Contig Data
morexGenes
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Map Locations of contig_158583 (6158 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_158583

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19653 3 1657 bp MLOC_19653.2 Available Available LOC_Os11g35020.2, FRAME:+1, EVALUE:3e-66, 13111.m09171 protein yippee zinc-binding protein, putative, expressed
MLOC_19654 3 3951 bp AK355680 Available Available None





CDS Structure of MLOC_19653






CDS Structure of MLOC_19654






Contig Sequence (6158 bp)

>contig_158583 6158 assembly3_WGSMorex_rbca.fasta
CGAGCTGGGAAGGCGAGGCAGTTTTGCCTCCCGCGCGATTTGGGAAGAGGAGTGCGGGTT
GGGAAGGGGTTTGAGGGTTCGACCTCTAATTTTTTTTTTACGGTTTTAAGGGTTTAAGGG
TTCTATTCTATGCCGTTTTTTTATAAAAACTGTAAAAAAAGCGGTTATTTTTAAGGGTTT
GAGGGTTTTACTAGAGATGCTCTTAGTTGCTCCATGTTCGTCTCAGTTGTCGAAAAAAGA
AAAAAGAAAAAACGCTCGTCTCTTCTCCTACTTGCATGTAGGAAAAAGAAAAAGAAAGGA
AAAGAAAAAGTCTGTGTTCTCCTTTCCCCCAAATCGATCGACGGACGGAAGAAACTCCCA
TGGCGATTTGGTCCTCCTAGCAAGCAAGCAAGCAGGTAGCTCTTCCTCCCGATTCCCCTT
CCTTCCTTCCTTCCTTCTCGTCCGCCCGGCCGGCCGCCTGCTACATCGACGGAGCCTTTC
TTCCACCGCCGGCCGCCGCATCATCTAATCTGCCGCCGCCGAGTGCCCAAGGAACAGGAA
GCACCGGGGCTCTTGGTCGGTCAGGGTCAGGGAGCAACCAAGGTATGCATGCTTGGCCTC
TTTCAGTCAGATCAGAGGCTTCTTCAGTTGGCCACCACCACTGATTCTCACCTCACCTCA
CCACAACAACATCTTCTGTTCATGCTCATAGGTTACTTACACTCATCTCCTCATGTACAG
CAAAAACAGCCTCTGGATATTTATTTTTATTTTTGTATCATCTGTTTATTAGTACTCTAC
TTCACAACCATCGAGAGGGCAAAGAAGACCCGATTCACAAATGTTCATGCTCATACGTTA
CTTACACTCATCTCCTCATGAATGAATCGTACTAATAAAATTGACTAAACAATGTGTTGG
GCGGTTAGATAGATTCAGACAAGTATCTGGCTAGGTGATTCTTGGATTCTCGCTTCAGAT
AACAGCCAATCAATGGCTATTCGTCATATTTAGCGTTCGGTCACCCCGCTGTATGCATCC
TGATCCTGCTGCTCTTGAGCACTTAGATATATACTTGTGTGGATTCCTACTTCGTTCGGT
TGAATCGGATTGGTTCATGTGTATGTAATGCAGGAGATATATAGATAGATAGATGGCGGA
ATTGGTCGGACCGCGGGTGTACAGCTGCTCCCACTGCCGGAACCACGTCTGCCTCCACGA
CGATATCATCTCCAAGGCCTTCCAGGTAGTTGAACAACTTCACCCACGGAAGGATTATTT
GTTTGTTTATTTGGTCAACAACTTACTTTGGCCCCCTGCCTTAGGTATCAACAAGATTGG
ACAGACAGACATACAGACAGACAGACCTTATAATCAATAAATAGGAACTTATTAAGGGTA
ATGTTGAACTGCTTGGGGGATGTCATGCTAAAACTACACCAGTATCACCTACGGAGTTTT
AACTAATTTATTTTTACAATCTGAGCAAGTTTCTGCAGCTGAGTTTAGCATTTGTGTTTC
TACACTTGTACATACCGGAGTTTCCTTCAGTTAACCAGAGAGAGAGACGCTGTGATCTTC
AGCACTTAGTCGTAGGAGCCTGTCACACGACCTCCATTCAGATGTCGAGACCTCGATATG
ATATGCCCTGATCTGTCCATCTCAATTTTGATTGTGTTTGGAGGATAAATACTAACACTC
