCTTCAATTGTTAGGCCGGCAAATGTGC
TTAGGCTGGTTGTAATGTGGAGTATCATATACTTGTAATGCATAGTCTCATATAATAAAA
TATTTATTATCATGCATGACACATAGTAGTAGCACAACATTTAATATGACACATAGAAGT
ATCACGTTCAACCATCTCTTTCATCATTTAGTTTTATGACACCTCATCAAAATTGCCTAG
TTTACATACATGATACTACTATGATACTTTCACTACGACCAACCTTAAACAACGCGTCAT
TTAAATTATGACCTGCAAACTAGCATCCAACAAGGGAAAGGTTTCTACCCGGCACGCCGG
CCGAACCGTTGCGCCGGACGCACACGGGACACGGGATCGTGTTCCATCACGCGGTAGCAC
GCTTTGCAGCCTTCCCCACATGTCCCCAGCTTCCCTTGACCCACCAACCCCGCCTTTCCC
CTCTTCTACCTCGCATACACCGGTGTTGCAACCAGCAAGCAGCACGGCGAGGGGCGACTA
GCAGTGACGGCGAGGGGCGACGACGAGCAATGTCGAGCGATGACGATGAGCGGTGACGAC
GTGGGATCCCGACAGTGCTTCAAGCTCTCCGACGTCAGCATGGGGGCGATCCCCTTTCTT
GTTTCTCCTCCGGCGAACAAGCTGCCGCCTCCCACGCCACCTTCTCAACAAATCCCCTGC
TCCGCCGCATCGGGATGCCATCCAGTGTTGGAGACAAAAGGCTATGACAGAGACGACGAT
GTTGCAACTTGTGATCAAAAATTCTACAACCGGCATTGTCGAAAGCTTCAACCAGAGACG
ACAGGAATCGAAGGCCACCCACCACGCAGACCACGGGAAGCTGCAACCGGTGATAAAAAA
AAGCTTCAACCAGCTTGAAAAAAGCTTCAACCGATGACAGCGGAACACAAAAAACTGCAA
TCGTTGACACAAAAGCTTCAACCAAAGACCGACGAAAAAAAAGGCTGTCATTTTTGTTAC
AACCAGCAAACGAAAATAGCTTCAACCGTCATGAAAAAAGCTTCAAGCGACATGGAAGAA
GTTTCAACCAAAGTGAAAAAAGCTTCAACCGGAGGACAAGCATGTGCACGCATGAGCGTT
AACGATGACGAGAGGCGAGCGACGAGGGAGGGGGGATAGGGCATGAAGGTGCTGCGGTAA
GCAGTGACGACGGGGAGGAAAGGATGGGATGATCGTACGGCAGGAGGTCGGAGGCGCGTG
GACCTGTGCGCCGACGCAGAATGGACGGGATGCCAGACCTGACAACTATTGAAATTGAGA
TCGAACGGCTGCTGCCTGACCGATGAAAGCGTTCGCGCCGGCAGAGCGGTGTCCATCCAA
CATTGATACGGCCAAACATAATTGAACCTCCGTAAATAAAGAACGAAGCGGTAAAGCGCG
CGACACCTTAAGAGGAAGGGACAGGACAGAGGAACGCAAACCTTTAGTTTGCAATTGGTC
GTGCCGGTCTCGGTCTGACTGATCCATCCAACCACCAATATACCTGTATGTCGATGCAAA
ACGTTTTCGGTACTTTATGTACCGGAATAGACCCGCTGGGCGAAGAAGGAACGCATGTGG
CCATCGGTAGCGCTTGGAAGAACCTGTCACGCAGCTCGCTCAACCAACGCGAGCTTCGCA
ACACATGCGGATGTGGTTCCTTTCTTGAATTAAAAAGGAGAAAGCTAGGTCAACCAAATG
AATTGATGAACGTGATCGGACGAGCGGGCATGGAGGCAGCAAGCGCGTCCGCGTGTGTCG
