Contig Data
morexGenes
Links



Map Locations of contig_158683 (4431 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_158683

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19854 12 2723 bp MLOC_19854.5 Available Available LOC_Os05g05270.1, FRAME:+1, EVALUE:0.0, 13105.m00546 protein sucrose-phosphatase, putative, expressed





CDS Structure of MLOC_19854






Contig Sequence (4431 bp)

>contig_158683 4431 assembly3_WGSMorex_rbca.fasta
TCAAATAGCTTTAACTTTCTCTCAAATGAAACAAATATTTAAACTGATGTGTCCAATTTT
ACAATGAGCTAACGAGGAGCCACTCACCAAGTTCGATTCAAAGTCAAACAAATCAGCCGT
AAAACAATTAACAACATTACCGCAATGTTTGAACCAATTAAGAAAGGTTGCTGAAGAATT
GGCTATGGCTGTACATCGAGCCAAAATGAAAAGCCACACCATCGTTCGGCGGTCACCTGC
GATTTCCTGTCGTTTTTTCTGTTTTTTCCGCCACATACTTTTGGTTGACAGTAAAATACG
CGAGGCGTGAAAAATTCCTGCTTTTATCCTTACAAAAATTGATCCAGCGTATCATGGAGC
CATTTTTTCTATTGTTGTAGTCCTGTCGAGACCCTGTTTCTTTGTTGTGCTCTGTCAGAA
AGGTGTTCCCCCAGGGATTTCATCAACGGGAAAAAGCAGCAAGCAAAAGTCATCACAAGC
GCTCAAACGGAAGCTTCGCTGCACCCGCGTTCCACGTTCCACATTCCACACTCCACTTGT
GCGCACGCACTCCTCCGGGTCTTGGCTTGGTCGTCGTCATCCGCATCTCTATTCTCTCCA
CCCCGCCGCCTCACATCCTCCCCGGCTCCTCCTCCTCCTCGCCGGGCCGGCGGCCGCACG
GCGCTCAGGCGAGGCAGGAGCTACTGTACCTAGCTACAACTCATCCGCGCCCGAGCGCCA
CCCTCGCCACCTTGTACGTTCCTCCTCCTCCTCCTCCCCGAAACCATCATGCATTCAAGG
TGTTTGGTCGGCGGACCATACATGCTCCCGTGCTTCTGTCGAGTACGTGCGTTGTACTTT
TACTGTTGTACATTTCCCTGCGCCAAATCTGATTGATGTAAACCGTGCTAGATGATTGGC
TGGACTCCCTATCCACAACGATTTCTCCTGGAAAATACTTCTCATTAGCAAAGTCACGCT
CTTGCTTGTTTTCTTGTGTGGATAAACCGTGGATGTTTGGGTCCCCTGTCTTGCTCTTAT
TTCTTGTTTGCCGTAGTTGTTTAAGTGATCCGCAGCCATTATTTTCTCGTGTATACGAAT
AAGAAAGACCTTACCGACGGATGACCGATGAAATAGTTTATTTAGTTTAGTTTTAAAATA
AAAGCAGGAGAAATGCGTGTCCTGCTTGCCTTGGTTCGCTGTCTCCTGTGCAATAGTTTT
AAAATTTATCTGGAGCTATTATTTCCTTCTACAAAAAATAAAGACCCCACCAGCTGATGA
CCAAGGGATAGTATAAAAGCAGGAGAGATACGTATTGTTGTATCAGAGAAGTGTCCAGGC
AGACGCATCAAACATCGCAGCAGCCTCTGCAGCACTATTGCTCTGCAGGGCCTTATTCAG
CTTCTGCGCCGCAACGAAGAATGGATAGGCTCGATGGCTCTGCGCGCCTTATGATCGTTT
CGGATCTTGACCAGACGATGGTGGGTACCCCAGTTCGATCCTTTGGTTTATCCAGAAAGA
ACTAACTCACGCTGTTGTGTGTCTGAACAATGTTTGACTTTTTGGATTGTGCACTTGCAG
GTTGATCACAGTGATCCGGAGAGCTCGGCCATGCTCCGTTTCGAGGCGCTCTGGGAGTCT
GAGTACTCCCAGGATTCTCTGCTGGTGTTCTCGACTGGAAGAACGCCGGTCAGTTACAAG
GGTCTGAGGAAAATAAAGCCTTTGCTCACACCGGACATCACCATCATGTCTGTGGGCACT
GTGATAGCATATGGCCAGGAGATGACTCCTGATGTTGGCTGGGAGGAATTTCTGAATAAC
AAGTGGGATAGGGATATTGTTGTTCAGGAGACAGCTACGTTCCCTCAGCTAAAGCCCCAG
GCACGCCCAATGAGTTGCCTGTCTACTTTTTCCTGGGTTTTTCAATTTTTACTAGCTGAA
CTAAGGTATTTGTAGTACTTTGGCTTTGTGTGGTGCAGCCAGAGAGGAATCAGGGTCCTC
