Map Locations of contig_1585457 (5751 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1585457

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19571 2 1395 bp AK370001 Available Available None





CDS Structure of MLOC_19571






Contig Sequence (5751 bp)

>contig_1585457 5751 assembly3_WGSMorex_rbca.fasta
ATGGACTCCAAGAAGTGCCTATGGACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATGGAGAGATATGCTCTAACAGATA
CCCAAACAACACCAACACACCCATACAATAGATCACGTAGACAAAGAGCAAAGTCCTACG
AGACCGAAGTTATGCGTAGATAGAAAAATCCCAAAGTGATCGACGAAATGCAACAACAAC
CAAGGGCCCAACTATATCATGACAACACAACGACTATGTGTCATGTGGGAGCGTGTGACA
GATTTGTATCAAACATCGCCACCACACGCCTTATCTTGCTTCACGCCTCATAATAGATAC
CATGCGACTTGAGGAAGGCTTCCCACAGCAGCGGACCTAGGGCACACGGGGTCTTGCATC
GCCACATGATGATGGAGAAGCACATGGTGATGGATCCTAGGCGCATAGCGTAGATCGGTG
ACAGAGGGTTGATGCAGCCATGAGATTGAGGGAGGGAAAGGGAAATAAATTGAAGTTGGG
TCGCCTCCTACCTCTAGTAGTTTGCCCCAAGGCCTCGACAGCCTCCTCCTTCAGCGGTGG
CGAGGAAGCAGGACAACGATGATGGATGCTTTTTGGGTGACGATAGCAGGGGGATCCAAA
GAAAATTTGTTCTTTGGTAAGGACTCTTTTTAGGTCTTCAATAACTACAGAAACATGTGT
TTGTGGTGTTGTCGGGGATCAGAATTCATGAACCCGGCTTGCGGTCGTGACTTGATTGTT
GTTCCTAGTCCAAAACAAGTGTAATTTAGTTTTGCCTCTCGTAGTCTATGTCTTATTTAT
TCACATACTATTAAAGAGGATGCTGCCGTTTACTTAGCCGCAAGTGCGACACTCCTCTTA
TAGGGATGAGATCCTCCTATAGTGCATATGACAAGTGGAGTCGGGTCCTCGCGATAGCGA
CAATATTGTATACTTTAGATTTTTAGAGGATCCCAAACCCCTTCAAGAAGGTAGTCTTTG
TGTATTTGAGTTGAACAGAAGACAGTCTTTGGACCATGCACATTACTTCCTCTGTTTCTA
AATATAAGTTTTTTTAAAGGTTTCATTAAAAAATTATATATGAATGTATATAGACATATT
TTAGAGTGTAGATTCACTCAGTTTGCTCCGTATGCAGTCCCCTAGTAAAATCTCTAAAAA
GACTTATATTAAGGAATGAAGGGAGTACAACAGATCTGCATGACTGTATGCAGTGCTACA
TGGCAAAACACCGAGCAGACAAGATAAATATTGATTTGGTTTCCATGTTCTACTTTTTAG
AAGAACCACACATGCTTCAGTGCTACCCCCTAATCAGACAGGACAGAAGACAGTCTTTGG
ACGATCGTGCCCCTCTTTTCGAATTGTTTTTGAGAGATCTGCATGAACCATTCAATTGTA
CTATCTAGGTGATTCCTTGGTTACGACCTACCAAGCTGCTACTAACTTGTAGTGGAGGCT
AGTTTGATTTTCTGTAGTCAAAATCTGAGCTTTCTCGAGTTATTCAATGATGCCTCGACG
TAATTACTCGAATAGTACTCAAGATCCTCTTTTTCCAATTATCTAATATATCGTTTAAAG
AAAACATGTTATTTTATAAATTTACAACTTTTATGATCTCTTCCCGAACCAAACATGAAT
CTTTTGATTCATTTGACTCTCACGCTCCTTTTTCCTTCTTAGTTTGCTATAGCTATTTCC