TGCCCGGCAGGCTCGAGGCTGCCGCTGCCTGCCCATGTACTACTGTAGGAGTAGTAGTAC
TAGAGTGCTGCTGTACGCGTCGTCTACCTGTGGCTGCCTCCTTAATTCCAAGTGGTTGAG
CGCCCCGGGTAACCACCGCCATTAATAGGCCACCCTCCCTACCTGTCTACTATCCATCCC
TCTCTCTTTCTTTCTCCGGTTCGCTTACTGCCACCCCCGTGCGGGTCCCACCCCCTGACG
CCTCTCCTCCTCCTCCGGGTCAATCCATGACTCCACGAGCAACGCGAGACGTCGATCGTA
GCAGTAGTTACACTTTTGGATTGGATTGGATTGGATTGTAGACGCGGTCGATACGTACAG
CTCCGTCGTTACTACTACGTGGAGTTGTACTGGTATACCATGTTTGCGTACAGGTAGTTT
TCAGAGAAAGAAAAGAAAGAGCCTCGCGGTTTGGGCGCCTATAAGTTTGACTGCCCCGGC
ACCGGCAACGGCACCGGCAGCTGCACAGGCCACAGGTTTGTTCCGGGAGCCACCGTCGCG
GTCTGGCTGTACGCGCACCCTATATATATCGAACCGCCCGCCGAGGCCAACTCACGCTTC
CGGTTCCGGCGCCTCGGTCCAACTCACACCAAAGGCGACACTCGACGCGAGTACGTCTAC
GTCTACGTACGACTCGAGATCCATGGAGTCTGCGCCGGCGGCGGCGTTCATGGAGCGGGA
GCGCCTCACGGCGGAGGTGACCTTCTCCGGGGACGCGCAGGCTGCGGCGTCCACTGAGGG
GCTGCCCAGCATCATCATCAAGATCCGGCGTCGCCTCCCGGACTTCGCACGCTCCGTCAA
CCTCAAGTACGTCAAGCTCGGGATCCGGCACGGCGGCAGCCTCACGTCCTACCTGCCCAT
GCTCTGCGTGCCGGTGCTCGCCGCGGCGGCATACTCCTTCGTCCGCCTCGACGTCATCTA
CCTCTCCATCGACCTGCTCAGCTGCGTCGCCTGGCTCGGCACCGCCATGCTGCTCCTCAC
CGTCTACTACATGAAGCGGCCTCGCCCGGTGTACCTCGTCGAGTTCGCGTGCTACAAGCC
GGAGGACCAGAACAAGATCTCCAAGGAGGCCTTCCTCGACATGACCGAGAGCACCGGCTG
CTTCAACGACGAGACGCTCGCGTTCCAGACCAAGATCACCACCCGCTCCGCTCTCGGCGA
CGAGACCTACCTGCCCTCGGGCGTCCAGGCGCGCCCGCCGAGGCTCAACATGGCCGAGGC
GCGGCTGGAGGCCGAGGCTGTCATGTTCGGCTGCCTTGACGCTCTGTTCGCGTCCACCGG
GATCGACCCGCGCCGCGACGTGCGCATCCTCATCGTCAACTGCAGCCTGTTCAACCCGAC
GCCGTCGCTGGCGTCCATGATCATCCACCATTACAAGATGCGGGAGGACGTCAAGTCGTT
CAACCTGGGCGGCATGGGGTGCAGCGCCGGCCTCATCGCCATCGACCTCGCCAAGGACAT
GCTCCAGGCCAACCCCAACTCGTACGCGGTCGTGCTCAGCACCGAGAACATCACCCTCAA
CTGGTACTTTGGGAACGACCGCTCCATGCTGCTCTCCAACTGCATCTTCCGCATGGGCGG
CGCCGCGGCCCTGCTCTCGAACCGGCGCGCCGACGCCGGGCGCGCCAAGTACCGCCTCCT
CCACACGGTGCGGACGCACAAGGGCGCCACGGACGAGTGCTTCAACTGCGTGTACCAGCG
CGAGGACGATGTGGGCAAGGTGGGCGTGTCGCTGGCGCGGGAGCTCATGACGGTGGCCGG
