Contig Data
morexGenes
Links



Map Locations of contig_1587881 (4148 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1587881

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20076 6 1326 bp AK367691 Available Available None





CDS Structure of MLOC_20076






Contig Sequence (4148 bp)

>contig_1587881 4148 assembly3_WGSMorex_rbca.fasta
AAGCAGGCCTATATTTCTTGGTTTCAATAGGACTCCGTGTGGTAAGGAAAAACTGGTAAT
CTATTCCTTAAAAAAAAAATCTTGGAGATTATGTAATGCTTACTCTCAAACTTTGAATGA
GGGGTATAGGTATGGATTCCATAGGAATTCGGTAACCACATTCCTATATATGATCTACGG
AGCTTCCATATGGAAAAATCCTTAGGGTTCAAATCCCCCGAAATTCCTACGAAATCCTTC
AAAACAAAGAGGCCCTAAAAAGGAAACTGAAAGTAAAAAAAAGCAGAGGCAGTGGCCATG
GCCTTTTTTTTAAGGAGTTGTGCTCTGTGTTGGCCACCAACAGATAAGTATGCTATGAAA
TTTATGTATTTCTTTGTCCGCTGAAAGTCTACAATAGAAGGATGCACTTTCTTAGAAGTA
TCTATAACGAGAGCTTTTCTACCGGGGGCAAAAATCCCTCTAATATTCCAGAAGATACTA
TTCATGTTAACATTTTTTCCTGGGATGCTTGTCCGCCTCTGATTACAGACCCTGTACCAA
AGGTCCTCGGTAATAAGCAAATCATCAGCCTAATCATGAAACTGAGACTCATCGTTAGCA
CTAATAAACTTGTTATTTACATGACTAGTGGGAGACAGGAGATCATCAGTCATATCTCCA
GGCTCAAAGGTTCTAAACTGTTATCTACAGGAGTTAAATCAACTAGAGAGTGTTCAGCTA
GAACATCAGAAATATCTACTCCTACAGTGTGAGTAACAAAATGAAATGAAATTTATCATT
ATGCAGTAAAGAGGTAGTTATGGTTGGTAACTGCAGGCTTAGAGATCTCAAGATTTTTCA
CCTTCTTGTTCTCTTGGGCCAGCTCTATCATGGTCTTCCCCTTGCAGTCAAATCTTGTGC
TCTGCCTAGTAGCTTGGACAGGGCCCCACTTCTTCTCTTTCAAAGCTGGTGGCATCTGAG
GAGCCTCTGGGATAACTTCTTCTGGCTGCTCATCTTGCTGGTCTTCACCCCATAGGTTCT
TCTATATCTAACAGAATTATCCAGATTTTCGTCAGAGCGGACAGCTACAATCATAGGTTA
GTTGAGTACATAGCTAGATAATATTTGCCAATATCCAAATCAGGAGCTCAAATGTCGAAT
TGATATGCCATGTTACCACCATGTCCAGATTCGACATGTTTGAAACTTGGTTGACCAAAT
AACCAAATGTTGCAACAATTTGAGGTTTATTTCGTATATTATTAATCATGAATACACACA
TAGATGGCAAAAAGAAATTGAATAACTGGACATTATTTTCGCTCGTGCGACGTGACCACA
AAGATACGCCAAGATCCACTCTGGAATAGTTTCTTCTTGCCCATAAAAGCTAAACCTACA
CTACACTTCTCAGTCCAAACTCCGAAGCCGAGTGCCGTAAAATTCCTCGGAGCAGCATCA
TGCTTGTAGGGAACACGAACAACTGCAGGTGTTCTACTCCCTGTAAGCGATGAACTTCGC
AATGTCGTGGATCCCAGCCTCTCTGTAGCAATCGGCGATCCGATCCACGACTTCGTCCCA
GTTGCCGTCAACTGTTGCTAGATCCATAAGAAACGCCGCCTCGTCAAGGACCACCTGCAT
GTTTGAGAAGCTCATGTGACAAGGTGCAGGGAAGCAACTGGGCGTCGATGATGGAATGGT
AGACGGTTTGTAGTTACAGACCTGCTCTGGTGCTTTTCCTTTCTTCAGATCGTCTTGTTT
GCCCTCCTCGGATACCTTCTCTCTTATGAACTCGATCTGCTCATCCTCCCACCCAGCTAA
TTCAGCTGCCTCCTGTTACACAGGAATGATGAAAATGAACAAAAATGGGTCAAAGGTCGC
TCGGCTGAGGCATAGAAGCAAGGAAGTGAAGGGGAGGAGGTAACAGGGGGAAACCATACT
