Contig Data
morexGenes
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Map Locations of contig_158609 (5642 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_158609

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19700 3 2036 bp MLOC_19700.3 Available Available LOC_Os03g64320.1, FRAME:-2, EVALUE:1e-158, 13103.m07146 protein expressed protein





CDS Structure of MLOC_19700






Contig Sequence (5642 bp)

>contig_158609 5642 assembly3_WGSMorex_rbca.fasta
TCCCATTGGCTGTGTTGAAAGGTATTCCATTCCGCTCATCAACATCAGCAGAACCTCGCT
CGGATAAAAGAATAGGATCATCCATATTTCTTGTGGTCTCTCTCCTCCTAGGTGGTGGTG
GTGGCTCTCTTTCACTGGCAAACATATCCGCGTCATTATTATCTCTTGTCTTGTCTTCAT
CTCTGAGCAAGAAGTTCTGGAACGCATTCCAGTTTCCTTGATCTCCATCTTGCTGCCCAT
TAGACGTTCCATCCTTGGTGTACTCATCTTCAGACTCGGTGGTTTTCTTGCCCCCTTTTT
TCTTCGAACTCGAGCGCTTATGATTCCTCTTGCTTGATTTTCTGTGTGAATCATCACTAT
CCTCTGATGACATATCCGAGCCTGAGTGTGACTCGCTCTCTGATGACCTATGCTTCTTCT
TTGATGTTACATTTACATTGCGTATGACAATTACATTCTTCTTGCCCGAGCGCTTGCCTT
TTTTACTGGACTTGCGGCCATGAGAACTCTCCCTCTCTGAACCGCTTTGGTCGTCACTTT
CATCATCGGAGTTGTCGAAGTCCTTGCTATCTGCTGAGTGCTTCCTTGATGGTCTCCTTT
CCGAGTGGTTGTACCTATGATCATCTGTTGGGGGATAGGGAGGAGGGTAATATGGGTTCG
CCCCAGGGTAGTATGGTGGCATGCCTTGCATGGGGTAAGGAGGATGCATTGCCCATGGTG
GATATCCTGATTGATATGGACCATGATGGTAATCATGGGGAGCTCCTGGGTGCTGATGTG
TCCTGTGATCTGTCAAGAAATACAAAAAGTATTCATCAGATCCAAGTTCCCTCTCACAGT
AAAACAAAGGAGAAAAACAAATTAATTGTGCATGCAGATTGTACAAATTCGATATCGCTG
CACAATTACCAGGCAAAAGGGCCATTTCAAATTGGAAGGAAATTTGCCATGTAAAAATAA
ACAGAAGGCGGCTGTATATTAGGAATAATTTGGATCACAATTTTTAGATAACAAAAACTT
AAAATAAAATGTGGCAGTATGGAAGAAAAAAGTGAACAATCATGCAGATAACAAAATCCG
CTTATTAACTACAAAGATTAATACTAAACAAAGTGAGCATTTGGACAGTTAGTTAAATCA
TGGCACCAACATACCAGCTTTAGCAGCATCTTCGCCATTTGTATCTCCATTAGAGACAGA
CATTGTTTCCTTATCTCCCATAAACATAATCCCAGAAGCATTGAAGGGGGGAAATTCAGA
GCGTGCAGACATTGTTTCAGGTTCAACGTCAATCCACTGTCCAGTTTCATGTTTTTGCCT
CCACAAATCAATGAACTGTGTGCATGCCTTCCTATAAATTGATAGCGAACACCAACACAG
TTAGCGCTTATGCACTCCAAGAAATTACTTAGAGCTCACTGTTAAACACAGCAAGGAGAT
CAATCAATGGAGGTGTGTTCCAAGTACAGTAGTAAAGTAAGACATGGACCAAGTACAGTA
GTACTGCAATCGAACTGTGTGCATTATTTAGCATGATGTGTAAGCGCTAGTTGTGCATTG