CGACGCGCTCAAGACCAACATCACCACGCTGGGGCCACTGGTGCTGCCCCTCAGCGAGCA
GCTCAAGTTCCTCAAGTCGCTCATGATGCGCCGCGTGTTCCGCGCCAAGGGGGTGCGCCC
CTACATCCCCAACTTCCGGCGCGCGTTCGAGCACTTCTGCGTGCACGCCGGCGGGCGCGC
CGTGCTGGAGGAGGTGCAGCGCAGCCTGAGCCTGGAGGACAAGGACATGGAGCCCAGCAG
GTGCGCCCTGCACCGCTTCGGCAACACCAGCAGCAGCTCGCTCTGGTACGAGCTCGCCTA
TGCCGAGGCCAAGGGCCGGGTGAAGCGCGGCAACCGCGTCTGGCAGATCGGCTTCGGGTC
GGGCTTCAAGTGCAACAGCGCCGTGTGGCGCGCGCTCCGCGACGTGCCGCCCGTGTCGCC
CCCGCACGCCGGCGCCGCTGCGCCTGGACCGGAGAAGAAGGCGGCCTGCAACCCGTGGGT
GGACTGCGTCGCCAAGTACCCGCCCAAGGCGTACGTCTGATGATCATTACGCCGCCGCCG
CTGCTGCTGCATAACTCCACACGAAGATTACATGATTCTTTTCTCCCCACCGCAGTGTAA
AACATCACAAGTGCGGTGGGGAGATTATATACTCCTACTATACTTTTTCTGTATTTCCTT
TCCCGTAGGGTGGCTGTAATTCAGGTTCCATGGGCGAGCAGTGCCGTTGTTTTCAGCTTT
TCTACTTCAAGTGTGAATTACTATAAACGACAATACTCCTCCTTATATATATACGACGAG
GTTTCATTCAAGTTATGAATATGATTGTATGATCTGCATTAGATTGCTGCTCCGGCACAC
GTACGGGTCCCGTTTCGTTTGGTAACGTATGGATTGAGTTCGCGGTCTCATCACGTGAGC
CTTCCAAAAACATTGGTGTCATGTTTCTCTTCTGGTCGCCTAACGGCCTGGATGCCTCGG
CGCTCGGTTCCGTTTCTTCCTTAATCTGAACGAGCTGACCACGCCTGCCGCGTGTTCGGC
TTCTGGCCCAACCCAGCAAGACTCTCGACATGCTCATTGGTGTAACGTGTAAGTATATGA
AGAGCGATATACTTGTGTACTATTCCCTTCGTTTCTAAATATAAGTCATTTTTAGAGCAT
AGATTCACTCATTTTATTTCATATATAGTCACCTAATTAAATCTTTATTAATACTTATAT
TCAGAAACGGATGAAGTATATGTTTGAGCAGGAGCGCGACCCGTGGAAAATATCCAGTTC
AGGGCATGCTTGATTAATGTTGGTGTGGTGGTTCGGTGTTGGATTGACTTACCAATCCAT
GTAGTTACAGGTCGTTCATCAGCAAATTAATGGCGGCATCCATCGGTCTATTTTGCATGG
CCATCGCACAACGCTCGACTTTCTGCGTTCATAGTTGTATGCATGTATACAACGGTCGAA
AACTCGCAAGCGTACTGTATACTCCTACTCGTGCTACTACTACATTTTGTCCCTTCACAA
ATTATTCATATCCAACATAATTTATCTCAATATTTACAAAAGAGGATACAAATGAGATAA
ATTGGAAACGGTAGCCTGACTTGTACATGTTTCTTTTTTGTGAAAACACTATTCTTTTAC
GTGGGATGTTTACGCGTGGCAAATCTGATGGTTTTCATGACAAATAAAATAAATTTAGGT
GTATTTGTCATGCTCGCCAACTAAACATGCCATCATCGAAGAATATAATTCGCAATGAAG
