Contig Data
morexGenes
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Map Locations of contig_158707 (6026 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_158707

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19903 1 217 bp None Available Available None
MLOC_19900 1 194 bp None Not available Available None
MLOC_19901 1 4743 bp None Available Available None
MLOC_19902 1 436 bp MLOC_19902.1 Available Available LOC_Os06g07580.2, FRAME:+3, EVALUE:4e-37, 13106.m00790 protein expressed protein





CDS Structure of MLOC_19903






CDS Structure of MLOC_19900






CDS Structure of MLOC_19901






CDS Structure of MLOC_19902






Contig Sequence (6026 bp)

>contig_158707 6026 assembly3_WGSMorex_rbca.fasta
CATGCAATTTCATCCTCTGATACACGTTCCCATGAGACCGAACTTCAAGTTCGGAAGACC
ACTAATTTGCAACATCTTGCAAATAATCTGCAAAATTCATTTACTGCTCTGAAAGGTGTT
ACAAAATCCTTAAATACGGATAGAAACAAGCATAAAAGAGGGGAGGTGCCAATAGTAGTA
CGGTCTCTGACGAGGAGCAAGCTTCGCGTGATGGGTAAATGCAAATGAAGCAAACCCAGC
TCCTTCTCAAAAAAAAAAAAAAAAAAAGGGTATCAACCGTCCACCTGCAGGTCCATCACT
ACGCAATTTGTCCAGTGGGAGCATTCAGGTCTCAAAACAACCGCCTCACGGGACGATGCC
CGTGCAGCCTCTCGTTAGATTTTCCCTAGTATAATATCATGATAATTTGAGAGAGCACTT
TGGAAATTATAAAGCCAAAATAATATAGGCTCAAACGTAAAGGTAGACAATCTGATCTGC
ACACTACCCGTAATTCCCAAACATCAATTCAAAAATAACACTTTGGAATTTGACATACCA
ATTATTGGTCATGTTAAGCCCAAATGTTCAATTATGATATATTGCTTTTCATTTGAATAT
ATGGTAACAACCTCTGCGAGGCTGCGCTAGTCACCTGGTACAGTGCCAAAGTACATTATG
GCAAGCAACGTCTAACAACCCCAGAGGGTGTAACCATCTATTTGCAAAAGAAGGCGCCCA
CTTGCCACAAAACTTATACGTTTCAACCATGTAAGATCAACTCAGAACTGTCTACAACAC
AATTTTCAAAATAAAAACTGCCATGAACACTTGAATAAAAAAGATTTATAACTAAATGAA
AAACACAAAAAAGAAAATGCTCAAAGAGAACAAAGGAAGCACAAATCAATGCATCAGATT
TCTGGCTTGGAACCCACTGATAAGGATTACATGTGTGCACAGTATAATCATAGTCTATCA
TATGGGGAAAGGATCCTCACTTCCATTCAACTTACAAATCAAGAGCAAGAAAACAAACAG
GACAGCAGACAAAGAAGAGAGGGGATAGAGATTGCTGGGCACTATGGATCAGATTTCTGG
CTTGGAATCCTCTGATAAAGGATTTCATTTGCGCACAGTATAATCATAGTCGATCATTTG
GGGAAAGGATCCTCACTTCCACATAAACGAGAAAGCAACCTCTGACAACACAAATTTGTT
CAGTTTGGTCATCACAGGACCACAATCAATCAACATATTACCTACATTCAATACGGAGAA
ATATGCACATTTTTCAACGTTACAAAATGTGCCAGAAGACAGGTAACACGACACTGTGAA
GTAACGCGTCGTGCTGTTTAATGCTGGCCTGTGTTTCCACTCATCTATGCTTCCGTCTAC
AGGATGGCCAAACTGTCAACAATAGGCATCCTTCCAGTTGTGAAGCAACAAACACAAGAA
TAAAAATCTAGTTTTATGTAATGAACAATATGATCAAATGTATCCTCAGTTCAGGTCTCC
