Map Locations of contig_158724 (5657 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_158724

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19934 1 1454 bp MLOC_19934.1 Available Available LOC_Os01g26160.2, FRAME:-3, EVALUE:0.0, 13101.m02770 protein exportin 1, putative, expressed





CDS Structure of MLOC_19934






Contig Sequence (5657 bp)

>contig_158724 5657 assembly3_WGSMorex_rbca.fasta
CTAGTCACATTTTAGTATTTAGATACTTTCATTTCTAGACAAATCTAAGACAANNNTTTT
GGGACGGAGGGAGTATATACCATGGTTATTTACACCACGTAATTAGCTATAGCTTTGGTA
GCACTCTGTTATGTATAGCATAAGAATCACTTCCAGGGTCTAAATACCTCTTGGAGAGGT
AGGGACAGTTATCTAAGATATGATTCTCAAATAACATATTTTCATCAAGTAAATACTCTG
TCATGATCTCAGAAAAAATACCTGTTTAGGTGCAGGATCTTTGTCTGATAGATAAAGATA
TATTTCTCGACAAAGTCCAATAAGCTCTGCACTCACAACGGCATTCAATTCAACAGATAA
GCCCTGTATTATAGAAGAAAATAGATCCTTTCCAACAAACTGCCTCAGCTCAGCCCGGTT
TGTTGCAACAGCAAGGTGAATCAATGCACCACAAAAGGGTATTACTTTAGTCACTGCTTC
ACTATCTGGCCAACTGAACACTTCAACAGTTATTCTCAAAGCAGGCAGGGCAGTGCCAGC
ATTAAGCATAAGAAATCTGTGAATGATTAGTACCAGTCAGTCTTTGTTCATTTGTTGAGA
TGTTACTCGATGAAATTTAAGAACTAAGGTAAACACATATATGAGGCAGGAAAATTTTCC
AGTACCCAGTAAGAGAGCTGGAAGCAAATGACTCCAGACTTTTAAGAGAAAAATCAATCC
GGTTGACAGGTCCAAGTTGTTCCAAAGATGGAAGTCCACTATTCAAACCAGGTAATGCTA
ACACCCAAAGCACAGAACAAATTTCACGAGTCAAGTCCCGTAACAGCTTCTCTTCCATCA
CCTCAACCTTAAGTTCTGACCCAGAAAGATTACCGAAGTTATCAGGAACCTTAGCTCGGC
CCTCACGTAGAAGACTTGACCATGAATAATCAAGAGCTTGCTGACAGTGAACGAATATTG
GTTGCAGAAGGTTCACTGTCCATATCTGCCATAGTTCAGCAGGGCAATATTTAACCAAAG
GAACAACAGCAAGGTGCATGAGTTGGCGCAAATGACGAAACTCCATAACTTGCACATTCT
CCATAAGAGCAAGGATGACAGAGGAACCATCTATGCATCGGAAAAATGCTTCACCAAGAG
TAGCTGCTAATCCTATAAGATTGTACCTGTAGTATGGTATTCTCACTTGGGTCAAACATA
GATTACAGGAGCAATGACTACTTAACATGCAAGATGAAAATTTCTGCAAAGTGTAGCTCA
ACCGTTCTTGAGTCATCAAGGATTATCAGAATATCAAATTGATGAACAATATAGGTGGTA
CCAATAATGCTCTTTGAGATTGAACGAGGATTCAACAGAACTTCAAAAATACTAAGTGAA
TATTTGCGGTACTCCAATTAAGAATCCTTACCCACTGTCACGGACGCCTCGTAACCAGTT
TCTTATGTTATTTTCCTTAGACTCTCCCTCCCTTTGAAGATCCAGTAATCCATCAGCAGG
TGCAACCTGGCCCTTGGTGAGTTTACTTGTCTCTCCCAGTAGACTGGCCTGCTCCGAGAT
AGTCATGCTTTTGGCCGCTTTGATTTCTCCTGTCAGCGACTGAGCAAATGGCTCGGCCCA