TCATATCTACAGCCCAGTGTCCACCATGGTGACTTCAGAGCCACTCGAGCTGACTCTTTG
GCCTCAGATGTACGTCCAACTCTGAAAACAAAACCACACAAGAAGCAAAATTAGGAACCC
CGACGATTCACATGTACACCACAGATTTTATTCAGACAATTATATAGATGGAATGTTATC
CGATTTACAGCACGTATGCCAGCTCAGTTGACGAACATTAGCACGTTATTACTGTGTTAT
TTATTCGCAACGTTAGTGTCGTGCTGCTAGTCCACAACACTTGGAGAACTACTTAGATCA
CTGTTCTTTTAGGAATTTTACACAAGAACTAGATAATTCTCAATTCAAAACTCAGTTGAA
AGTATTAGCAATCTTATATCAATAGATATTTTGCTACAAATGAATTCTAGCCGGTCCAAT
ACAGCACAACTGAAGATGCAGCCAAGCAGCAAGATGTCAAAGAATTGCTCGACTCATAGT
TTGCTAGGGATCACCATTCACCAGCGCACACTATGCTCATGCAAAGTGTAACTACACAGT
GAGTGTCTATTGATAGAACATCAGTCACCCACCTATACAGCTAATTACACATCAGTACCT
TTTCTGAACTTCTGAGTTGAACACAAAGGGTCTTCCAAATCCAGGAAATTGATCTCTCGT
ATAGAATTCTCCAGTAATAAGAGCGGAAACCTGAAGGGCAAACACAATGTACAATTTAAA
TCTCGTTGGATAAACATTACTAATATATATCGGGAGAAGGAAAGAGTTTTACATGATCTC
CTTTTTCTAGGTGGCGTGATGCTTTCCTTTCTAGAATATCCGGAAAGAGTCCAACCTACA
GCAAGATATCAGTAAAGACACTTGTCCTCAAACTCAGTAGTTACAAACTGAGGTGTATTT
CTCAACCTTCTTCAACAAATAGACATCAAGATCTGCCATCTGCGATTCTTTGAAATCACC
TCTTTTGTAAATGTTTGCACCAGCTTCCCCTACAGCAGACCATAAATCTTCTCGAACAGC
AGACCATAAATCATCACCACTATCAGCCCTGCTATCAGCCTCGACAAGTATTCTATGAAT
ATATTGGTTGACCTGATAAATACGAGTAGAAATTGTAAACAAAAATGGATTGCATGTGCA
CATGTTGTAAATTAAAACATTATAAACACATAGCAATATAGACTTACGTTTTTAGCCAAA
AGCCATAGCCCATGGTTACGCACTTCCACTACAGGCATCTCCATCCTGAAGGACAAGCAG
ATGTATACATATGCCTACTATTTAAATACTAGTCCCAAATGTGAAAACAATAAAAATATA
TAACAGTATATGCAGGGGCAACTAACCCACTTGGAGCAGTTGGCCATCTCAGTAGGGATG
TCAAGTTACCTGCATTCTGACTAATATCGTCAGGCCTTTGAGCTTACAATCATGATGTTC
GTAATCACTTTCAGGTGAATAATTCAGTGTAGAACACATCCAAACCTTGCGGGCTTTCTG
ACAGGGGAACAACAAGTGGAATGAGCCCTCTCTTAGCTCCAGGAGAAACTATCTTTTCAC
CTGCCAAGTTCCAAATGTATTTTGAACAACAAGGTCGAGAGAGCCCAGGAGCTATAATAT
TAGCAGTATACTTTCTCTACCCGGTGGTATTCTAAGTTTCTGATCAGGAACCACCTTATG
CAGGACTGAAATCGAAAGTTATACAACTAGATTAACAAAGAAAATGAGAAGGCAGTTGTT
GTCGCTGCTGAAACTGAATCAGTAAGCCTTACGCCCATAACAGATGATTTCGAATAGCAT
GACAAAGGGTTTGTTGCCATGAATGAAGAATCCATGGAAATGAAAAATGTTACTGAGATA
ATGTGATGTAGTACCTCGTGCCTGAAGCACATTCAACAAAGAGTTAAGATGCTCCGGGGG
ATCGGTGACAGCGATTTCCTTGACGAACGACACATGATCTGCAAGTTCCAGCAGGAGAGC
CATCAGAAACCTTGTGGTAGCAAAAGGAAAAGTGCAGAACGACTAAGTGGATAATGCACA
CGGCGTAGCAGCATACTATATAGGAACGAATGTGGTGCATTAAGCTACTGCTTCAGTGGA
TTCTGCTCAAACAGCCTAAAAGTTTACAGCACCGTGGATTCAGCCGGCTCCCCAAATCCA
ATAACCCATCAATTAATAATCATCTACACTTGGTCTTTGTCAGCGCCATCTGGGTCACGA
ACTAAGTC