ATATTCTTTTAAAGTAATGAGCCTATCCTCTATGTGTGGTGGAGATATGACTCAGTTTCG
TGGGACTAGACCAATTGTGTTAATGAAAGCCACATTTATAGTCTAGTTGTATGCTGAGAG
TGTTATTATACCAACCAGTAACGGATCTAGTCCAATGGATCAGGATGGTCCAATAGTAGA
ACTGTTTATAGCAAAAACCATCATAATATTTTTTAACTTTTTTTCTATAATATAAAGCCA
TTGAAAAAAATCAGGATGGGTCATGGCCCATCCTGTCCACCCTCTACCTACGCCTCTCAT
ACCAACTCACAACTTACAAGTGTGCCAATAATCTCAACAGGGCTAAAAGAACCAATATAT
TTTCACGGGTCAAATTAATTCATCCTGCCATTACGCTACCAGGCACACATAGCGCATGTT
GGCATTTAGTGATATACTCCCTCCGTTACTATTTACTCGAAGTAGTATAAGATTTGTGTC
AAGTCAAACTTTATAAAATTTGACCAAATTTATATTAAAAATGTCAACATCTACAATTCC
AAGTACATATATATGTAAGTCTACTTCATAAAGAATGAAATGATATAGATTTGATGTTTT
GAATGTTAATAGTTTTTCTATAAGTTTGATCAAAATAAAGATACTCTGATTTTAAACAAA
AAATATAAACTTACTGAAAAGAAACGAAGGGAGTACTTGCATTTTATTCAGATAAATTCG
ATCGGATATGTGCCTTACAATTGATTATTTTTCACTGGTCAGATAAACCTCCCAAAACAT
ACACTTCCACGCAACCCCTGACCAGCAAGAACCCTACAGCCTACAGGCCATCCACAAGAG
AAGAAGATACGTATACAAAAATAAAGGAATTGCCATAGTTGGCAAGCCCAAGAGGCCAAA
AAATAAAAAACAAACAGTCGTCTCATCCGATCGTATCATCGGACGCGTCGTCAGTGCGTG
CACCAGCGGCGTGTCACAATCCTCTGAACATGAGCGGCCTCGTGCTCCCGAACGCCATCT
CCCTGCGGCCCATCTCCATCCCGCAATGCTTCCGGCCGCCGGACGCCGGCACGCTGCGGC
GCAGGCGAGCTTCGGCCGCTGCAGTGCTGCTCGCCCCTCCCTCCCACGGCGTCTCCGACG
GCGCGGCCACGGCCAAGGCCACGGGCGCCGCTCGCTTGTACTTGCCGGACCACTTGGCCT
GCACGTACCGCGCGCGCCTCCATGGCGGCACGTGCATGCCCGCGCCTCGGATGGACTCCG
CCGCCGCCGCGCACATTGCCGCGGCGACCTCCTTGAACGTCTCCGGCGTCGCCACGAGAA
CCGCGGGGAGGGCGAGGAGGAGCTGCTGGTACTCTGCGCTGGGCCTCGCAGTCTCGAACT
CGGCGGCGATGTTGACCTCGACGATGTACCGCGACGTCAACGTGCCCGCTGCGATCACCA
CGTCCACGTACTCGTGGCTGCCCGCCGCCGGCACGCTGCTGCTTCTTTCCCACGACGATC
TGCAGACGCCTGCGTCCAATGATCACGAAAACAAAAATATCAATCTGTGTTGCTCAACAC
TCTTCTGTTCGAGAGGAATCTATACAACGCACTCTGAAATCTCCAAGCAAGGCGGGGCAC
TCACCGGCATCGAACCCTCTCGCACGGAGCCTGTCGGCGACGTGCTTCCTGACCCCTTCA
CCGCCAGCGACGTTCGGCCCCGCACCCACGGCGGCGCGGATCCGCGCCGCTCGCAGCGCG
TCAGCCCACGTGGTAGCGGGCCGCGGCGCCACAGCTTCCTTGGTGACGGCGTCCTCGCCG
TATCCGTTGTAGAACTCGTCCACCAGCTCCACCAGGCCGTCGTCGTCGTGGGCGTCCTCG
TGTCCGGCGGCGGACGGCGTGGTGCCGCCGAAGAACGGGCCGCGCAGCCGCGCCCTCGCC
GCCTCGTCCAGCGCCGCCGTGGCCTTCTTGTACGACGTCGGCGAGGACTCCATGATCGGC