ATAAGGTCAGCTTTTTCGTCGACAAGCAGGATGCTCAGGAAGTGATTAATTCCCTCCCTC
AGAAATTGGAGCAGCTTGGGGTAAGACAAGGCAGGCCTTGGTGACCTTCTCTTTCTCTAT
TCTTCTTTTTGACAGGACTTTGTTATTGCTTAGCGGTGTTTTATGACTTCATCGCTTTCT
TTCTGTGATCAGTTAGATGTGAAGATAATCTATAGTAGCGGAGAGGCACTGGATGTATTG
CCACAAGGTGCGGGGAAAGGGCAAGCTCTTATATATTTACTCGAGAAGTTCAATTTGTGT
GGAAAACCACCGAACAATGTTCTTGTGTGTGGTGACTCTGGCAATGATGCAGATTTATTC
AGTGTTCCATCTGCCTATGGTGTCATGGTCAGTGTATAAGTTGCTTGGGTTCAGTGTAGT
TCATTGGTGACGATGATTACTCATATAAGCTTATTACAGAGTTTTGGAATCATATTCAGG
TTAGCAATGCCCAAGAGGAGCTTCTTGAGTGGTATGAAGAGAACGGAAAAGATAATCTTA
AGTTGCTTTATGCAACTGAGAGATGCGCTTCCGGTATCATGCAAGCTATCGGGCACTTCA
AACTAGGGCCTAGTTTTTCTGCAAGAGATCTTGAATTCCCATATCCGAAGGTAGACACCG
TCAAGCCTGCAGATGTAGTGGTGAAGTTCTATGTTCTTTACGAGAAATGGCGGAGGGGTG
ACGTTCAGAAGTCTCCATCAGTTATACAATACTTGAAAAGCATTACTGTAAGTACATTTC
CTTGTCGAACTCTTAGATTAACCCGTTTAATGTTTGTTCATACCATTTTCTCTTTAATAT
GCCATTTCTTTTGTACACAATTCCTTTTAATATTACTGATCCCAATACTGCACGTTCGAA
TTGGGATCTCGATCCCATTTATGATTCCCGAGGAGCAAATTTTGGTTGTTTCTTGAGCTT
ACTTTAGATCAATCGTCTATTTTGGATAGCACCAGAATGGCACACTGATACATCCTTGTG
GAATGGAGCGGTCACTTCATGCGTCCGTTGATGCACTGAGTTCATGCTATGGTGACAAAC
AAGGCCAAAAGTTCCGAGCGTGGGTGGACCGACTTGTTACATCGCCGATCGGTACAAGTA
ACTGGTTGGTGAGGTTTGACAACTGGGAAATGGAAGGTATACTCGAAGAACTCTTCACAT
ACTGAAGTTATTCCACGCCATGAGTTATCAGTTCGTTCAAACCTTCTTGACATCATTTTT
AATTGTAACGAGCCCTCTCCATAATCTTGGGATGCGCCACAATTACTCGTCTTGTGTTAT
CTCATTGACTTGTGTGTTGATGTTAATGTTTCTGTCACACTTAGGTGATGTGCAATATTG
CTGCCGGACAACGCTTCTGCTGAATACAAAGGTAAATTCTTGCATTCCCCCTGAAATTCT
TGCGCACCCTGCAACTGTATAGAATCTTTTGCACACAGTTTATGCTGAACTACCTAACTG
CCTGAACTCGCAGTCTGGGAATCCAGAGGGCTTGGAACTGACACACATCCACAAGACCTG
GCTTGAAGGATACTTAGCTGGGAATGCTCATACCTTCATCTTATAGATCATTTAACCACT
CTCAATATATGCACGGACCCTCTGAAAGTCGGGATAGAATAACAAAGTTACTGTTTCTTG
TGTAAATGGATCTCTCGGCTGATTCAAACTACTGTACTGTTCTGATGCTCCCAGGAGTTG
ATCTTCATGTTGATCTCATGCACTAATAAGAATTGTTCAATGATTCTATCTCATGAACTT
AATGAGATCCATAAATTAAGTGAAAGTTCTTACTGCACCAGAATGTTGTCATTACAGAGA
ATCATTCTCAATGTACTTGATGCCCAACTGGTGCATCTTGGGATAGAACCTTGCCCATGA
CAGTTGAAGCTGTTAAACTGTTCCTGAGAAATAACTCCAATGTTTCCTTCGGTTACCGAG
GTTGAATTTTTTGTCTTATTATTTGCTACCAAGAGGTACATGTAGAGAATGGTTATTAAC
TTATCTTTCCCTTATCTTTATATATATATATATATATATATATATATATATAATTTATAT
ATCTCCCCTAATAAAAAGCCCGCAGTGCTTCTGCCGTACATTGCCGTTTTTTTTTTGCAA
AAACACCTCCCGCTTTTCCGGTATTCAACCCGCAGTCCGTTTTTAAGTCAAAAAAGAATC
GGTTTTGCATTTTGCAGAAAACCCCCTAATGTTTCAGGTAATCAACCCGCAGTCCGGATT
TAAGTCAGAAAATGAATCATTTTTTTGCAATTTTTCAAAAACACCTTGATGTTTGAGGTA
ATCAACCCGCCCTCCGTATTTTAAGAAAAAACCCTAACTTTTCAGTTAATCAATCCACAT
TTTATCTAAAACAAAATTANNNNTATCTTTTAAACCGTAACTCCGATTTTA