TGCACTTCTGGCTGCTGTTCTAGGGGAGGAATGGCCGTGCGTTTCTCTTCTCCCACGCCA
TGAACGTTACCACGGGGGCCAAGGAGGACCGGCAGCTCATGACGGGGCTTCACACCGTCG
CCGACATCCATTGCCGTGACTGCCGTGAGGTGCTCGGATGGAAGTACGAGCGAGCCTACG
AGGAGTCCCAGAAGTACAAGGAGGGCAAGTTCATATTTGAAAAGGCCAAGATCGTGCAGG
AGAATTGGTAGCAAATAATTGGAAGAAAGATTCAACCAATCCAAGATCGTGCCAGACAGA
ATGCTCTCTTTATGATGGATCCTCCATGCCTTTGTACATAGCAGCAGTCCGTTTTCTTCT
TTTCAAAACTAGCAGTCTGTTGGTCTTATTTCCATGCCATTTGCAATTTCTTCTTTGAAA
TGGTTTGTGATTTGTTGTGTGGAGAGACAGAATTATCATGTTCATTTGTGTTGGAACCAT
TTTCTCATTGATCATAGATAAGATCGAAGGTTTGATAATGTGTGGTTTTATTTCCCCAAT
TGTTGTTCAGAATAGCTGCATTTTCTTGTCAATCAACAAACAGATGGCTCATGACAAGCA
ACACAAACACATTCATTTGATTTGGCATCAAATTCAGATATATCAAAAGAAATAAAAATA
TCACACTCATCACTCTCCGCATATTGATCAGGTACATCTGTAGTTCAGTTCTCTTTCTCT
GTGTACAGGGAAGAAGAAAAATGGTACAGGTTGAGTCCTTGGACCAAAACCCTAATCAAT
TCAATCAAGACTTACTGCTTCTACAACCTACAAAATTTTATCCCCGCCATGGCGACAACA
TAAGCCGCTCAGTGTTGCAGCAAACCAGTCAAGCCGGCTCAACCATATCCATGTCGACGA
CGCAGGACAACAGCAGACAATGATAAGCTCTGTATCCCCTTGTACATGAGCTCCTGTGAT
GGAACCAAACCACGCAGAAGATGTCACAAGTACAGGGACGCAGCGAACACAATGTCCCTC
TTAATCTTGCTGACCGCCTCCTCGAGCTTGGCCTCAAGCTGGGTCTCACCGATCGACTGG
GACGCCAGAATCAGCTGCTGTAGGACCTCCTCCAGCCGCCTGATGGCCCTGATCAGGCTG
CCTTCAAACACCTGTGTCATCTCCATGATCTGGTGGAACTTGGACCCTCTGGCCCACGAG
TACACGGCCTCCATCACATCAGGGCGGAAGGAGTTCACGAAACTCTCAACATCGATCTGG
ATCTATCATCAGCAATGCCATAACAGAAACAAGTTTCAGCAACTGGGATGCAATTCTGAA
GCATCAAAACAGCACAAGTTATGATTTTCTGGCACTGGCATTATTGAGTACCTTGCATTC
AAGCTGGAGGTTCGCGACCCTTCGTGCCGTCTCTTGCAGCTGGTAGAAGAGCAGGTCGAG
CTCCTCCCTTGGCTTTGGGGCGTCCTGAAGCTTTTCCTGCCAAACAAAGCAAGAAAGCAG
AGCCACCATCTGCTCCACAGTAGCATCCTTCAAAGTACCACTGAACATAAGCTCCGTCAA
TGTCAGTTCGTCGGCTGAGCTGATCTCACATGCTACTTTGCCCTTTATTTCAACTACATC
CTCATTGGTGATGTATCTGAAAGAAACAAGATACCCAAATAAGAATTCATGAAACAAAAT
AAAATATAGATTGATGCAACAGGCAAGACGTGAACTTTCATATAATCTCGATACAACCAA
ATTGCACTTTACGATGAATATCTATGAGATACATCTCTAATGTTCAAACAAGAGGTTAGT
ATTTAACTCTAACAGTCAATGATAGTTCAGTTTAGCATGATTTAGGTGTCAGATGATGCA
TTACCCCAGCCTACGAAGAACTCGTTTTCGTGCCTTGAGCTCGTCCTTAAAGGCTAGAGA
AGTCGAGGCCTGCATTGTTTTCTTTATGGACTTTATTTTGGCTTTTATTTCTTGCTTAGC
ATGCAAGACCTTCAGCTTCTGTTGGATATGGGGTGCATTACGGATGTCATGCTTCTCAAA
TAAGCTCTCCAGAGCCTCTATTCTTCTGGTAGCTTTCCGGTAGGAGCTAGACTTTACCTG
AAAGGAAAAAAAATATTAGGGCTAAATAAGTAGAGGAAACCTCACCATATGACATGCATT
AGTTTTCCTTACTTCCATATCTTCTTCTGGATCCAATAAAGGAACCCCATCTTTAGCAAA