CAATAACATTCAACAATCTGAAATGGCGTCGGAATTAGCATCAGAATGGAGTCGGCGCAA
ATTAATCATCAGCCTCAGGGTCACATTATCTACATGATACTACTTCGTTCATTACAAGGC
CATACTTACATCAAGCGTGCAGCACCAAAACGCTCTGCGAACGAGATCAAATATATCAGG
TTGTCTATATCAAACCCAGCAGCTACAGCACGTGCAAAAGCCATAGCCTGCTCTTTACGT
AAGACAGTTTTGCGAGTCTCCAGCACTCTGAGAAGCTGAACTCTGCAAAATATATATTTT
AATTAACACCTTACCAAGTTGCAGATAAATACTTCTTCCAAGAAAAAAAATCCAAAAAAT
AAGACACCATCCCAAAAGGTGGAGATAAAAGTAAACAAAGAGCTGAACTTTAGAATAGAA
TGAGTGTGAGCAATCGTTCATTAGATAAAGGCATATGTTACTCCACAAAAAAAAAATTAT
GACATTGCAGATTTTTCATATAAACAAGACAGAAATAAAACGTCTTGAAGGAAAACAGCA
TGGGGAAAAGGGGGCTTATGCATATAAATACTTTGAATGCTCCTCATGTACTCCGTCGTC
ATTCTGCAGTGGGGACGCTAGATGTGTGTCAGGCTGCCATTGATACAAGAACATCAGAGT
TACTTATGATACCCTTTTACCATGACACATTTATTATAGAAAAAAAATGCAGTTCTTATT
TATCCATACAACCTTACCTTGTACAGAACAAGTGCCTTATCACCATCAGTATTGTAACCT
GTCTTGCCACCTGTAAAGGGACATGTCAGGTAAATTTACCAACGGAAAAAGGGATGCAAA
ATCATGTTCCAGATCAGATCAATCTATCATGAAAATACATATATAATTCCCACTGAACTT
TTGTATGCAGTTGCGAATTGTCCTGAAAACTTGTGCACTTAATGATGGTTAGATCCATAT
TATAGTAGAATATTCAGCTTCCAATATAAGTTAGGTAAAAGAGAAGAGAATGCATAAAAA
CGACACATTGTCATTTCCCCTGTACAGCCAGCCACCCTAATAATACTTTTGAGGCGTCCA
CTATCATGCACCTAACTGGCTAGCTAACTCAACAGCTGTGACTGATGGTACACCGCACCA
AATTCTGTAACTCATAGATTCTAAAACAGCGGTGCCGTCGCCATACAAAAAGTTTCTGTG
GTACAACAAACTCAAAGCAGAGGATTTTCAGTTACGAATAAGCATTGCCGAAGATTTCTT
GGTAGATATTGTGCCGCAACACCAACATTCAGAAGTGAAATGGGTACTAGTATTGTACCT
TCCACACCGTCAATCGTTTTCCCATTATGGCCTTCTCCCTAACAAAGCCACACACAAAAA
GTCATCACTCTGCCATCAGTCTCAAGTACTCCATTACATATTACCATTCTGTACTTACAG
ATTTGAGTCCAAGATTTTCATTGCTCTGGACGGCGATGGCGTCCTCGAGCTGCAGTATCT
CGGACTCGATGGTTGTCACCCGCTCCAGGACCTCTGGCGTGCTCACGAACCGGACGAACC
TAATGCCGACAAGAAAGAAGCAACCATGCAAAATGAGCCACCACCAGCACCGACACCGCC
GCCGGCAAGGCAACCGGCAGACAGGCACGAGACGCCGACAGATAAACACGAGCCTAACCT
CTCGACGGTGCCCCTGGTGAACCATGGCGCGTCGGCGGCCGGATCCGGCTCGAGCAGGAT
GGTGTAGCCTCCCTTGGCAATCTGGTCCTGGGCGGCTTTGAGGTGGGCGACGAAGGGATT
CAGAAGGCCGGAGGCGATCTTCTCCTTCCTCCCATTCGCTATCACAATCAAATCACACCT
ATATATATATATACAAAACAAAACAAAACAAAACAAAAATGGGGAGAAGCATTAATAAAG
AATATTTGCTTCTTGCTGCTGCTGCCGCCGCCGACGACAGAGAAACGCACAAACACACAA
AGGGGGCTGCAGGTTGCAGTATGAATGGTATCTATCTCTTGGATCTACGACGGCAGTTAC
