Contig Data
morexGenes
Links



Map Locations of contig_158774 (4886 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_158774

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20047 2 1118 bp AK251570.1 Available Available None





CDS Structure of MLOC_20047






Contig Sequence (4886 bp)

>contig_158774 4886 assembly3_WGSMorex_rbca.fasta
CATGACTTGGTTTCGAGATCTTATGGGTTTCANNNNNNNNCTACCCCAACTTGTTTGGGA
CCGAAAGGCTTGGTTGTTGTTGTTGTTGTATAATATGAAACTACATTCCATAATGAATCT
ATTGATATTGATTTGGTATTGTGATTGTTGATACCTTTTTCTATAAGTTTGGCCAAATTA
GAGATACTTTGACTTCGGACAAAACTTATATGCAGACTAAAAAGGACCGGAGGGAGTAAC
AAACATCATCTCTAAATGTAGACACATTGCATTCTATATCATGAATGATTGAAGTTTAAA
ATTAACTTAATATATAACCAAAAAAAGGACAAGCATACTGCACCAAGTCACCGACCATGT
TTCTGTTAGTTTTCTATAGAATATCCATAACAGGAACACTTGGCTACTGTTCTTCCACGG
TTTCATATGTAAAATTCGCCGCTTCTTATGAACATCTAAAAAGGCAATTTACGGAAAGAA
TTTTATGTGATTCACAGATCAAACAAGATTACAAGATGTAAACCCATAGAAAATCCTAGA
ATAATCAGCCAATAGCAGAACTGATTCAACTGCGCAAAACAGATAGGGAAATATGAGTTT
CTGTTTTCGCGATCATATCTGAACTACGAGTTAGTAAAAGTAGGTGCAGGCATGCGAAAA
AAATAGGCACCATATACCAGAGTAACAGTAAATGTAATTGGCAGTTTACCTCCATGAGCA
ACACAAAAGAGCACCATAGTAACTTTTCCCACCAAATATTAGTTGTTCTTTCGCAAAGTC
AAATACTCTTAAATAACCTGCATATAATCGAACAACTTGAGTACAATGTATCACTAACAG
GAAACCTTTATTACATGTCAATTCTCGTTCTTGGCTAGACAAAATTACCATCTCGCCCAA
CAGTTGCCATGTAAGCTCCATCCGGGGAAAATGAAATGGCATTGATTGCACCTTGACAGA
CGTGCCATCTTGCTGTAGGATTGCTCTGCAGCATTATTTACATCCCATAATCAATGATAG
CAGCTACAAATTTAAAATTCATCATGTTCAGGAATTCTAGAGTTTCCTTGAGTTAATGTT
TTGCAGCATTAAGAGAACATAGCAAAAAATAGTAATTTACAGGTTCTTAGTACTGGTTCC
AGTATGGTCTGCTGGTAAAGTGCTACTCCCTCCATTCCATAATATAAGACCGCTTTTGAC
ACTACACTAGTATCAAAAACACTCATATATTATGGGACGGAGGGAGTGCTTGAGAACTTG
ACATTTCCTAATATAATAGAAATGAAACCCAAGTGACAGATAAACACCACTGCACTGAGA
ATCCAATGCAGGTTGACGCAGCATAAGCAGTCTGTGCTCTATGTCAACTAGCAAGTGTGA
GGACAGTTCAACCACATGAAGCCTGTGTTGAACATGTCAACTATTAAAGACAGAACACGA
AAATGAGCATGTGGAAAACTAATTTGCTACCATCTTCAACAACTGGGGCATATGATCCGT
AATTCCAGGATACTGGTTTATCTTCACAGTTTATATAAAAATGGAGACTAGTGCACTATG
TATAGTCTTACATATCTACCAAGTTAGCGTCACGTAATTTCAACCATGAGATAGCAAAGA
AAATAAAGATGCTACAACTTAGTTATAGGAAAGTGAATGTGGCGTTCCCCTTTCCTAGAG
GAACTTCTCTAATTATAGGAAAGTAAATGTGGTGTTCCCCTTCCCTAGAGGAACTTTTCT
TGTCATCGAAGAACTCATGTAAAAAGGGAAAACAGTGCCATCCTTGTTTCCAGTACATGT
TGAATTATCATAAACTTCGCCCACACGAATTAAACGAGAGTAATTTGAGGGTTACTGCAT
CGCGTGGGTGGGGCAAGCCACATGACCCCCATAATTTGTTGCAGACATTCTTTTCCGGCA
TGTTATAATATCAAGTTTACATTGTTGCAGATGTTACACAAGATAATGTAGCAATAATGT
CTATTTTTGCAAGCAAAGGCTATTTCAATATTTAGTTTCTGTTGTTGTAAATGTTATCTC
AAGTGCCGCAACAGCTAACTTAAGGTTTTTGCATACATATTATTTTGGAGTGTTTCAATA
AAGCATCAGAAAACGTTGGAATGTTCAAATTTATGCAAGTCCTAGAGATGTTCGATATGA
TATTCCACAAAATGTTTCATGTGCAATAAGAGAAGTTTGAAAAATATCTGCAAGGACGTA
GGCACACTTCTATGTTCAGCATCCCTGACACAGACTTACAACATGCTGAAGCTGAAAATG
