Map Locations of contig_1585270 (3742 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1585270

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19536 2 506 bp MLOC_19536.1 Available Available None





CDS Structure of MLOC_19536






Contig Sequence (3742 bp)

>contig_1585270 3742 assembly3_WGSMorex_rbca.fasta
CTGGCCCGCTCTCGCGCGACCTCCGGCGTCCCGCGGCCCCCCCCCGCCCCCCTCCACCGT
GGCCCGGGTAGCCGCCGCCTCCTCCTCCACCGTGGCCTGGGTAGCCTCCCCCGCCTCCTC
CAGGGTAGCCGCCGCCGCCGCCATAGCCCTCTACGCCTGCTTTCTTCTCTTCCTTCTTGG
CCTCTACATGAACAGAAGATAAACGGTGCATGGATATTAGGAGCAGCACGCAGCATAGCA
AAGCAAGTTTCTTAACCTAGTAACGAATTGACGATCAGGCAATTCATGCTAGTGCAAAAG
TATTCTGAGTAGCGCGTTAGCTCACTACTTTGTTCAGTTGAGGCGACGAGGATAGCAGCA
GCAAGCAGGAGAGCAAACACAAGAAGACCCTTGGACGCCATGCTTGACACCCTCTTCCTC
AGTGCTTCTAGTGGCTAGTGTGATGGATGATATGGACTAGCATGCATAGCAAGCCAATTT
ATAGGAGGGAGGGGCCGATGGAGGGCTTGGATAAGATGGCTGGCTAGAGACGGGCTGTGA
CTGTGTGGTGAGCAAGTTGAGGCGCTGGGCGGGGTCTCCATGGGTGTCGTCGGCAACGCG
GACCGTGGACAGGCCCCTTGGAGCGGTGGTGGTTGGGGAGTGGACGGTACACATTAATGC
ATCCCAGCAATCTAGCATGCAAGTAAACTAAGCTCCGCTCATCTGCAGGAGTACCAATGG
CGCCAGCCTCTGACTATGCACGGTGCAGGTGGGCACTGCTGGCGCGACGACGCAGTCGTA
CTCGGCGTCTACCATTGCATGCACGCAACGCATCAATCCAATTAATCACCTCTGGGTCAA
GTTAGACACGGACGCATGCATGTCCAAATCGTCCGAGCATATTCTGGATCGGATATCTTC
TTCTGCATTTGGAAACCGGGTACATACCGGACGTGGAGCATTGCTGAACGTTCGTACGTG
GTGGGTAGTCTTTGAGGCAGCCACACATATATCTCACACCCCATTTCCTTCACTTACGTA
CGTACGGACAGTGAACTTACGAAATTGTTATCCAAGGCCACGTACCACACACCGATCCTC
TGGCTCCTATATGTGGTGCATGTTTCCGTTCTAAAAACATGGTTGAGATCATACTGAAGT
AAAAAAAATCAACGGATGTTAACAATTCATGTAATGAAGCATCGTGCGAATTTTTAATAA
TATCAAATGAGTTCAAGATTTGAAAAAGATCCCAGTTGCAAGAAAAAATACACTTGTTTC
TGTACTTTCTGAATTTTGTATTAGAGTTAAGTTAAATTTTAAGCTAAGTTTTAACTTTGT
TTCCAAGGTTTACCCCCATTTAAGTACAATTATTCCATTATACCCCATTTAATAAATCAT
TTTCCTGATTTATTATTTTATTTTTAGCTATTCAGCCAAGAAAAACCCACATATCAGTGC
ACATGTGGCATACCACGTAGATGGCTTTTTCCGCATACTTTAGCAAGGCATATATACATA
TATTATTATTTTTTGCAAAAAAAGTTTATTATAAAAGTTCATCAAAAGTACAATCTACCT
CAAACATAATAAAAATGACATCAAGATTTCTACACCACCGAGCGACCACAATCGTCACCG
AACAAGCTGGTGATACGCCGCACCATTACCAAAGCTGACTCGACCACATCCACAAAGTCT
TGGTGGAACATATGACCTTTTAGAAATTGCACTATGAACTATATACGGATCTACATAGAC