AAATTGCTTCCGCATAGCACCTTAGCGCATCAGAAGAACGAAAGTATTTAGTTCGATCAT
CATCAGACAGCTTCAACACCAGATAAAAAGGTACAAATCATTCTCATTGCAAACTACAAG
CAAAAAACACCACATGAATAACGAAAGATGCAGACCACAGCTCAGATATGGTCAAACAGT
AACACATAAAAATCCAAAAGAAGATGCAAAGGCTCAGATATGGTATAACCGGTTTTTCAG
TCATGATTTTTCAGAAGCATAACTGGCATCACAGCCATGGTAAACCAGAACACATAAAAC
GAAAAGAATGACAATAATGAGAATTGATCTTTTGGCTCAAATATATATTAATAAATTCAA
CCATGGTTTCCCTTGTCCTTCATAAATTAATGAATAACACATAAAAAACCAAAAGAAGAC
AAAAAGGCTAAGAAATGCGATAACAAGTTTTTCAGTCATGGTTTTTCAAAAGCAGAACTG
GCATGTTTACTGAAAATGTTTATCATCACAGCCATGGTAAACCAGAACACATAAATAAAA
AAGAATGACAATAATGAAAATAGGTCTTTTTGGCTCATATTAAGAAATTCAACCATGTTT
TCCCTTGTCCTTCATGAATTAATCAGAAGCGCGGGTAAGATTCAAATCACTGCCACAAAA
CCAAAGATACCCACATAAGGGATGGGTATTCATGCAGACAAGACAAGATAAAAGTCGTTT
CAAGTTTATGGGTGCCATCAGATAATAAGCGGAGTTTTGTAAACATAAGAAAGATTCAGT
GTTTAGCATATAATATTTAACATCATTTGCAACCCTGGATTTGATTATCTTTTCTGGCAA
AACAAGAAAAAGCGCATTTTGTGCAAAGGCATCAGATAATAAGATGAGAATATTTGTCCA
CACATAGAATTTTCCTTTGAGAGTGTAGGATATCTGATCATCACTTGCCAGCTCAAAAAA
TATAAATAGTTCAAAAAAATTGGGAACAATATCAAAGAAGAAAATCTTGGTTAGACCATT
TGACCCAAGAGCAATGGCAAACAATGCAAAGGGTTGGTAAGTAAACCATTTCTCTATCCG
CACAAGCTCCATCCCTCAGATCAAAGTGCAACTAAGAGGGATACAAGAAGCTAAGCGCAA
ACATGACAAAAAGTCGGAAATTTTAAGAAATTGACACATCCAATAAGAAAAAGATTAACA
TTTTTCTCTCAGATGCCAACCACAAGGGTAGAACATATGATGCAGACATATCAACACGAC
ATCAGTTCAGACCGCCCGTCTGCTTGTACTCTCTTCATAGAGAAAGATATAAGGCCAAAA
AAATATCAACACAGCTCAAAGCAATTAAAAACATTAACATATTTGTCCAGCCATCAGGAG
CCCAAAACAATTGACTGCCAAAAAACCAATTTAAAATGTCTAAACTGATCCCTCAGAGTG
ATAATATATATATATCATCAATGTATGAATCAGGCCACTACTTTTTAACATCACAAGACA
TCACCAGGATCCATAAACAACAATCACCAAACATATACAGAATCTTCAGTTCAGGTAAGA
GTTTGTTAAGAGTTCCATAACAAATAGTTGAGCCATCAAACAATGCTTTATAATGCATGT
CCATCATACTGCTCAGAGCCCAGTGCATAGCTTCATCCATGGAATCAGACAATAAAAGAG
CAAAAGTGAAGGAAGAAAATCAACAAACAGTAGAATACCAAACAGGAAGACCAGGAACAA
CATAATATCAGTAGCCCTCAGGGATTATGCTTATGATTTTCATCAAGGAAGAAATCTCAG
GTCTCAAAGATGTGCCATCACAGGACTCACAGAACGGCACTGCAGAGAACACAACAAACT
AAAAAAGCCATAAAAAATTATGATAAGAACAGCAGGAGCAACTTTTGGAGAATGTTATTT
GCCACACCTCAGCAAGCAACTCAAGATCCACATAAAGGGAAGAACATTTGAAAAATTCAA
GCGCAATTAACATTCCACCAGAAATTCATTTTCTAAATTTACAGAATATGCCATGGGGAC
ATCAGAATTGCAGATTTTCACAGCATGGCACACAGAGTGTGCTAATCAGTCCCGAAAGAT
GGTGTGTTTTGTTCATGGTTTTCATCATTGTCCAGCCAATTCTATACATAGTAAACAACA
GAAGAAAAAAAAGGTTCTAGAGTATTCAGAAAAATTACATACTCAAGAAGAGAAGATGAA
GTTCAATTTGGCCTCAGAATTGCAGAAAGACAGCATGGGCGCACAGCGACCAATCAGTCC
