| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_1587796
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_20061 |
2 |
493 bp |
MLOC_20061.2 |
Available |
Available |
LOC_Os03g20380.8, FRAME:+1, EVALUE:4e-24, 13103.m12974 protein CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
CDS Structure of MLOC_20061
Contig Sequence (2592 bp)
>contig_1587796 2592 assembly3_WGSMorex_rbca.fasta
ATGCGGGCCCGGTACGTCAGATACATGTGTCAGATCGTATTACAACAATTAGGCTATGAG
ATGGTATTGACACGCATAAAAAAATGACTATTGGTATCGATTCGTTACATGATGTCCAAG
TGTGGTAGTGTCCTGCAATTATCTCCAGCTTACGGTATGTACCGGCCGGGTTTCTATACC
AAGGCAATTTAATTTACTTGCGCTTAATTTATTCGTGTGTGAGATCTCCCGCCAAATATG
TTGCGCGCGTCAGATGGCCGGGGTTTCCCTGTCATGTGGACGTGTCACGCCTCGCCTGCT
CATAAGATCACATTTCCACATCGAAGCAGGCAGGATATTAACTGCCATCGACATTAGCCA
GAGGTCGCGAAACTTCAATCGGTGGTTGTGCCGTCGCTCCTTTTGTTTGCCCCCCTCGTG
TTTCCAGCGGCCGCAACCAAAAACAGTAAGGTGGGGGGGTGCCAGCATCTTAATTCGAAA
TTAGTAGTACGTGGCCATGTACAGTATCAGGCCGTGAAGAAAGTTGTCATGCCAAACACA
GCTCGTGTCTTGTAATTTATCTCTGCACGTAACACATACCGGTGACCAGAAAGCCCACGG
AGAATGGTAGAATATTGTTCCCACGCCAAACAGGTGGGTTTTGTTTTCTCAAACAGCAGG
CCCAAACTGGTGCGGATATACTCCCCTCGTGTAAAAGTATTATATTCCCTACAACGGCAT
ATACTACGTGCAAAGTTGTATATGCATAGTTAAAGATTATCACGATAGCAAAAATGACCA
GTGACCAAGATTATCGTTCAAATCAGCTGGCCATTCCAGTTGGTCCGCTATTAAAACCTC
TTAAGAAAATTATATTTAAAAACGGAAGAAGTATTACAGTTAATTTTGTATACGGGGGCG
AATTCGCAAGGCTTGAAGATTCATATAGCATGTAGCAGTACTAGAGAGTAGAGAAGAGAG
TTGCGCTGCATAGCTCTGATAAGAGCACAACCTTATCCACGTACCCTGGTCTGATTCTGG
TCTCTGGTGCACACAACGTTCTTCATGGAGTATGTTGAAAATACCACTAGTGCTAGCAGG
ATCTTTTTTCTTTTTCGAGTAGAATCGAAAAGCAGCAGTAGAACGAAGGGGACGAAAAGG
ATAGGCCATGCACATGCAGTGCAGTGCAGGTGCAGGTGCAGCCCTTGGGAACTGAAAGAG
GTGGCAAGGCAGCGTCGGCAATCAAACTTACGTACGCCAGCAGCGGCTGCTCTGCTCGCA
TCCATCCCGATCCCATGTCCTTTTCTCGTGGTGGTGCTCCTCCTGCCCAGGCCCAGCTAG
CTATGCGAGTACGTACGTGTCAGTGTCACCCCCCCACCTCCTCCCTCCCTCCCTCCCTCC
TTATTTATCCCTCTTCCTCCTCTGCATCCACAGCAACAGCATCCTCTTCCTCCTCAGACC
AACCCTCGCTAGCTCCTAGCTGCATCTGCTGCCAAGCTCCACCTGCTGTCTGCTACCTCG
TCGGGTTGAAGGTAAGGCCCCTGAATCTGTTCCCTACCGTGCCGGTGTGAGAATTTTGCA
TTTTCTTGTGCTACTCGGGGACCTACATACAGCTCTGATCTGGAATTTCCGGCTCATTAT
CACCACTCATTTCTCTTTCTGCTCTTCATTTGAGCAGCACACACACTTTTTTAAGCTAGG
ATTATCTACCTTGCTCCAGAAAGTACATGTCTGTAAACTGCTTTCTGGAAAACTCCATCT
TAGGTGACTGTGTCGGGTAGGATCATTCATAGGTTACCAACTGGAGATTCTTCCTGTACT
GTGTGACCTCCATGTACTTTTCATGATTTTTTCGCCTTTCGGCCGCAGGCACATGTCCCT
GGTTTAGCTTGGGATGATGCATCTTATTCTCATGGTCTTCGCCACCTTTTTTTTTTGTAG
ATACTCCGTATGTCTTTGCCACCTTTTATATTAGTAAAGTCAAAGTGGGTTGAGTGTTTT
GGACTAGTCTGGTCATTTTATATTGATGAAGATGATCAGGTGTTGTTTAGTGTTCCTGGA
TCCTGAGATCTTTAGGATCTACGCTACTTCTACTGTTTTTCCTTTTATCCCTTTTGGGAA
AAGATGGTAAAGGCTGCCTCATGATAAAATATGGCACAAGCCAAATTCATAGTGTCCAAA
GCCTGATTTGATTGCGCAACTGCAGGTCGTCCAAGAGCATTTTGAAGGTTGACAGTAACC
TTCGGTTGTGGGAAGATGTATCGGGCCAAGAGAGCCGCATTGTCACCAAAGGTGAAGCGC
CGTGTCGGCAAGTATGAGCTCGGCCGCACCATCGGGGAAGGGACATTTGCAAAGGTCAGG
TTCGCAAAGAACACTGAAACTATGGAGCCTGTTGCTATCAAAATCCTCGACAAGGAGAAG
GTTCAGAAGCTCAGATTGGTTGAACAGGTCATTATCACACAGTTTCCTCATATTCCTGTT
ATCTGAACATATCATATACTCCCTCCGTTTCTAAATATAAGTCTTTTAAGACATTTCACT
AGGGGTCTACATACGAAGCAAAATGAATGAATCTATACTTTAAAACATGTCTATATACAC
GTAATAACTTCG