ATTTAGCACAAAGAGCGGAGCTTTGGTGGCGGCGCAGATCCGCATAGGATGGGAGGCTGA
GCTTGTTAGTTACCTGGTGCGGGTGGGGGTGAGCTGGAAGGCGGCGGAATCGAGGCGCGT
CTCCGGCCTCATCGCCGTCGGTGGTATTCTTGCCGTCTGCAGATCTTGCCCCCAGGCTGT
AAAGAAGAAATGCTGAAGAAGTGGGGATTTTCCCGGATGGGGAAGCTCGAACCCGGGATT
CAGAGGAAGAAGAAGAATCAAGAAGAGAGAGATACTCGGGATAAATGGGCAGCAGGTCTG
AGAGGGAGGGGTAAAATAAATAAATAAATAAATAAATACAATGAGGGAGGAGGAGGAAGA
GAGCAGAGCGGTGTGCTTCTTCTGCTCTCTTAGTGAGTTGAGTTGAGTGAGAGAGGGGAA
AGGAAAGGAAAGGAAGCTGCTTTTTTATTTGTTTGGTGTGCTTAGTTTAGTTGTGCAGTC
CATCTCCATCTCATCTCACAACTGGACTCGAAATGAGGATGCTAAGAGGATGTCTATCAG
ACCCGTATAAAGTCGATTCATAAAATTCGTTTGTAATTCGCGAAAAAACGGTTTTATGAA
CGGGCGCGGACGTAAACAAAGTTAGACTCCGTAAAACGAACTCATACAAAAAGGATATTC
ACAGAAGATGCTCTTTTACAGGTCAGCTATGCGGGATCTGCTCGGACGTCGTCGCATCGA
CCCGCAAACTGAAAACCCCCAATAAACGAATTTAACAGCGATTCCGATAAATGAGTTTAA
ATTAAAATAACATAAAACATACTTGACGCGCAAAATAAAAGCATAGTTTTAAAAGACAGA
CGCAAAAGGACGCAAAATAAAAGCATACTTCATGCATCTTGGTCGCTCTTCACTACGCAT
CATCGAGATCATCGCCACCCCAGAATACATCGTCGGCACTTGTTCCAACTCCAACACCAA
AATCATCGGCGATATTGGTTCCAATTTCCCGACGAGAAAACACTGTCATCATCGTAACAC
GCAACCATCATCCTCTTCAAGATGTCTCTCCTTGTCATATCAAGCTATTCTTTGCTGATG
TCGTCCATGTCATTGCGGTTCAATGTCATGATCCTATTCTCTTCGGCAAGAAGGTTGGAC
ATGACTTTGTTCTCAACAGCACGTGCTCTTCTCTTCTCAATGTCCTTGAGAATTTGCCAC
CTCTCTTGCTTCTCTCATGTCTTCTTTTCGGCCAACTCTATCTTTGTCTCTAAAGACTTC
GCTAGCATCAACCCATTTGATTGCACCATGACATCTATCTTATCCCGCAAGCTCGATGCT
TCGTGTTCCCTCTTGATCTTCTCATTTGTATTCTTGTCACCATCAGGCTTGTTCAAGTTT
CTTGGACGCGAAAAGCGGTCCACAATTGCGAAAAGCGAAGCAAGAACAAGGGAGGAAAGA
TGCATACCTTTCGGCCATTTCATCGAACACCTCGCCTGTGGTTGAAGCAGCGCCGTTGGA
AGGCATCATCGGCGAACATCTCACCGGGGCGGAGGGAGTGGATGAAGGCGCCAACCTTTT
CGTAGAAACCTTCTTCCCCTTCACGCCCGACACCTTGGTCATCTTCTCCATCGGCGGCCG
GTCAGATCGTGCAGTGGCGGCGACACCCGGCGCGCGTGCCTTTCTAGAGGGGCCAACTGG
ATTGTCGCCCTGCACGACAACGTTGCCCTACCGCTTGCGGGTAGATGTTTTGGTGCCTTG
GGCGACGGCGGGGGGCGACATGGCCGGCGACGAGATCCGCGGGAGGGGATTGCGCGTGCT
TGACCTCCAAGTTGACGTTGGACGGCTGGGAGGCTTCCATTGCGGCGAAGAATGGCGGGG
GAGATGGTTCGGAGCGTGCAGTGGCGGGGCAATGGCTGCCGAGGAGGGGGGCGGGGAACG
GCCGCACAAAAATTTCCCTCACGCCAAATCTCATTGTGGATAGGGGCGAGCTCGGGTCGG
CCTCCCACCCCATGAATGTGAAGGTTGAGGGCGAACTTTTGTCGCGCCCCGCAAAAAAAT
TA