ATATTTTAAAATGTAGATTTATTCATTTTGCTTCGTATGTAATTTTTCAGTAAAATCTCT
AAAAGGTATTATATTTAGGAACGGAGGGAGTACTTACCAGCTAGAGATAACCCTATCCAA
GACTACATCAAGCCTATTGATACAAATGTTAGTGAAAACTTTAGAAACAAATCAACTGAT
GGCACTAAATGTTTTCATGTTGGTCGCACCTACCTCCGACTAAACCTGGACGTACACCGG
ACCGGGTCGGACTTTGGAAAGCCCGAACCAACAATCTCATGCCCGAGCCCGGCTCGGCCC
GGCCAAAAAACGCAAATCTCAGGCCCGAGCCCGGCCCGATTGGACTAAAAAGGGAATTTT
CGGGATGGGTCAGGCCGGATCTTCGTGTAGAATGGTGATTTGTGCAAGCCTGAGTCCGGC
CCAAACTGCTACCTGGGCTTGAAAACCCGACCCGTACTGCAAGCCCGGCCCAGCCCGGCG
CAGGTTTTTCGGGCCGGGCTCGGACCAGGCTGCCCATGCCCAGATTTACCTCCCACCAGA
GTAAGCATGGCAAAGTTAAGCCTATATATAAATCAATAGTATGTTTTTTCCCGTTTGTAT
ATGTTTCCTCACCCCAAACTTATATGTATTGAAATCAATAGGAAAGGAAGAAGGGGTTCT
GTGTATGCGAGACACAAATGTATTATGCACAACAAAATGTTGCCAAATTCTTTCTTGGGT
AAATCACACAACCACATGCCAAATTTCATTAATAAAAGAATGGGCAAGACGAGCAGGTGA
ACTGTGATAGTACATTTACGGAGATTGCATTACGTGCACAGTGAGAAAATTGCAATGGTT
CACAGTGCATTTTTTTGTCCCGATATTTATGATATGTGTGGCACAATAGACATCCGACCA
CATGACTCATCAGGTCGTCTCAAAGAGTCAGCTCAGATTATCCTGTGTTGGCGAACATTA
AAATGCCCACATGTCCAGTTGCAACTTCGACAGCCCGCACGTTGACCCAATAACAACTAC
TCATTCCCGCCTCTTACGTATGACACGAAGCAATTCCGTCCTGACGCTTTTTATGATAGT
TTTACTTATTCGGAGATGACAACTTTAATTATAAACAGTAATGCTACACATACAGGCAAT
TACGGACTGATTTTGTTTACATGATGACATGGCAACAGGTGATTGGAGAGAAGGAGAGTG
AGGTGGGCCACCCCAATGAAAAATCAGGGAGGGCTGAGATTATTTATGAAGGGTCCGTAA
TGACCCTGTAAAAGGTCCGTAGGTCTAGAATTATTGAATTATAAAAGATGGCAAGTTTCG
GTTTCTCTTTTTTTTCTCAAATGGCAATTTAGTTGTAAAAACGTCAGGACAGTGTTACTT
CGTGCGACAGTGTGACACTTATCATTTTGGTTAACTATAGTTGTCACGTGTGATTTGTTG
CGAACCGACTAAAACTGTACGCAATTAGCGAACTGTCATTAGGACGTGATTAGTCCGTTA
TTAGTCTAGTCGTACGGATGCATCCGTCCATACAGACGCCTTTTTGTACAGACGCCTTTT
ACTCACGTCCCAATCCTTGTATATATATTTCAGATCAATGGAAGAGAAGATGATTCGCAC
AAACACTTTCGTTTCTAATCTTTACACGTTATCGAGCACTGTCTCTACCAAAAGAGCCAT
CTCAGAACAAAGAGAAGACAAGAGAAAGAAGAAAGGTGAGAACAATGGCAGGAGACTTGT
CTTCCCTAGCTTTTGCCTTCGCGCGCTTCATCCAGAAGGAAACATATCGCCGTCGTTTTC
CTCGCGCTCAGAACCACCAGGCCACCCATCGTCGTCATGGACTTGGCGGATCAAGTGGCC
CTTGACGCACCTTTTTCGCGAGGAAGAATCGCCGCCGTGCCCGCTCCAGTCGTGGTCGCC
ACGGCCCTGCACCACCAGTGCAGCAAGCAGGACCGGGCACCCATGATGTGCCCGTCGAGA
TGGTCGCGCCGGCGCCTCCAGC