CCTTGAAAGCACTTCTTCAATTTTCCTCAAGGTGTTTTCTCGAGCTTCTACAGGCAAAAG
ATCCTTGGGTATGTACATCCGGACACTGCTTAGTCCATCAATCTGTTTATTCAGTTCAAT
TTAGGATTAGAGTAAGAAGACAAACAGCTTTGCAATGTGATAAAAATGGTTAGAAGTGGA
ACATAGCACGTTAACTGGTGAAATGGGAGAAGTAAATTACCTGAGAAAGTGGCAATGAAA
TAACAACCGGTTCTCCACGGGATTTGAGAGGAATAACCTTCATTGCCTTCTTTCCATTTA
CGTCCTTAATTACAGAACATCTGGTGAGGACATCAACAGTGTAATCACAATCCTCGGGCT
TTCTTTCTGTAAGAACAAAAACCAGAAGTCAGCAGAGTCAAAATAGCTACAAACAGTACC
TCCCCCTATTAAATGCTGTAAAGCAATGACCATAAAACGTTAGGATCACATTGTAACATA
ACTGCTTCATCTTTTTAAAACATAAGAGGGTAGGAACGAGGTAGTCTGAAACAAACAACC
TTAAACCATTGTGTGAGTTATGAATCAAAGAAGGAAACCTGTGAAGGAGTCATTCCTTCA
ATTGACACAACAAAACAGGTTAATGTAGGTGAGCTTACTGACCATTCACACAGAGATTGC
TGCCATGATGGCTGCAGTGTGTAACTGGCTAATTAGCCACCAAACCCATACAGGCTTGAT
ATTTCCCACATAGGGTATGTCATAAAGTTTCTTACAAAGGGAGATTGTCAATTCCATAAA
CTGAAGGTGCACAATCTTTAGATTGCTAACTGGCCGGAACAAAGTTGCAAAATTATGGTC
ACAGCTGAATGGTGGTAACTGAAGAGTGAACCTCATGAATAAAATAGCAAAACTAACAGA
GTGTATGAATGTTACCTTCAGCATTGGTTTTCACCTTTTCAAAATTTATTATAATTCCCC
ATGACACACTTTCGTCAATAGAGAAGGTGGACTCATCTGTAGTGTATTGAACACGAACAA
GCCTTCCAGATTGCAAGAAAGGCAGAACATATTTTGGCGAAAGTACAATATCACGGACAT
CCTGCTTTAAAGTTCTGTACTGCTGTAAGAGATCATAATAGTCCTTCACGCTCTCCTCGT
CTTCAATAACCATGGAACTTCTTTCTACTTCCAGTTCCCTGACTTGCTTCTAAACAAAAT
TCAAACACATGAATGTCAGGATAAGTTCCTTGCAACAATGCTTCAGTGGCTGGGGTTTTT
GATGTATAAGCTCTTAGACAGAAAGGCACTGCTATGGTAATTCACACCAGCCGGTTTACC
AACATAATCTGCTATTCAAACTGGTAAATACAGGCTAGCTAGTGTCATTTCGACACATCC
AACGTAAGGGTTTACTGCACATATGCATGTGTGAACATTCAGGAACGCAACCGACACAGT
TTGGATGCCATTCTGAAAACCTTCTTTGTAAACATGCAACCATGTCATAAATGGCAAAAC
GCAAGTAACAAACATTGTTGTGGCAGGAACATCTTATTACATCTTAATGGGAACAGCAGG
GAATACCCCTAGAAAATAATTATATTGCAACATATATAGTACAGCAACCTTACATGAGTA
TCCATGGGATTGAAAGAACATGCTTGTGTGCCCAAGGCTAACTAACAGGATCATGGGCGA
AAGGACGAGAGGCAGACAGCAAATGGTAGCAGTTTATTCAATGAGTGAAAATACATAGAA
ATTTCAACAAACCTCAAGATCAGGGAGAGCTCTATCTGCTTGAAATTGGTAGAATGAATG
CCGAAGAAGCTTTTCTGGATCACCATCCTCAGAGCGTAGTTGATTCAGCAACATGTTGTA
GCTCAAATGAAAGGCACTAATCAAGAATATAATAATATCAGAGCCAGCAATATAAAAGAA
AAATGTGCATTTAAACAACTGGAAGAAACATAAGAAATACAGAAACAGTAAATGATTACT
TAAGCATGCTAACTCAAGATTCCAAGATGCAATGAACTGGTATAGCATGAATGGATGACA
CTAAGTTATTAGAATAGATACGGCGAACAACAGTTTCAAGCATAGAGTATACCAAGTGAA
ACATCCAACCCCAGTCAAAGTTCTCTGTCCAGATGGTCTTTCCATTCACAATATTCAGCT
GTGATGTATGTATTATTGTTCTAGATAGAAGTAGGAGTAAAGAATACATGATACAGACCT
GTTCAAACTATCAGCACCTCCTTTCAGCATCATTTTGG