Contig Data
morexGenes
Links



Map Locations of contig_1586136 (3249 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1586136

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19711 2 1880 bp MLOC_19711.2 Available Available LOC_Os07g10420.1, FRAME:-3, EVALUE:4e-49, 13107.m01058 protein expressed protein





CDS Structure of MLOC_19711






Contig Sequence (3249 bp)

>contig_1586136 3249 assembly3_WGSMorex_rbca.fasta
AAAAAAATATACACATGTGAAAAAGCAAAAAGAAAATAAAAAAATAAAAATAAAAACAGA
GCAGAGGGTGCGCGCGTGCGCAACTGCGCTAATGGGCCCGGCCCAATTCAGCAAATCCCG
GATTTAAAATAGACCAGGATCAGTGAGTTCGGTGTGCCGATTTTAGGGATTCAAAGTTCA
TGATTTGATTTAGCTTTTCTCTATAACTTCAAGGTTTGTTTTGGACTTTTTTCGTATATA
AAGCATCTCGATTGTACCGTGTTAAGAAAGAAAGAGCCTCCCCGCGACAGCCTGTTCCAG
CACAACGACATGGTCGTTATCCCTTATCTATGAACTTAATAACAAATCTATTAATGAATC
CATCCTCATCTGCATACACATACAGCCGGCCCGGCCACGGTCCCAATTATTTACACCCAG
TATATCGTGCATTATGTACAAACACGACACGTGATCTATGTTATACGTACATGACAACCA
CTACCAAGGCTGCTGATTTGCTATAACGCATGAGCTAGCTTTTTCTTCATCAGATGTACG
TAGTTGAATCCAGCAGCTTGTGCTTGATCCGAGAGTTGAATCGCGGGCGGGTGGATCAGA
AGCCGTCGTAGAAGCCACCGAACGATATGTTGGCCCTTGTGGACGCGCCTGCCCCCATCA
TAGATGACATGGCCTGGTTCAGCCTCGATGTCTGCTGCACCACCTGCTGAATTCTCTGCA
CATCCACAGATCAACAGCATATGTATTACTTCAGCCAGTCTTCTCTTGGACAAATAATAT
TTCAAGATTCAGTTCCACAAGAAGCGGATGGCGGTCAAATCCGGGAAGAAAACTGCGGAC
TGCGGTGTTGGAATGGGTCCAATTAGGCCGTGCACCATGCGTCTGTGACAGACTTCGTCA
ATCGGATATCTGTCGGCTCAATCTACTGAAGGTGCTCATAGTCATAGAGACAGGGAGTTC
GTGTATGTGAGTGTGTACGGTGTTTCTCGGGAGAAAAAAAGGCATAGTTGATTGATATTG
TAATTGATTTAAGTTGAGTTATTACTAATAGGAAAAGGATTCTGATGCTCTGGATCGGAT
TAGGTGGCGACAGAGTCAGCAAACCTTATCATCGCCAAGGAACTGCAGCTGGATCTTCTG
CTGCTGCTGATGCTGGTGCTGCTTGTGGTGCTGCAGCCTGCCGCCGACGAGGAACACGCA
GACGGTGGCCGCCGCCACCCCGAACGAGCAAAGCGCCCCGACCGCGTTCACGCGCAGCTT
CCCCACGCTGAACACCACGCACTCCGGCGGCGCGCCGTCCTCCTCCTTCTTGCCCTCTTC
CTCCTCTCCCGCGGCGAACTCGTGAGGAGGAAGCGCTGATTCCACTGCCTCTGCCGCAGC
CATCTGCTTGCCATCGTCGTCCACCTCCTTGGCGTCGTCACAGGCCTGGAACTTGTCCTG