AACATTCGATTTTCATGGTAAAAATTCTGACGTCAGATTTGTAGTGAGGTCTATTTTTTT
AGAGAAAAGTCTGGTTTCTCTATGGTACTTGCACACGTCCATAACGTACAAAGGAAGCAT
TCGCGCATCGCCCTGGTTTGAATGTGACGATCCAAACAGAACAGTTGTAGGCTGGTACAC
TCGGTTAGGTGGTGTCTTTTCCATTTAAACCAAGCAGCTAAGCAAATACAGTGCTCCTTG
ACAGCTTCGCGTCACCAATCGGCCATAAAACCCATGCTACTTAACAGCATTTAAGACGAT
GGCTAAGGAACAGAGAAATGACACTCAAGACAAGCTAATCTTCAAAGGGATACCGTGACA
AGAAAAGGGCAGAAAATTTCGAAGCGGCCAGGCAAGAGCCGCGAGAAAGTGACCAAACAA
CTCTCAACCCCCAACCATCTACTTTAGGACTCAATATGAACGCACGAGAACGTTGGATAA
TCAAAAAATGGCCGGGGCCAACCCAAACCGGGAGTCCAACCATTCAATTCTGACCGCGCC
GCGGCACCAGATGGGCTGCCGCCTGGAGACCTCAGAGGACCGCATTGATTGGACGGGCGG
GCACTTTCCTGACGCGCGACCAGTTGAATTCTGACGGTGACGATGAGGTGATGGGCGGCA
GCAGCACACGGCTGCGGACTCGGTACAGGACATGGCACTGCGTACCAGCATACGGTTACC
ATCTAGGGGCCGATCAACGAGTAGGGCGTTTTGAAGCTCGGGCTTCATGACACCCTTTAT
TTTTATTTTAACTAAAATTAATTTTTTTGGTTTCAAAATAATCTGAAAAAATATGCAATA
TATATCAGTGCAAAACTCAGGATTAAATATTTTAAGATGCGATCTGTGCAAAAAGAACAA
ATTCATGAATTTTTAGAATAAATAGTATCATGTGTTAAAAAGTCATAAATTTATCTTTTT
TGCACAGACTTTATTTTAACGTATTTTGTTTTAAAAATTTGCACACCTGTGTATTATGCC
TCCATGTATATTCTTATTTTTATCAGATTTTTTAAATGTAAAAATATGAATTTTGATGAA
CTTTGAGGTTTTCAAAAAGAGGGTGCCATGGAGTCCGAGCTCCAATAGGCATTTTCCCCG
ATCAACGATAATCAAATTGAGCCGTCTGTCGCTCCCCCTGGGCGACCCAGACGCTAATAT
GAGCAACTCCAATGCGTCGAACAAGAGGTACGACGCTTTTATCCTTTTTTATCTGTTTGA
ATCGGCCCGGCGAACATCCGTATCTGTTTTTGCAATTGGATCGGTGTTTGCGTCCAACAC
AGCGAGCGACCCATTTTCTAGGTGGCGCAAAAAAACATAAGAAACATTTTAAACACTGCA
GAAAATATTAATCAAACATTAATGTCGTCCTCGAAGGCAAGTGATAGTCCACATTACATT
AAATGGAAATTTAAATAAACTAAAAACGAGGAGGCGCACTGTCCTAGGCATCCTCCTCCT
CATCGTCGTCGGGGCCGATGTGGTCGATGTCGTCGTTTTCTCATGACAGATGTCATGGGG
TGGCTTATCGAGAGTGGTTGGGGTTGTAAGGACGCCGACGGACTCCGGAAACGGGATTGA
GGACAAGCGGTGCGAGACACAAGATGTACCTAGGTTTGGGGCCCTCCGTGAAAGGTAACA
TCCCTAGTCCTGCTGGTTTAGTTGATGAACCGAGTGAGTTACAATGGTGGTCCTTGAGCT
CTGCGATGGAGAGGTGTAGGATCGAAAGTATGTC