Contig Data
morexGenes
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Map Locations of contig_158736 (5098 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_158736

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19965 2 1816 bp MLOC_19965.1 Available Available LOC_Os02g54990.2, FRAME:+1, EVALUE:0.0, 13102.m06298 protein TMS membrane protein/tumour differentially expressed protein, putative, expressed
MLOC_19966 1 954 bp AK358490 Available Available None





CDS Structure of MLOC_19965






CDS Structure of MLOC_19966






Contig Sequence (5098 bp)

>contig_158736 5098 assembly3_WGSMorex_rbca.fasta
ATATAGAACGGTTACACATATGTTCTTTTTTAGATCATATGTGCACATATCTTTTGTCAT
TTCTTCTCTATATTGCATGTCTTCTTCCGTCTTTATTATGATGGTTATTTTTATCCTGGT
TTTTCTTTTAATAAAATCTCATGATAAATTACTCATATTTCCAACAAGAGTTACAATCCT
TCGACAAAAGTTCCTCAATACACGAGGGACCTCCGTCGAGCCACACAACCGTGGCTTGTT
CAGAGCAACTATATCTTGCCAGACAATCTACAAACTATTCTTGAACCTATATAATTTTTA
TGGAATAAACAATCTATGCATGCCTTTTTTTTTTCCACTGGAAGTGTATATAGGTCTTAC
TAGTCAGTAAATGTTTGTCGCCAGGGTATTACTACTTAGTTAGTAATGTTTGTCGTCATA
GTTCAATGCGCAATTTGTTATCAGTTTTATCTGATGTTACCTGTAATCATGCAAAGACCA
CCCTAGCTTAATTTTAATCATGCAAAAAAGTCGTGTCGTACATGGTTGCTCGGTATTACC
CAAACAAACAAAAAAAGTTGTCGACAAAAAGATGAATCGGACCCGGTCTCCTTAACCGGT
CCAACCCCACCCCACCCCACCGGCCCGGCGGCCACCCGAACAATAACAAATCCGCGACCG
AATCCACCTCCTATCCTTTGCTCTCTGCCGTCCCCTCCCCAACACGCGTTCCCCACAAAT
TCCCCTCCACCGAATTCCCCCAAATCGAACCCCAGCGGCGTCGCGCGAGCTCCCCGATCG
ATTCGACCCGGCCCGACTGATCGCCGCCGGAGAAGAGAAGGGCCGCCGCCATGTGGGCCG
CGTCGTGCCTGGCGTCCTGCTGCGCCGCGTGCGCGTGCGAGGCGTGCCGCACCGCCGTCG
GCAGCATCGGCCGCCGCTCCGCGCGGATCGCCTACTGCGGCCTCTTCGCGCTCTCCCTCC
TCGCCTCCTGGGTGCTCCGCGAGGTCGCCGCGCCGCTCCTCCAGTCCATCCCATGTACGC
CGCCCCGCTCCCTCCCCCTACCCTAACCTAACCCGACGACCCTGGATTCGTTTGCGCTCG
ATCTGACCGGCGACGCTCCTTCCGGTCGCCTGTTGCAGGGATCAACCACTTCCACAAGAC
GCCGGACCGCGAGTGGTTCGAGACGGACGCCGTGCTCAGGGTCAGCCTCGGCAACTTCCT
CTTCTTCACCATCCTCGCCGCCATCATGGCCGGCATCAAGGACCAGAAGGACCCGCGCGA
