Contig Data
morexGenes
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Map Locations of contig_158718 (6976 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_158718

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19924 1 898 bp MLOC_19924.1 Available Available LOC_Os07g48780.1, FRAME:+2, EVALUE:3e-101, 13107.m05229 protein OsCam1-2 - Calmodulin, expressed





CDS Structure of MLOC_19924






Contig Sequence (6976 bp)

>contig_158718 6976 assembly3_WGSMorex_rbca.fasta
CCGGCTAGCATCCAATGCTACATAGTTAGTGAGACCGGACCATCCACCGTGTCATATGCT
AGTCTGATTGGTTGCATGTCCACACAACCCTTTCGACTAGGGACCATTTAGAACACTCAT
CATACAATGGATAATCTCACAAACAAGTCACCTACTTGTCGGTACACATCATTGATAATA
TCCAAGGACTATATTTATTCATAAACAAATAGGAAATATCATCATGATTGCCTCTAGGGC
ATATCTCCAACAATTGTGACTTATACCCTCGTGTTAGACGGAATGAATATTGATTATGAA
ATCTTGGAGAGTATAGAACTCCACTCTTGCATGTTTAGAACTTTTTTTGCAAACTCGCAT
ATGGATTCAGATAAAAGGATTCGATTTCACTTTATTTTTTACAAATCTATCAGTTTTTAT
CAAACAGTCTAGCCTCTTGACTATTATTGGGATACTCTCACTACTCACATCTACTTAAGC
TCATATGCAAGTTGCCATTAAGGGCGGTTATTTCTCATAAAAAATATCTCCTACTTAAAA
ATAAATATACATGTTTGAACCACTAAAAATTTAGATGTATATTTAGACACGACCCTAAAT
GCATATTCATACATGATTGGAATTGAACCACTAAATATGCATGCCCTGTTGCAATGCAGA
TGCCCTTTTACTATTGATGTTACATTTAAACCTTTATGATTGCTAGATAGTAGAAATCCA
ATATTGTTTTTTCTTGTGAAGTGTAGTTCACTTTATTCCCTTCTTGTTAGAGCCGTTGGT
CGAGATCTAGGGCCTAAACAATTTGTGACCATAGACTGCTCAGAGTTATCCTATTTGATC
TTCAAGCGCAATCCTTTAGTTGCTCTATTGCATATTTGAGCCATAATACCATACATTTCC
AATCAATAATCGACTACTCGGTTTACTTCATGTGAGTTGTTACTATCTCTTAAAAAATGT
TTTTGCATTTGTCTTATGAACAATTGAATTCATTATCGGCCTTTGAATTTTACTGCAAAT
TTGCTACACATTTTTTATTTGAGAGATACACGTGAGCTTTTTTTGTTTAGGTTTGCTAAT
ATGAATAGTTCATCTCATACCCTCTAATAGAACATGACAAGAAATGGGAAGAATTAACCT
ACTGGGAGGCATGATCAAGGTCATCGCTCATGTTAGATGACATTGTTACGGGCGCCCACA
TACGGTGTGTATGCATGTTACCTACAACGTCGTTGTTTCTTCCCTCGGTCGGGGGAGTGG
TCCACGAGCCACTGCCTGTAGGCAATATCTTTGGGCCAGCAACTATCGTTGATCAAGGGT
ACATATAAACCAGAATAGGAGAGGGGGTGGTGCTCTACGCCGTGGTAGGCAGAGGAAGCG