CGAAAGATGGTATGATTAACTGGTTTTTCATCACCGGCCAAACAGAAACAAACACAAATA
AACAAATCTACAACACAAAACCTGCATTACTACAGAAAACAAAATCCGACATTACCCCGT
CAGACAACCAAGGAGGGATCTAGGCAGCAACTGCGATTGGTTGAGAAACAAGCCTTAAAC
CAAACATCACCTAGCTAGCATTAACACCAAACAACTAAAGGAAATATATTAGCAGCATTG
CATAAGACATCCAAGGAAGGATGAAACGGCACTAGCTCTCAAGCCTGGCAGGGCGAAGGA
TCTTGATTTTATAATCATTTGCAATGCAGCAGCATTTTCGATATACATAGTTATATTGAG
CTGGAAAATTAAAAAGGCTGAGACATCAAAGGAATTAGCTGCATCAGCTCCGCCTGGCAA
GGCGAAAGCTCCTAGGCAGCAACTGCAAATGTTTTGAGAAACAAGTCTTAAATTTATCAT
CATCACCTTATACTCAAGCAGCATATCAACTCAATTATATTATATTGGCCATTTAATCAC
AATAATAGGATCCACAGACTAACAGAATCAAGTTCCAGGTTCCTATCAATGAGTGAAAAG
TAATTGTTGGCCCAAATATAGATCCCCTGGTCAATGCTGGTAACTACCAGAGAAGGACCA
TTAGGCCCAAGTTAGATTACAGTACAAACAGCTGCTCCACAATGACAAACATAAAATCAC
TCGGCAAAAAAAAGGGGTTTCCAAGAGTAAAATGGGATACCGCAGCCAACAGAAAAATGT
TTTAAACTAATAAAAACCTCAGAAAGTTGCAGGAAGTGTCAATTGATGTACTCCACAGAT
AGCACAAAACTAGAAAATTAGAGAGGGATAAATATATGCAATGAGAACAATGTTGGCCAG
TTGTGTATCATCAGAAAATAAATTACTTCTCATTCACAGGATAAAAGCACTGTGTCAGAA
GGTGTCCTAAGATTGTTTCAAGGTCTCATCACCTGATACTGGAAAAGATCAATAAAAAAA
GGAGTTGTTGCCACAAACCGGCAGAGGACCAATAGTTGCCATTTTTTTGAAAGAAATCCA
ACTATTTTGAAAAGAAAAACATGGAACTTCAAAGTGATGGCTCGGTTCAGCGGGATAATC
GGCATACAAATCAATCCCAAAAGAGACGACCTGTGATTTGGTCTGTTGAGCTTGAATATT
TGCAAATCGTCACTGCCATCAGCATAAACCGCAAAAGAAGCAAATCCAAATTAAGCTCAA
AAATAATTTCAAATCGATACAAATCATCAGCAGCAAGAGCAAAACAACTGGCGGGCACGC
TATTGCTACACCGTTCAGCAAAGGATTCGTTCCGATCAGAACCGCAGCACACATCTATCG
TAGCCTAGAGACGATATAATAGCAAGTAGAAGCAGGTAAAAACATATTAACTGGACAAAG
CAGTGAGATTTCCATTACCAACACAACAGTCAATTACAGACACTTGATTAGGTCTTCTTC
TTAGCATGCATACGCGAACGGATCGAAAGCTACTGGTGAACAAACAAACAAACAAAAAAG
GAGGGGTGGCGCGAGACCGGCTGGATCTACTACTTCTCCGACGAGTTGGGGCCGCGCTTC
TTGCCGAAGCCGACGACGGCGGTGACGAAGCGGCGGTTGTACTGGATGCGCTTGTGGGCG
CGGCCGCGCGGCTGCTTCTTCTTGTCCTGCTTCGCCACCTTGGGCGTCTGGCCCCGCACC
TTCCCGGCACGCGCCAGCGATCCGTGCACCTTACCTGAAGGCAGCCAGGCACCGCCGCGT
CAGGACCGACAACCACGACGACAGTAGGTAGGGATCGAGGGGGGCCAAGATGGGGAGCTT
ACCCATGGCTGCTGCGGCGGTGGAGCGGAGGCGCTTCGGTCGGCGAGGTGAACGGAGGGC
GCTCTGGCGGCGGCGGCGGGTTGGAGATGGAGCCCTAGATGAAGGGTAGGAGAATTTATA
GGGGGGAGGGCTCCGTTGTTATGCGGGCCGTGGGCTGAGGGGTTTGTGGGAAATGGGCCG
GTGTTGGGCTTAGAGCCCAGGGCCCGTTAGAGGCCCGTAAAAGGCGTGGGGAGTGGAAAC
CTCTCTCTCTCCTCCTCCACCCCCGAGAGAACTGAACCCTCGGAGAAGCGGCGGCGGCGG
CGGCGGCGCGAGCAGAGGAGCGAGCTCACCGGCGGAGGAGGAGGGGAGAGGGGGCGAGAT
GCCGCGGCCGGAGGTGCAGGCGCCGC