CAAGGTCCACCACGGCGGCTGGATGGCCAAGATCTTCTGCTGGGTCGTCATCGTCTTCCT
CATGTTCTTCGTTCCCAACGGCGTCGTCAGCTTCTACGGTGAGAGAGAGGCCCTTTCTCC
TTCCGCTCACGCACGCAGCTGTTTGTAGGATGGCCCGCCTGATATCTACCGCACATGGTC
ATCATAATCGTGAATATTAGGATGGATAACATTTGGTTGAATGAAACCACTATTCGTCTA
AATGAATGACAAAGCATACACTTACGAATAATAAAATCGTAGGGGACATTAGTTGCCCCT
TCCCTCAAAACCCCCGGAAAGGTTTCTTCAGGGGGGTGACTGTTTTGTTTTGCACTTTTG
AGTCTACCATGCACTAGAAAATGAATGGAAAGGGTTCGTCTGGGCACTTCTTGAACCAAA
CATTAATATCAGATGGGGATCACTGAATCAAACGAATAGATGGTAATGTAGAATAACTAA
TATGCAAAACAATCGTGAATTCTGTGTTATCAAGATATATACTAGTATCCTTTTAATGAT
GGCATAAAGAAAGGGTAAACAATCGTTAATATAAGAGTATGGAAATTAGTCAAAATGTGA
TTGAGCTGTTGGCTAGACATTCTATTGCATTAGAAAGGTGTAAAGAAATGTTGGTGCTGT
CAGTCGTGGTTATTGTTGTATGAAGTCTGTGTTTGCAAGGCTCTTCTTACTAATATCTTC
TCTCTCCCTTGACTTAACTGAATGCGAGCTGATTAGATTTGTTTCAAATTTGCTCCTGCT
ATCAGAGACATCAACTGTTGCTGTCTATCTTTGCTTATTTGCTTGTTTAATAAAACCTGA
GTTGGGATTTGGGATTGTACTGGAGGAGTTATTTAATATTTTTTGAAAAATGGATTATCC
TTTTGCTGTCTTATGGATTAATCTAGCTGTTCGTTTCTGTATTCTTTCTTTAGGCAATAT
AGTACCCATAAACCATTGGCTAATACTCTTGCCAATTTAAACTGTCAACATGTTTTGGAT
TAGTTTATGCTATTTGCTTTACTGGAAACTGCGTTGTCATCATTATAAAAGTTTATTTTA
CTGAAGGTGATGCTTACTGTAGTTATATATTTATGCAGAATCAATCTCCAAGTTTGGATC
TGGACTGTTCCTACTCGTTCAGGTTGTTCTTCTGTTGGACTTCGTGCACGGATGGAATGA
GAACTGGGTTGCTAAAGATGAACAGTTCTGGTGGGTACCTTGTCTTTGTCTTTCAATTAG
CTGAGTTTCTATTGGTTAAAGAAGTGCACCTTAGTTCTGTACAAAATATATTTTTACTTG
CTCTTCATCAATGTAGGTACATGGCTCTGTTGGTTGTCTCGGTTGTTTGTTATATTGGCT
CATTTGCTTTCTCGGGTCTACTCTTTCACTGGTTCACTCCATCGGGACAGGACTGCGGAC
TCAATATGTTCTTCATTGTCTCCACACTGATTCTTGTCGTTGTATTCGCTATTGTTGCGC
TGCACCCAAAGGTATTCTTCTTTTCACATTCTCCTACAACTTAGCTTTTGTTAGTGTCAT
GTTTGGTTGATCCATAATGTTTTTGCTCACTGCTATGCCATGAAAATTACATGATTTTGT
TTGTGCACTATGATAATTACTATGAAGATCTGCTCCTTAGATTTCTTTTAGGACTTTTAG
CTTCTAGTTGGGACACAGGCAATCGGTGCTGTTAGTCTATTATACATATGGTGGATGTAG
TTTTTTGGTTTACATATGGTGGATGTAGTTTTTTGGTTTACATATGGTGGATGTAGTATT
TTGGTTTATATAAAGCATTAATCTGGGTCTTATGGTTTGGGCAGGTCAATGGAAGCTTGT
TGCCTGCATCAGTCATAGGCCTCTACTGCACATACCTCTGCTACAGTGGACTCTCCAGTG