AGGCTGGGAGAGGAGGGAGCAGACGACCCTATGGCGGGACAAGCGACGACTACGTCATCT
GAGTTGTTGAATTTGTGCCTTGTGCAGTGGGGATAAGGGATGTGTGTTGCGTCTGTGTGG
TGAGAGGTGAGGAATAGCTTTTCCTTTTTGAGGAAGGCAATTTATTTATTCGGAATAAAG
AGGAATAGCTTATTTTCCCTTTTCCCTTGTGAACCGAGAGGTGTGACTATTATGCAATGA
GAGAAGTGTCAAATATTCTAGAAATAGCAAAAAATCTTTTAAAGAGAATAGCCAAACAAG
TGATCTAGAGAATGTCCTACGTTGCTACAAAGCGGGATGCGACTCACTCCACTCAAAGAA
AAATATGATGCGACCCACTCAGCTCAAGGTGGTCACGCGCTTGCATCTAGCGGCTAGCCA
ATGTATGCAGATTTTGCGTTCGTATACATTCATTGACCAGTTTTTCTTGTCCACCGTAAA
AAACATGCATACCATATACTCCATTCGTTTTTAAATACAAGTCTTTTTAAAGATCTATTA
CAAACTATATATGAAACAAAATGAGTATTTTAAATATGTCTATATGCATCCTTATGTGAT
TCATACTGGAATCTTTAAAAAGCCTTATATTTAAGAATGGATGGAGTATATATTTTGGAC
TCATCCTCTACATCGCATTCGATAAAGAATAAAGCTATGAGATACTGAAATTACTGAGAT
TTTCAAGAAACTCCAATAATGCACTTGAAATAGCATTTCACAACTTATATTCTCTACTGG
CTGATATTCCAACGAGCACGCACAAGTATATTTATCTATTTTATTTTCATATTCAACATG
CCTGCAATTATTTTATCATTTTTACATTCAAGATAATAATAGTTTATCCATTACAAAAAT
ATGTTGGGTTATTATGTACTTCCTTCATTTTTAAATATAATTTTTTATAAAGATTTCTAT
ACAAACTACATGCATACATATGTATCTAGACATATTTCAGAATGTTGATTTACTTATTTT
GTTCTGTATATAGTATGTATTGAAATATAAAAATATATATTTAAAAACGATGGGAGTATA
TGATTTTATGTTCTTCATGCATATGTTGTCAAATTAAATTTTTAATACATTGCAACTAAA
AAGAAATAATGGAGATGCAGGTGAAGTGGGAAAACGGAAATACATTGCATCAAGTACACT
TATCGACTGTTGCTTGAAATATTTTCTATACATGTAAAATTCGAAATGCATTATCTTTCA
ATATGCTATCAAAGAAATATATTAAAAGATCCGTAACAACGCATGAACATTCTACTAGCA
TTACATGTAAAAATGGCTTTCTTCCGCAAAAAAAAATGTAAAAATGGCTTTGTTTGAATA
TATAAGGCAAGGAGGGCAGTTGGAGTAATTCGCCCCGCGACGTTAACGGGGGCGTGGACG
GCGGAACGGACCGGACGGGGTGCGGGCGCGCATAAAGCCCGGCAAAATTCCCCGCCGCGA
GGCCACAAATCGCTCCCGGCCCCCCCTCCTTCCTCCTCTCCCCCGCCCGTACGGTCAAAC
AAGAGACCCCCCACCCCCCTCTCTCCTCCACCTCCAGTGCTCGCCGCGAGAAGCCGAGAA
GGAAGAGCCTGAGAAGGTTGCATCATGGCGGACCAACTCACCGACGACCAGATCGCCGAG
TTCAAGGAAGCCTTCAGCCTATTCGACAAGGACGGCGACGGTAAGTAATTTCTGTAACTC
CTTGTTTTCTTGTCCCCCTCATAGAAACATGGTGTGTTTTCTCCTACTTATGCTGTGATC
CGTCTCAGTCTGGATTCTCTTCGCTTCCCGTTAACGAAGAAACAAGAACACCATTTCATC
