Contig Data
morexGenes
Links



Map Locations of contig_158661 (4082 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_158661

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19817 5 2011 bp AK357861 Available Available None





CDS Structure of MLOC_19817






Contig Sequence (4082 bp)

>contig_158661 4082 assembly3_WGSMorex_rbca.fasta
ATTTAGGAACGAAGGGAGTACATAGTCCATAGTAAAATCTCTAAAAGGCCTTATATTTAG
GAACGGAGGGAGTAATATTTTGAAGTAAGGATGTGAGGGTGAACTCCTATATATTGCTTA
TTTCTATTCAATAGAAAACAATTCATCGTCGCTAGTCAGGTTAGGCTATCTGTCTTTCAG
CCAGACCACGTTATCCAGACTGATCAAACTCAACTAATTCGGGACAGAGGTATACATGGA
GCGGCTCAATGGCGTATACGGATAGACTGATAGAGGCATGCAAAATTGCTACATTCCCAA
AATTAGGAAACCCCAGTTTGATCAACGGAGATATGTACATCAGGCAACATTTCATCCGAC
CAAAATAGAACTACCTACATTTTTTTTTTTGCTTCAGGCATGCTGTGACAAAAAATGCTT
TCAAGAATATTTTGGGCCTGTTCAGTCAGCCCAATGTCGATTCCATGCCGTGGCAAAATG
ACATGAGCAGGGACATGAGCAGAGGAACAGTTCTTCAGTCATTCAGAGACTACTGGATGC
TTTCCCTCACTCCAGCAGCAGCTGTTCTAACTCATCAAAGGCGTCGGTTTCATTTTCGTC
ATAGAATTCTCCAGATTCGTCGTTGTCAACCACCACCATTTCATCATGAGGAGATACACC
TGTTTTCTGGTAGAACTCTTCCTTCTGGGCATCCCACTCTTTGACGATTTCCTCTACTTT
GTCACCCAGCAGTTTGTCATTCTGAAGGATGTGCTTGGCATCTTCCACATCAACAGTTTG
GCTTGCCTCTGCCAAGGGTAGCGATAGGGTCAATGACAGTTCCAATGCTACAAAAAATAC
AGGTAGTGTAAGAAGATGATGAGAAGAGATAAGCACCTGCAAAAGCTGATTCTTTGGCTT
TAGCGTAGTCCATTGACAATTTCTTGATGCTGTCAAGTTCAAACTCCACTCCCTAGATGC
AGATTGATGTGTCAGCAACAGAAGAGATTATGAGTACCATTGATACCAAAAAAAAAAAAT
GATTGCCTCATCTTGATATTGTTTCTTATATCGATAATGCCAGCACTACACAGCATAGCA
GTTCTTTATTAAAACCATTAACTGGAACCGTTACAGGCTACGTCAATCACTAACATTGGC
AGACTGAAGGGGGGTAGGCTGTGGAGTGGATAAAATAAATGATAACGTCAACCCTAATGG
TGATGCAATGGAGTGTGTTAAAAATGAATCTAAAAAGAGGCCATGAACGGAAACAAACTA
AACTTACCAAATCTGTGTGCGTATAACTCCCTATTTGAGTATTTGCAAACAACCTGGAAC
ATTAAAAAAATATCAGAATATTAGTAAATAATCGGTAATGTGTTCTTGTTTGCATACAGA
GAATAAAACGAAGGGAAGAGCTTACTACCCTGCAAGAAGAGAACACAAATGCTAATGATG
AACATCAGACGAGACAGATGGTAAAGAAGAAAATCCACATACTTGTCACAGGCAAATTCC
ACCCGTTTATTCTGGGATGCATTCATTTCATCAACCTCCTTTGCCACAATGTCACCAAGC
AAATTTATGAACCCAAACAGAAACATGCCTTTATCTAGCATCCTTTTGACAAGTGCTGGT
ACAAGACCAAGCCCGTTCTGCTTAGCCTCAATGACAAAGTCTTTGAGTTTCTTGGACTCC
TCTGTTGCAATCACATATTCAGGGAATTAATCTTCCCATTGCAGTAAGACGTAAATCAGT
GACTATATACCTTACCAAGAGACAGATAAATTTTGAAGTGTGGCTTGTATGGTTGACACT
CATAAAGGCAGTAAAGGCAGTAAAGCCCAGGCAACCTCTGAAGTAGAGAACTTTGGGAAG