AGCCAAGGGATTATGAGTGCAACGGTCTTCACAATCACTCCAAAGCTATGTCAACCGGTA
GCCTTACATTGGGATTATGCACCACCATCCTTTCTGTGGTCTACTCTGCTGTTCGTGCTG
GCTCTTCTGCAACTGTGCTCTCAGCACCAGACTCACCACGCGCCGGTTGGATTTCTTTCT
CTGGCCACTGAACTAATTAATTATGTAGCACGCGTGTTGCTACTTGCTGAACTCATTGAT
GTTTTCTTCAGGTGCCGATAAGCCACTGCTCCCCTTCAGCAAGGCAGACGAGGAGGAAAC
CAAGGATGTGGCCAAGCCAGTGACATACTCCTACTCGTTCTTCCACCTCATCTTCTCCCT
GGCAAGCATGTACTCTGCCATGCTCCTGACTGGCTGGTCGACCTCGGTTGGGGAGAGCGG
AATGCTTGTCGATGTCGGGTGGCCGTCTGTCTGGGTCAGGATCGCGACCCAGTGGGCAAC
AGCAGGCCTGTTCATCTGGTCCCTCGTTGCTCCCCTCCTGTTCCCAGACAGGGAGTTCTA
GGTCAACCTGGTTACCTACCTGCTAAGAGTGCATCATCCGTTTGGAGCACCTACGTATCA
TATCGAACGTGTTTCGGCTGTGATAGCTAAGCTGACTATCTGTATCTGGTCTGTAATATT
GTGTGAGCAAACCCATGGCAAGGAGCCGGTGTTTGTGACGTTGTCGAGTCTGGTCCTGCA
TAATGTGTGACCTAAGGCATTGTTGCCAGTATTTCAACAGTGAAGATACGGTCTTTGGTT
GTATATATATTGAAGTTGATCTATCTCTTTTACATTGGTGTGTTCCGTTCTACGAGCCTG
AGTATGAATAAAATTCATAGTATGTTATTTTCATGATTTCAGTAATCTGAACAGACCCAC
TCTATTCCTTTGCTTGCGCTATTTCTTTTCAAATATACACTACGTGGATGAAATTGTTTC
TTGAGAAGTTAAAAATTCAGTCTCGGCTTATGAACTTGTCTTGCCATGCAACGTCTGATG
GCAAAATGACGCTAGTATATATGAGTAGATATATAAACAAGGGTAAAAACATTAAGTGTT
TCTACTAGCTGACTAGATTAAAATGCGCTGAGAGTATAATCATATCCCGGCCTCTAATTA
TGCTTATTTACAATCTTCTGTGTGTCCTAATGAAGTTGGTTGTGATCAAAGAAACCACGG
AGCCACACGCATACGACGCCGCGGCGAGCACGGCGGCGGCGCCCAGCAAGACGGCCTTCC
ATTGCCTCGTCGCCGCCAAGACGGCCGCAGCGGCAGCCACGGCGGCGAGCACGACGAAGG
CCTTCTTCAGGGCGGTGTATCTGTTGACGGTGTCCCTGCACCCCTTGCAGTGCACGACGT
GCCGGAAGTATCTATTGGTGGGGTTGGGCGCGTGCTGCGTGCCGGCGCCGCCCTTGGCCG
GGAACGACGCGTTGGTGCCCGCGGCGGCCCCCGCCGGCGCCTGCTCCACGACGGCCGGCA
CTGGCGGCGGCGAGATGGTGCTGTGGCCGAAGTAGTATGGCATGCCATGCCCCGCCCTGT
CCATCCACCGCCGGTACTCGGCCACCCAGGTGTCCGACGACCGGAGGTTGAGGTAGAGCT
CCTTGGTGGGCACCTTCTCCCGGAGCAACACCTCGTTCTGCGACGACAGGAACCCCATGT
CCTGCTCGAACACCTTGCACGCGTTCTGGTGCAGGTACCATTTCGGCAGCACCTTCACCA
GCGGCGAGCTCGCCGTGGACCCGAACCGGACGAGCAGCATCGACTTCCCCTGCCCGGCCG
GCCGGCACAGGAACTGCGCCGAGAAGCACTGCTCCTTGCCGTCCTTGTCCACGAACTCGA
GCGTGTTGGAGAGCACGCAGGGCGCCTCGAACCGGAGCAGGTTGCGGAGGTGCGGCGC