AAGTGCATGTATACATCTCAGCAGCTGAAGATTGTGCAACAAAAGGGAAACAGAAAGTAT
CAGATTAGCCTATGTATAATGGCTAAAGAGAAGTTAATGAAAATCAGGCGAAAAGCATGT
ATAGTCAGCCATCACCATACTGAAGATCATCCAACAAAAGAGGCAAATAAAAACCGAGTC
CAAACTATAGTCTGTCATCAGATTACTCAGTTCATAATAGCTACAGAAGAATTAAAAAAG
GATCCTGATTATCAAACTTCCATCCTTGATGCCTTGTCCTTATTATCTAAGCTGATAAAA
ACAATGTGTCAAATTACCCTTAAGAGAGGCGGCAGAATCCATGATAGATGTGAAGACATC
GGATGCAGATAACCAGTTGCTGTTGTTGTGGTGGTGGCTGCTTGTGGAGCTGTTGTAGAC
CTTTTGGTACCGCTCCGCTTGAGTGCCTTCTCAAAGAATGTAACCGTGTGATAAATTGAC
CACATAAATTGGGTGTCAGCAAACATGTCTGTCAAACCAGATGGGTCAGACAAGTATGCA
GTTTGCCATTCCACTTGGGTCCATGTTTTGTTAAGAGGTTCAAGTAACCAGGCCAGGACT
TCCTGTTGCTGTTGAATCCTACAAAGATGTTAAAATATATGAAATTATGGTGGAAGCAAC
ATCATGTTATCATAGTTGCGAAAATATATGTGAAAAAGGTGTCACAGCGAAATACCCAGA
GGAGGAGGCCATAATAAGAAACGCTTCACATAAGTGATCATGCTCAGCACGTAGTAAGCG
GCCCTCTCCTTGAAGGTATGCCATGGTATCGGCAATGTTCTGCATCATTGGCAAAGCACT
CTTAGCAACCAAATTTCTGGAAGTAAGCAGATGTGACCGTGAACTGCATTCTGTAAAGCA
AATATACATGATGCATGCCGAAATAGGTTAGAAAGCGAGCCTAGATCATTCTAATCCAGT
TCATGTACTTTTTTCTACCTAGTTGAAGGCTGGCTACAATGTTCACTGACTTATAAATGT
TCTGTATGCTTGTAGAGTGCACCAAAGCAGCCACATTTCAATTGCTGCCAGACGGCCAGC
AAGACGTACAACACACAAGACATGCGGTGATGTCATGTCCAAGGAGTAAAGAGACTCAAG
GAAAGAGTCAGCCAGAGGAGAGTCCAGGAGGTGGACGAACTGAATCAGGAACATGAGTTA
AGAGACAGAATTAGGAAAGATGACTTGGGAAGAGTTCAGGAAGCATGCATCAAATACATG
TTTCAGGAGGTTTCCTGATTATAATACAGCAGGTCAAATTAGGATGTGGTAGTGTCAGCT
GTGTAACATTTGAGGGAATCAAGCAAGAAGAATCAATCTACTCTTCAATCATACCGTATG
TATACCTCCCCTTGCAGCCACAAGGTAAGGTTCGCACCACTATAATTTAATGGTGTATCT
TTACAAATCGACTGAACTATACCAAATTGAGCGGCCATCAACAGAAATCGCCAGAAATCA
CCTACACGACGAGCATGTTTTCCTCATTTATACTTTAATCCAAACAACACAAGTGCAATT
AACAACTTCAAGATGGTACTGTAAGTAGCCCGTCGTAGATTCGCAAATAGATATAATCTG
CCATAGCCTCACAAACATGTTATAGAGTAGCTGTGAGTAGAATGGTGACTCCTAAAAAAT
GTTTTCCAGAGTGTTCCAGCTATAAGTAGAAGTATGTGAAGGCTTCCCAAAGCCCTATAA
ATAGAGGTCCTCACCTCTAGTTTGGGACCAGACTATGTACCCACTATCTATAATAGAACT
TGTTGTTCCTATCTAAAGATCTTGGACTAGATCTTGTGTTCTAGGAGTATTGGATTGAAC
TCCTGTCGGCATATCAGCCCTATCTCTGTCTTTAGAGTGATATCAAGCGCAGCACGTTGA
AGTAGTTCCTTCAACACTTGTGTTGTGCACATTGTAGCAGCAAGGTGAAGTTGCTCCTCC
ACAACCTTGTGCTGCTTCAGGTGGTACCAGAGCCCCGTTGATCGATACAAGTTCTTGTTG