ATCGATGTCTACTCTCTCTCTTTGATCTAGCATAGAATTGGGAGTTAGGGACATCTTATG
TGTTACATTAGATGGCTAGAGACTGAAAATTTATGCCCAGGCGTCCAGTAGCCGGAATGC
CAGATTAAGGATCGCACATACTGCGTCGAAAGCAAAGGCAAATCGCGGCGCGGCATGCCA
CCGCCCTGCCGTACTCTGTACTGCCGTCTAGTGCACGGCTGCGGGTCACTATCTCGCGTA
GTAACTGCTGTGGAAATTATGTCATCAAATCGATGTGATTGGGTCACGTCAGATTTGACC
TCGTCTCGGATCCAGATGTGGCGAAGCGCTAGATCCTACCCGGATGTGGAGTAGTCAGGG
CCGTCCAATGTCCAATGTCAGATGCTATAGGTTGAACTTGGCCATGGCAGGGGCAACGGG
TCTGCTAGTACCATCCCCTTTGTATGCTGCTTTCATTATGGATCGTATCTGCAGATCTGT
TGGAAATTCTTAGGGGGTTGAAACCCAGATCCAGCTATATGATACTAGTACGTAGTAGTA
CAATTTTAGCACCAGGGAGAATCCTTTGGTGTTGGATGGGGCTGATCAAGTGGTACTAAT
TGATTTTGGACCTGCTCAGACTTTAGTTTTGGCCTTTGATGCATATGGAGTAAGACTTGA
ACCAGTTGTTGTAACAGCGTGGTTTGATCTCTGTATGTACCACAGTAATTGATCTCTGTA
ATAGTACAGAGACGTTGCGAGTTTGATCCATTGTACATGGTGGTTGCTTCATGCGTGCAT
GTCTGATTAACTTTTTTGTTTGGTTATGATGCTCACTCTGGATATGAAGATGTGATTACC
GACTCAGTCAGAAACGTACCTGAAATTGCCGTTGTGTGCTGGACAGGTTGCATCACAACT
AAGGAGCTGGGAACAGTCATGCGTTCGCTGGGGCAGAACCCAACGGAGGCAGAGCTCCAG
GACATGATCAACGAGGTGGATGCAGACGGCAACGGCACTATCGACTTCCCGGAATTCCTC
AACCTGATGGCTCGCAAGATGAAGGACACCGACTCGGAGGAAGAGCTCAAGGAGGCTTTC
CGGGTGTTCGATAAGGACCAGAACGGCTTCATCTCGGCCGCGGAGCTCCGCCACGTCATG
ACCAACCTCGGCGAGAAGCTAACGGACGAGGAGGTGGACGAGATGATCCGCGAGGCCGAT
GTCGACGGCGACGGGCAGATCAACTACGAGGAGTTCGTTAAGGTGATGATGGCCAAGTAA
TCCCGCCGATGTGCCGGTGGACGGTGGTATTATTATTTACCGGGGAGGAGGAAATTGTGC
TATGCATATTAGTAGTAAGGAATGCGGCTCTCGTTTCCTTGTCTTTGCCCCGAACCAGAA
GAAGCGTACTAGTAGACGTAGTTGCTGAAGAACATTCATGGAATCCTCCTCCCCTCCTGC
TACCCTGTCTCTCTCCCGTGTGTCATTGAAACATCTTTCTTTCTGTGTGAATCTGCAACA
CTTGGCCCCTTCGTGATGAACCCTGATTGCAGTTGAATCCGTTTGATTCAAGTTCAGTTA
TACTCGGCCAGCGGTTTTTTCAGTTGGCAGATGTTGTATTACCTGCGATGGATGTGAGTA
GTATGTTCGTCAGGAAACATGCGACCGGCAACCAAAAATGCTGGTTGAATGGCCTGGTCG
CATGTGATGTGGACCTCCGTTGAATCGAAATCACTGCGATGTTTGGTGGAGTTTGGCTGG
ACTAACGTTTGACTGCTGAAGATGGCCCTATCCGCCCGTTTGGTTGCGAGTGTCGGAGAT
TGGTTCACGGGAAATCTCTCAAGAACCGGTTTCAACACTGGGAAGCTGGATGCACCTACG