TCATATGGCCTACATATATAGACAAGAAAAAGAAAATACATCACCAGTGCTGTAAGAAAG
ATTGTTGTAGGTAAAGTGGCAATTACAGGGAAACCATAGCCTACCAATACAATGCAAAAA
GAGGGATTGCATAAAAACGCCCGAGTTCGTCTTGGGCCTGCCTTCATAGATATAAGAAAA
CTTCTTGGCCATCCACACTCTCTTGAAATCAGTGAATGACGTGCAATTTTCCTGCCAAAC
AGAAGCACATGGATGCTACTTATTTAACATGTATATGAGCATGGCACACCTTGACTAACT
GCATGACAGAAAAAAGAAATCACCTTGGTATAATCATCTAGTAACTCGTCAATATCCATC
TTGAAAGGGGCGAGATCCATACTTAAAGTCAATGGCAAACGTGAACCTGAATCCACAAAC
AACTACTCATCAACAATAAAATAAACAACTGCTCACTTCAATCAGAAATGTAATATTGAA
ACGGGACTTTTGAGCTTGGTTTTGCAGTCCACCTTATTTTTTCTACGGACTGCCACTACA
TCACCTCCATATCAATTTGGCGAAATCATCCACTTTTTTTGGCATTGCCGTTGCTTTCCA
AATGCACTTAGTCACTCTTAATTATCAGCGTAACAGTTAGTTAAATGCATCTTTCCTGAG
CTGTAACGGCAGCAATTTACTAAAACTAGTAAGCAAGCATTCATCGCCAAACTAAATAGA
TTACAGTGCACAACCAAGTAAAACCACAATCTGACCGTGAATCTAGAATAATCTCCACAA
AACTCGGCTATTCTATTAGTCCCGAAGGAAGTGATGACAAAGCATTCATGCTGCAGGACC
GGAGGAAAAATAGACTCGTGTGTATAAACTGGTAGCAAATCGATCCTACTGACCACTGAC
CAGAGAGACCTCAGGATTGCCTAATAAGTGAATTCAAGCAGAGATGCTAAGCTGTTGACC
GAGTAGTTAGGGAGGAAAACCTACACCGTGAAAGAATCGGGGAGAGACTCACCGGAGAAG
AACACACTGCCGAGGTGGGCGACCGGAGTTTAGCAAGAACACAAAATTACGGCAGTAGGC
ACGGGGCTGCAGGAGGTAGGGAAGGAGAGGGCTGGAGGCTTCGCGGCGGTAGGATGCAGG
GGCGGAGGAGCGTTGGAGCAACGGCCGCCGCGACACAATGAGGAGGGGGCGGCGTGAGCT
GGATGCGGGGCGGCCTAGGGTGGATCAGGAGACGCGCTAGAGGGGCGGAGCTAGCATCTG
ACATCAGGGTGGTCCGCTCCCAAATTTTTTTTGACAAGCAATATGACATGCGAACGTTCT
AACCGATTATCAATATCATAAAGAAAGAGATTAACATGGTCTTACAAACGCACTAAAATT
CTTAATTAAATCTTAGTGCAAAAATTATCTATAGGCATAGTGCAAAAAATCAAACCCTAA
GTCAGAAATTAGGGTATTTCAGTACCTTTAATTGGGGTATTATGGGGGCTGGTGTGGTGA
CTGAGCGGCAGTGGCTACCGCCTGATCTGCAGGGGGGTGAGGGCAGGGGCGCGACCGGAC
CAGAGGGCGAGCGGGAAGGAGAGGCGGGACCACGGGAGCCTCCTGGGTGCCAGGTGGCTG
GGCTCCGGGATCCGGTCAGCGGCGGGCGGCAGGCGGCGAGGTTGCAAGGGACGGCGATGG
TGAGGTGGCTGAGCATAGAGGTCAACCAGCGTCGTGCGAGGGCATAGCCGCGTGGGGACG
AAGGGCTCTGCTCGATGTGGGCGTGGCTACGTGGGTCAACCAAACTTGGCAAAATACCAC
TATGAAAATCAAACATGTCATTATGTCAATGTAGCACTACTTTCAGTTTTCTCTAGCCAA
AATACCATTAGTGACTAAATAAGACTAACACCATCCAAAGAAGACTTCTATGCCCTTACC
TCTTCACAGCCCAAGTATACATTTCAGCAAACAAAAAGCAGCTATAGTGCAACATTTTAA
CAGCCAATTGACATGAAAACACCACCAACTCAACATAATCTTACTTTGCATCATCCAACA
ACAATATAGCCCCTTTTTGTACACTCGTTTGCCGTCTACAATCGTCAAGTAAGACTGAAC
ATCTATTTCTACCTTGTAATTGCCCATCGAATCGTTTATGAAACACACAAACACAGCAAA
TTCTAAATTTGCTGCACTTGAAATGAGAAAATTCATGGAAACCGGGGGGGGGGGGGGGGG
GG