TTCTCTTTGAGAGCAAGCTGCCGCAAGCAATGGAGCAATTGGAGAAGAGGATGGATGCTG
CAGAACAACAAATCAAAGAGCTGCGTGATGATCTTAATCGGAGATTTGACCAGCTGGTTG
AGATGATAAGGGTGTCCCCCGTGCTGCCAATGAAGAAGATTCATCTAAAAAAGAAGATGT
TCAACGACGAAGAGGGGGTGGGGGTAATCTTGGAGCAAGACCACCATGACAACGTGCAGT
TCAGCGTACTTCAAGAAGGCCTATTGAGTACCCACTCTACATATGCAAGGGATACATACA
AGGTGAAAGCTGAGATCCCAACTTTTAATGAAAATATTGATATTGAATGGTGCCTTGATT
GGTTATACGAAGTGGAGACTTTCTTTGAGGTCATGGAGGTTCCGGAAGATCGTAGAGTTC
CTTTGGTCGCGTACAAGCTGAAAGGAGGAGCCGCTGCATGGTGGCATCGCGTTTTCAAGA
AGAACGCAGGCTGAGAGGAGAACCTCGTATGAGAACTTGGCAGCAAATGAAAAGTCTTTT
GGAAGAGAGATTCCCGTTGATTATGACCAGATCCTGTTTATCCAATTCCAAAATTGTGCT
CAAGGAAATAGGACTGTTTCAGATTACACGGAGGAATTTCTAAGGCTACAAGTGAGGTGC
AACCTTGCCGAAGCTGAAGATCAACAAGTTGCAAGGTACATCAATGNTCTCAATGATGCT
ATTCAAGATCGATCAATGATGCAACAAATCTGGTCCACTGATCAAGCACAAGCTCTAGCC
CGAGATGTTTGTGAGGATGAGAAAGAAAACTAAGACTCCATACCCTCCATATCTCCATAC
CGAAGGCTCGTCTAGGAGCCAGCCTAACAGAGTGGAAGAAAAGACCGCTCCACCAAAGGC
AAAACGACCCATCCAGAAGCAAACTAGAGGGTAAATCCAATGAAGGCCCAAAATGCCATA
AATGTGGTGAAGAGGGACAAATATCCAGCGGTTGCCCATGAAGGAAATTTGTTAACACAA
CTATCCATGATGGTGAAGACAATGAGGAAGAATATGAATCTGAAGATGTAGAGGGACAAG
AGGTTTGTCAAGAAGAAGGTGAAGAGGTGGTATGTGTGATTCAGCGTCTCCTATGTTCGA
CACCACAACCTGACGACAGATAACGGAAGAAAATATTTGAGAGCAAGTGCACGGTGAATG
GCAAGGTATGTAAATTAGTGATAGATAGTTGCAGCTGTAAGAATCTTATCTCCCAAAAGT
TAGTGAGCCATTTAAAGCTTGAGACTCATGATCATCCAAACCCCTACACTATTGGGTGGA
TCAAGAAAGGAGTGAATATGAGGATCACCAAACAAAGCAACCTGCCACTTTCTTTGGGCA
AGCACTACCGGTCAAATTTGTTGTGTGACGTAGTTGATATGGTTGCCAGCCATGTTCTTC
TTGGGAGACCTTGGCAATTTGATGTGGATACTGCACACAAGGAGAAGGAAAATTCTTACT
CTTTCATTTGGAACAAGAGAAGGATCAGTATTCTACCAAATAAAACTGATGGTAATATCT
CTAAGGAGGGGAAAAGTATGTTAACTATCTCCCACACCTCTAATGAGTTTATGGAAGACT
TGAAGGAGACAAAGTTGTGTGCTACACTTACTGTAAAAGGAGAAGAGCATCCGGTTGTTG
ATGTTGCAGTATATGTGGACTGCGCTAGCCCTTTCCATCAGTTCGGACTTTTGGTTGCGT
TGGCTAATGCATGAAGCTTAAGCTTAACATGGTATCGGAGCTAAGGTCTTGAGTTCAAGT
TCTGGCTTTCGCAATTTATTTAAAAAATTGCTGGTAATCCCCCTGTGTGTCCACGTAGAG
GCCTCTTGAGTCATACGTGAGTTTCGCGCGCCGTCGCTCTCTTCCGGTTGCAAATGTTGA
CTTGTCTTCCCCGTCACACGTGAGAGGGGGTGTTACAGTATANNTGGATTGCACTAGCCC
TTTCCATCAGTTCGGAC