CCCGTCGCCGTCAGAGACTAGCAGCTCCGTCACCGTGGGTTCTTCATCTTTACCCTCTTT
AGTTGATCTGGGCTCGGCCGGCACGACGTCGACGCCGATGTCCTTACACTCGTCAACATT
ACCAGCGTCCACTTGTGACGGGGGAGGCAGGATCGGTTCCTCGGTTTCGTGATCTGGAGT
ACGCACGCAATCAATTACAGTTACAATTACAAATACAGGGATTGGAACATGAGTGGAAAC
CGAAGTAAAAAAAATCGTGATCAAGAGCGAGCTTACCGGCAAGAACCTCGCCGCTGCCGT
GGGCACGGGATGCAGCCCTGCTCTCGGCGTAGAAGCTCCTGTGTTCGTCAGGCAGCACCT
CCCAGTCCCACACGTCCTGGACGGAAGGAGCGCCTCCTCCCTCCATGGCAGACAAATCGA
CGGACGCAACCGCAAAGGCTAGAGGATCAAACCTGAACCTGGTTGCTTGCTGCTGCTGGA
CGGATCAACTATTGGCAGGGGAGCAAGGAGCCAGAGGGAGAAAGCTATATATGGGTGGGC
ACTCACACACACACATGGGCATGGGCACATCAGCATCAAGGAGCCAGCCAGCTCCTTGCA
CCAAGGGAGAAGGCAGAGGAGGGCTTGTGTGTGGGCTTATCCTTCCTGCTAGGGGACAAG
GGTGGGGGCCTACCACCCGGGAAGGAGAGGGTTTCTACATCGTTCTAGCAAGTTGCCGTG
CATTATTCACGATAGAAATGCTTGGGACACGAGGACTTTTCAGATTTCTGCCATGGTTGA
AATGCTTATGTGTGGCTACTGTAAAACCGGTGAAACGTTTTTTGGGAATTTTGGGCGATT
AACATGTGTCGCCTCTCTCAAAAAGCTTGCAAATTGACGTGTATCCTGTTAACGTTCCTG
GCAATAGAAAATTCAATGACACTCCCGGCACCGGCAGGGCAGAGGGTGATGCTGATTCTT
GGGAAAAGTTCAAAATACGGGTCAATTTGGTACGACAGAAAGCAAGGCGTGCGTAGCTTG
CAGGTTAGATTACATTACATTGCATTACAGACGTATTCGACGTTACGACACTACATACCG
TGATTCCACTGCAGGGCTACAAATGAAATGCTCCACTAATTATCAATGACGCGGAAATGA
ATTAGGTCAGAAGCTTCCGCGGGAAATCCACATCAAGAGGTTGAGATGTGACCCAAGATA
GATGGCGATCGATGGATAATCACGCAGGAGCAGAAACCATATAGGGGCAGTAATTCAGAA
CGCACGCAAACGCAGAGAGGAGTGTGAAAAAATTATCAGCTCGTCAGCAGGGCCTTTCAT
CATGACAAGTTTATTTAGAGACTGTTCGGACTCTCTCCGTTCCGCAACTCCACATCAGAG
CGGAGTGACACCTAGTTATATTCTGAGGAATTGCTAACAGGACGCTCCTCGCGCTCTGCT
CCGTGGCGGGCTGCCGAACAGGGGCTTAATGAGCCATATAGGATACTAAATTAACAAATT
AAACCATCAACACAAGCTTAGCAAAATCACAAATAAGGTTGATAATTGAAAAGGATGCAA
ACAGCATTTACCAAAATCTTATCAGATCAAACTTAAAATAAGGCTTTGCCGGATTATTAA
GCATTCATTTAGTAACAAGTGCCTCTTCAATAAAGTTGAATTCATTAATAGATCATCCTG
TAAGGACATCTCGCCATGTCATCAGCCAACGCCTTAACATACAACTACTTCAATGAATTG
TATTTAGTTTGTTTAAAAAGATGTGAGGTAATAAATAAGGTGCTCTCTCATTCTACATTG
AAGCTTGTG