TTGCTATTAGTTTTTAGAAATGCTACAATATATTTAAATGACTAATGGGTCGTTCTTCCT
TTTAAGAAATGTTACACGGTGATAAACAACCAGACATCATAAAATTCGATAGTGAACTCA
AGAATGATTATAGAACTGATGTTACAAGCATACACATCATGGATATTGAACCCAACAAAT
TATTGTGTTAGTAGTCCAGCCACTGCATGTAAGGCATCAGTTTTCACGGATGCGCAGGTA
GTAATTATTCCCTTCGAAAAGTTTCCAGACCAAGCACCTCTCTATTAACAAATGTTTAAC
CATGACAGCATAAATAACCATGCCTGTACATTTTTGTAGTAAAGAAAAAAAAATCAAATG
CCATAAAAAATCAAGTGTCCCAAGATACCTTACTGGACTTTGCGTGTGAAATCGCCAGCT
GATTTTGATCCTTTACAGTTGGAAATGCCCAGTCAGCATTTCCATCCTTTGACTGAACAT
AGAACATAACTAGTTCAAATTTGGCATAATGGAGTATGATTACTTTGTAACAAAACTCGA
TGACAGTAGGCACTCACTTTGTCATACACATACAGATTCCCATCAGCATTGCTGACAACA
AAAATGCCTTCACGCTCTGGAACCCATGCAACACAAGTACACCGGCTGCAATAACGGCAT
CTAGTAAAGTCAAAGTTGAACTGATTGCAAATAGTCATTTTTTTCAAACAGTATTTACAT
GTATATACATAGTCCCACAACCTATATGTAAATATTCACTTTACATGCTGACTAGGCAAG
GGATGTATATCAACTCTGCTCTTCGTGCCAGCCCCCCACCCCCGCCACATGCATAAGATG
CTTACACTAAACGATCCTCGCAGACTCCATAGAGCGAGGAACAGGACAACTATTGGACCC
ACCATGGTAGGATGGCATTAAGGGCTATTCAAAACAAGGGAATGTCGACATCTCTCACAT
GTCAATTTGAATCAGGCAGCATGAGAAGTCATACAAAGCACGATACCGGCACAAAGCAAA
ACAAATGTTGCCACTATCTACTGAGCTCCATCAAAATGAGGTGCTCAAATGAAGTTTCCA
ACCCTAGTCCTTACCCATTAATAATAGCAGAAGTTCCCTATAAGTTACAACTTCTAATAA
TGCACAAAAAGGAAACTCTGAGTCAGACCATCTTCCATATAATTATCCTAAGACAGTAGT
GTGCTCAGGATGTGGCATAAAACAAAAATATGAAGAAAAATAATTGTTACTTGTAATGTA
ATTCTCATACAAATTTATCACTTTCGTTATTATTTTAAAGGAAGCAAACATGCCTGTTGG
CAGTTCCATCTTTGTCTTTATTGATAAAATGTTGAGACGCAACAGGCTTCTTTCCAGGAT
CTTGCAACTGTTGCCTCAATGACATCGAATAGACTGCACAATGGACACATATAACTCGTC
TCGGTCTCAGAGTTCAATTCTAAGGATAAAGGATTCCAAGAAGAAAGCACTGACCATCTC
CTGACCATACTCCAACAATCAGGTCATGCCCATCTTTGGCCTCCGAGTCAAATGCATGAC
AAAGCGGGTTTGAGTTGCTGAAGTGGATGGACTTTACTGGATCCTGGTGCAATTAACAAC
TTGATCAGACAAACACAAGGCTGCATATCTGTAGGTAACTTCGTCATGCATTGGACAAGG
GAACTAATACTTTGTCATGTGAGTTGAGATCACTAATGAACAGTGTATCTGCGGTATTGA
AGATGATGTATGTTCCCTTGCCATCATAATTCACCACAGCTTGAGATCCACCAATGCCCG
TTGACATACCAACGCCGCCACCCACACGGCTGCTCCCTGAAACAGCCCTACTGACACCGT
TGCTGCCTGCAAAGCTAAGTGTCCGGCTCCCATTCCCAGTACCAAGCAGTCTCGCAGCTG
CAGATCGCATGCCACTGCTGGAACTTGGTGTTGAAGGTGTAGAGCCCTGCCCCACTGGTT
TCTCCTTCAAATATGCCACCGTCATCTGCCATCGTCAAAAGTAATTGATGTAATCTTAAC
TTTTCATAATACAGGAATATACATCGCAATGAAGTCGATCATCACGAAGCAAGCAAATAA
CTAAAACAATCGCTTATGCAAAAAGAATCCCAAACAAGAAACCCATCTAAATTCATCAGT
CCGCAAGGTTCCATAAATGCCACGATCCAAAACTTACCCGAAACCCTAACTAAAACCAAA
CAAAACCCAACCAGATACGCGAAAAAAGACACGTCTAAATCCGGCACCTGATCAAGTCAA
CACCCAACGCCACAGCTCAATTCCCCATCCCATCCGAGCGACCCATCGAGATCCCAATCG
CCGTCCCAACCCGCGCGCTAACCGCAAACCCCGGGGCGTGATCACCGGTACCGCGGAGTC
GCCGCCCTCCATACCTCGGAAACAGTCTTTCCACCAGCGCCGTGGTTGTAGTGCAGCACG
GAGGGGGAGTGGGTCTTCTCGTACTGCAGCTTATGCCGGCCCTCGGGAGTCTTGAAGTAA
GTCTTCAGTCCAGGAGCGCCCCCGGCGGCACCGCCCCCGCCAGCCGACGACGACGTCGCC
ATACCCACAGGCCGGGCACCAGCTAC