GGCTCCGGTGGTTGCTGTGAAGTCGGAATAAGGATGGAGATTGGGCTCGCCGCCGCTCGT
GCGTTGGCCACCAGTTTTCCAAAGCAGTTGCAGGATTTTGGAGTAGCGTGTATCTGGCAA
GGGGGCGGGCCGTTTCTATATATGTTTCGGGTAGGTGCGTCTAGATTCGTTGTGCGCGGT
TTGCACGTCCAGGTTCAGTGAATCTGGCGCGTATGGTAGCCGTGCTTGCGCTGGGCATTC
TCAGGGTCGCCGCATCGGGGTTTGCTTACCTCATGGAAGCTTCAGTGGAAAGGGATGCTA
GTGGTGGAGTGGCTTAAGGTCCATTGGTGCGTCCAGATACATTACATGCTACTGCTATGT
TTTTAGCAGGGCTTAAGGTCCACTGAGTGATATTTAGAAGGTTTCCGCGGAAACAATGTA
AATTCGCTAAAATATGGACATGATTCCAGAGTTCCTGGTATCTGGGATGCAAAGTACTAA
CAACATATCCTTATTCAGATGGTCTCTTTACCAGTTCGAAATGTGCTTGGTGCGTCTAGA
TTCATGCTAGTTAGTTCAGACTTGAGAGACGGCATTGAGCTGAACTCACGGCGTGTCGCC
CGTGAGTGCGGAAGGAAAACGACGTCAGTTTTCCCAGGAACTGGTATGCAATTTTTAATT
TCTACTTCCTTAGTTATTAAATATAAGTTTTTTAAGAGATTTCACTACAACGGAGCAAAA
TGAATAAATTTACACTCTAAAATATATCAGTATGCATCCGTATGTAGTCCATAGTGAAAT
TTCTTAAAAGACTTATACTTCCTCCATTCCTAAATACAGTCTTTTAAATATTTTACTAAG
AGACTACATCCAACGCAAAATGAGTAAATCTATACTCTAAAATACGTCTATATACATCTG
TATGTAGTCTTTTAGTGAAACCGTTAAAAAGATTTATACTCCCTCCGTTCCTAANNNNAA
GTCTTTTAAGAGATTTTACTAAGGTCTTGTTTGGTGCGCAGGGTTTGAGGAGGTTTGTAG
GGGATTATCCTTGAGGGGATCAAAAACCCCGCGATTATCCAACGCAAAATGAGTGAATCT
ATATTTTAAAGTATGTCTATATGCATCTGTATGTAGTTCTCTAGTAAAACCTTTAAAAAA
ACTTATACGTATTTAGAAACGGATGAAGTATTCGTATTTAGGAACGGAGGGAGTACTATT
TAAGAACAGAGGAAATACAAAGATTGTCTAATAATCGGTTGATCGACTTTAACATATGGC
CTTTGCCTTATCCGGAAAAAGAAGTTGGAAAACTGAAGATCCTGCTGATATCAAATTAAA
TACTCCACCAAGTTGCACAATGAACGGTTGCTTCCTTGCCCAGGCAACGCTTTGGTCCCT
GAAATTAAAGAGTAACTCGACAGCTTTTGGTGAAGGCAAAGGGGCAATAACCGCGATGGA
CAGATACGGGGGTTATGATTCCCGTGGGCACCGGACGTCAGTGGAATCCGCGTATAAAGA
TGTTCGCAGCACGGCCACGGATCCTGTGGAACAACCCTTTAGCAGTCGCCACCTCAAGAA
ACATGAGCCACCAACCACAACCACCCCGAATGCACCCCAAGTCATGCAGGTAAGAGCAAG
TACAATTAAGCTGAATCAGCTGGCTTTAAAGAATAAACTAATATATTTTTGTTTAGTTAG
AGAAAAAAGAAGAGAAAAGAGAAAGGAGCAAGAAAATAAGGTACAGTCAGCAGGCTGTAA
GGATTAAAATACTATATTTTTTTTGAGTTGGATGAGAGAGAAAGGAAGCAGACTCTTCGT
GAAGAGCCAGCTCTAGCACNNNNTCCTAGGTGCTTTGTGAGAATGAATGATGGACCATAT
ATGATAAAAGTAGTACTTTTTTCTAGCTAACTATTGTACGAGCTAGCTATAAGATAGACT
ATAAGNNNNNNNNNNNNNNNNNNNNNNNNTACTATTAACCATGCTCTAAAAACAAGTACA
ATAGAGCTGGGTCAGCTGGCTATAAAGAATAAAGTAGTATATTTTTGCTTA