ATTTCACCTCTCTGCTACGATCAAGATATCTGCACAAGACCACGGAGCTTACGAACCAAC
TTATGGTGTAAAACCTTACTCCTGCATTATGTATTTTCTTTCTATTGTGTTGCACAAGTG
TTACAAACTACAAGGAAAAAGAAAACTCTTCCAAAACGTAGATGGGGCTCAATCATTCGT
CCTCTCTATGGTGACCGTCTGCCTCCCTTATCCTTGCCATAGGCCTTTCTTTCCAAAACA
TTGGTGGGAAAAGGCGACCACGGGACGACAATTCAAAAGGGGACAAACTGCAACCTTTTC
TGATAAAGGTGGTCTTCATCCTGCTAAAGGCGTCGTCCATGACGCGCTCGTGGGCTCGCC
GGTGACGTCCGTCATACGCGACCGGTGTCACATTGCTCTTCTTGCACAAATCTGATAAGT
CTTGGGGCTCGCCTTCCGGAGGGACAGTTGCTTGCTCTCCTTTTATCACAAAGGGGAAAG
ATTCTTCTGGGCCGCGTGTTGGCGCAATCCTTGCCTTCTTTGTTGGCTTTGCACGTCACC
CACGTGACAGACGGACTATTGTGTGGTCAATATTGAACGGCCCCTCCAAGCGGAGGGCCT
CGCCGGAAGCAGCCTCGCGGGGGAGACCTTAAGAGGCCGCCTGCCGCTGGTGAACGAGCG
TCCGGCGAGTCCCTCTTAGAGAGACATCCATCGGGAGGCGGAGGCTCGTGGATGGCCTCC
AGAGTCCTCCATTGGGCTAGATGCTGCATTAGGTCTTCTTCGTGTGGGCGACTGGGCCGA
CAGTAGCCTACGGGCTCGTGGCACGCACGTTCTGCGAGTGGAGCACGAAATGACATGGGC
GAAACGCCCCGGGTCCTAACGAACTACAAAACCATGAGATGACGCGTGTCAGCCATGATG
GGACAGGACGTACCCACTTCTCCTACGACACCTCGATAGCCGCACATCTGCCTTAAGACT
GTCGCGCGCGCCGGGCAAGACCATCATTGCTTGCCTTCCTCGAGATGCCTCCCTTGCGTG
CTGCTTCTCCTTCCTTGCGCACACACCGCTCGCCGCTCTCCTTGTCCGCCTCCTTATTCA
CCTCCACCGCTCCTTCTCTGCCGCCATGGCACCAAAGAGGAGCACCGATGCCGCCGAGGC
ATAGGTGAAGCCGGCGTTGCTGTCCTCGACCATCAAGAACCAAGAAGGGTTGCAAAAGCT
CACCCCTCTGACGGCCAGCGCTCACAATAAGCATAGGGCCACCAAGATCTAGCCGAGCTC
GATGCTGGCCAGGGAGTTGTCGGTGACGACGCTACCATTCTTCTTCCTATGCATATTCGC
AGGTCTGCTCCCTTCATTCTCAAACTTATTCAACACAGTTCACGAGCACTACCAAATCCA
TGCGCTCAATCTCCATCCCAACTTGAAAGTGCGTTATATCGACTAGATGGGGGGTGAATA
GGCGATTTTTACAAATTCATCACTGAGGAAATTTCTAGTGAGGAAAGTCCTCAGTCCTGA
ATCGAGTGCAATGGAATAAGTACTCAAGCAAATGTGCAAGCGTGGCTATAGCTTAGTCCT
GAGAGTGAGGCAAGATGTTCAGGTTGCACATGTCGCGTGATCAGGATAAGCAGGTGATGA
ATAACTTAAATGAAGAATTTGAGGTGAGGATTTCAAAGAAAGTCTTCAGTGAAATTTTTC
AAAAGTACAGATCAAAGTCACCAACATGCAATTGAGGAAATAAAAGAGTTGAAGAAATAG
AACTCGTAACTCGATGAAGACAATGGTTTGATGACCCAGTTCCAACTGCTTTGACAATTG
TACATCTGGTTCGGAGCGGCTTGGTGTTCAAACCAAAGGACACACAGTCCCAGGACACAC
AGTCCATACCGTATTC