Contig Data
morexGenes
Links



Map Locations of contig_1587536 (2366 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1587536

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_20002 1 990 bp MLOC_20002.1 Available Available LOC_Os10g30370.2, FRAME:-1, EVALUE:2e-54, 13110.m02614 protein RNA recognition motif containing protein, putative, expressed





CDS Structure of MLOC_20002






Contig Sequence (2366 bp)

>contig_1587536 2366 assembly3_WGSMorex_rbca.fasta
CTGTACAAGAAGAGAAGCAGCTGTCAGAGGAGCTCCAAGCACTGATGCAGCGGGCAATCC
AACAGATGAGTTCAATCCAGGAGCACCAATGCCACCAGTTAAGCTGCACACACAAAAGTA
AGATTAAAGGACATGAACTGCAAGATCCTATAAACCGTACATAGGATGATTCTGCCCAAA
ACCATGAGTGGCATAAACTAACAAGAAGTTACATAACATTTGGTGCACAAACAATCGTTC
CCTGACATGCTAGTCATCATTCATTATAGTGTGGGCCTGTGGGGACAACAGCTACAACCA
GTAAAAGGACCATCTCAGATAGGGAAAAGATTAATTTTGTTGAGATTAATATCTTCACAC
AAAGCTCAGATGTATGTTACGACCAAGATCTGTATACATATAATAGTTGTCTGCAATGTC
TGCCACCACACTCATAGAAGGGCAGAGCAAAAACTAACACAATAGCAGTACCTGGTTGCA
GTGCCACTGCGGTCCAATTTCCGCATCAGAAGGGCTCTAGAGCTTGCATTTAATGCCTGC
AAACGTTGAGTACAAAATGAATACACATGATCTTCGACAGGATAGCATTATACTATGAGA
TAAGAGCATAATACTACACCCAGATATCAGTGCCATTAAGCAGCATTTATAGTCAAGGAT
ACAACAAAAACAGAAGCAATACAATTTTAAGAAATAGACTATCAAGAAAATCAGAAGATG
CTTCGCCCCAGTACTATAAAAAAAGGTTTCAAAAGAAACTACAGGTTAAAGTAGAGAACT
GAGAAAGGACACCCTCGCCATTTTCAAGGACCAAACTCATGAAATACTATAGACCGGACT
TGATACCCAACATAATGCTTAGCAAGGTCGCATTTGCTCATAGCAGTGGTATGACAAAAA
AATAATATAAGTATCTAAAAATATTTGATTATTTTCACTGAAGGGGCTACCTACTAACGA
ATAACACAAAGCCTCTCAACCTCCCCACCTGAATTTTCAGTAGTAAGCTTAGTGGATAAG
AGAATGAGCACGTGAAGTAACTATACGAGCAAGTGATGTGACCAAGGCACAAACATGTAC
CATATGTCCCTTCGTACAAATGACTGAAAAGAATATTCTCTGCAAGGTTGAAACCTTCTG
CAGAAGTAACGAATTTCCTATATGACACTACCTATTGGGCAAGGAAAAAACAATACAAAG
ACAAGAGAAGCCCCATCCTAAGAGTCTCATGTATAACCCTACCTTTTGGAGAAGTACGAA
CAGAAAAGAAAACAAGAAAAAGACATGAAAACCCACAGTAATAAAGTAAGTAGTGTGGAA
ACAAGAAACCCACCAAGCCTCCACCTTCGTCATCATCTAAATCTCCAGTAGTTGTGCCAA
GTTGCACACCGCCCTGATCAGTAACAGCCGAGACCTGGTTGAAATAATACAAACTGTCAG
GTGAGTATGTCTTAAAACTCTTTCTGGAGCAACACAACACATATCAATAAGTTACCTTTA
TTACTCTCCCAGCAATATCAAGTTGGCCATTTAAACTCTGAGCAGCTTTTGCATCTTCAA
GCCGTGCAAACTGCATGATGCAAGTAACAATGAGAAATTAAGAGTCATGGCAGCAGCTTA
ATGGGAATATATATATATCCAAGAGAAGAGCTGCATGTGAATATGTCAATATCTCTACTT
GCCTGAATGAAACCAAAACCTTTGCACAGCCCAGTGAGTGGATCTACCGGCAGCTGGACA
AGCTCCACTTGCCCAAATGGTTCAAAGACCTGAAAATGCAAACTCGTTATAACAGGCTAC
GTGAAAAAAGTTGTGGTTATGTCTCACCATACATAACTTACAGTGCACTTAATTAAAAGT
TTAAAACATAATTCAGAAAGTGGATTTGGAGAACTATTCTGCAAGGAACCACAATAGAAT
TTCTACAGGTACATCATATGGTGGCGGTGAGTAGAGATTAAAGAACGATTCCACAGCAGG
TCCGACTCTTTCTTTAACACCTTGAAATAAATCTCACTTAAAATGAGTAACAATGGGTTA
GACCATCATTTTTCTTTAGTTTATTTCAGACGATCGGCGTGTCTAACAGAAATTGTTTCG
TTCAAGATAATGAGTACTTTTAAGCGCGCTGGCTCTCTTTTTCAATTACCTTCCTCGCGT
ATGTGCAAGACCGAATCCATTCTTTTTCGAAATCAATTTCGGAAAAGAACTACTAATCCT
TAACTTTTCGAGGAATCCTTCATCAGTGGTTGTGAATGGCTGACTTCTTCAATCCTTTCA
ACCTTGGTTCCGTAGGAGCAAGTCAGAAAGATTGAGAAACAGAACCATCTGATTTGATTC
GTTCCCAATAGCCATGAGATGATCAT