Contig Data
morexGenes
Links



Map Locations of contig_1585072 (3708 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1585072

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19482 4 1002 bp MLOC_19482.1 Available Available LOC_Os05g46480.2, FRAME:-3, EVALUE:2e-52, 13105.m04962 protein late embryogenesis abundant protein, group 3, putative, expressed





CDS Structure of MLOC_19482






Contig Sequence (3708 bp)

>contig_1585072 3708 assembly3_WGSMorex_rbca.fasta
TTGTAACACATGTACATTTGACAAACGAAGACGGAAAAATAGTTGTAGTCATAAGACATG
TAACAAAGTCCGTTACAACGCACGGGCTTTTGTACTAGTATAAATAAAAGCCAACAAGGG
TTAACCCAAAGACCCTTAGATTGGTCTCATTTTTCCTAAAAACAAAAATCATGACCATAG
CCTGTACGCTTTAAGGACGAAATAGCTATATTATCGTTATTAGTTATTATTACACCATTG
CTGAACTTAAAACGAGAACTCTGAACACCAAGATACTCGTCAGTGAGACATCCTCACCCG
ACCATGAGTGACACACACAGACAGACTCGGACACGCCACAGGAATCTGGAGCTCCAGGAA
CTGAAGGAAATAAAAGCATATATATGCAACCGCGAGAGGTATATCTAGTGACGACTCTTG
GTGACCGTCTCGGTGGTGTTATCTCCCCCCATCCCCAGCGTGTTCGCCACCGCGTCCTTA
GCGCCGACCACCGCGTTCTTCACCTGCTCGCCGGCCTACACAGTAACCAAGTTCAGCATA
CGCAGCAGCAGCACAAAGAGAATGATCTACACAATGCCGTCTTTGACAAGTGTAAGTGGC
TGACGCACTGACCTGACCGAGGACGCTGCCGGTCTTGTCCTTGCCGGCGACGGCGGAGTC
CTTGGTGTACTGCGCCGCGTCGGAGGCCCTGTCCTGCGTGTACCCCGTCGCCTCGGAGGC
CTTCTGCTTGGCGGCCTCGGCCGTGCGGCCGAGGTAGCTGCCGGCCTCGTCCTTGCCCTC
GGCGGCCCGGTCCTTGGCGGCCTGCGCCGTCTCGGACGTCTTCTGCCCCGCCTCGCCGGC
CTTCTGCTTCGTGGCCTCCGCAGCGCCCTGCCCCTTCCCCGTCGCCTGCCCCGCCGCGCC
CGACGCCCGGTCCTTGGCCTCGTACGCCTTGTCCTTGGCCGCGCCGGTCACCTGTCCGGC
CTTCTCCTGCAACCACACCACAACGACGGGAACATTTCAGGAGACCGAACACGGAGCGTG
TTTACGTACGACGGCAGCTACGTGAAGAGGATCCGTCGAGATGGTCACCTCGGTGTGGGC
CTTGGCCTCGCCGGCGCGGTAGCTCGCCTTGTCCTGGTTGGAGGCCATGGCTGATGGCTC
GAACAAACACTTGAGTACAGACACGAACGGAGATCTCTTGGGAAAAGAAAAGAAAGTTCG
CTTTTGCCTAATGGTTAGCTCGGATCAGCTGCTTGCTGCAAGGAGCTTGGAACAGGAAAT
ATTTATAAGCTGCGGCTACCATACGGATAGAGCCCGCGGGCAGGACACGTAGCAGGCGGA
GCTCGCACTGTCCGCCACGTAGAAAGAGGACACGCCTTGTCACCCACGCGTCCGTACCTT
CGCGAAGCCCATAGGACAAAATCAATGTTTTGACCCACAAGAAAAGAATTCATAAAATGA
ACTCGGTTCGAAAAGATTCATGATCTGACACTTTTAGAAGCCCATGACATTATTGTTTCA
TGTAAAAACGTCAGTCTATAATAACGTTTTTAATACACATTCAGACGTCAGTCTAGCCAA
TCTGCGTTATAGTCAAACCCCATTGATTATGGCGTTTCCAACCACGTCATGGCTGGCTTA
GCTAGTACGGCATGCATGCATCCCTCTCTCACCCTATGGTTGGCTTAGCTAGTAAGGCAT
GCATGCATGTAGCTTGAGGAGAGAGAGAGAGGAATAATATTATAGGTTGACGCCATGCGC
CTTGATGTTGCTATATAGGTTGCAATGCCATGTGCCTTGGCGTTGTTGTATAGGTAGACT
GGTGTTTCTACGTGCAGCAGCAACACTACAGACTCTGACGTATCTAAAAAGGGCCAGATC
CGCAAATATTTTCAGAATGAGTTCATTTTGTGCTCATGTTTACCTGTAAGGTCAGAACAG
TGAAAAAACTCAAGCCTGTACATGTAGACAAAGCTAATTCCAAACCCATGTGCGCCAAAA
GAATTGATAAGCCTTGCCATAACGGAAGTAAGGCTGATGTTATTGTATGATATTACCTTT
ATAATGCATAGTATTATAAATTAGTATCATGGATAACCTTATTATTGACATGCATGATAT
ATAGTAGCATAACATTTTACATGTTACGGTATCTACAAACATGCTGATGTGACAGACAAT
TAAAGAAGAGAGACGGGTTAGAGTAACATAGGTAGATACCGTAACATGTAAAATGTTATG
CTACTATGTGTCATGCATCTCAATAAATGAGGTCATCTATGATACTACTTTATGATACTA
TGCATTATGGAGGTAGTATCATACAATAATATCATATGCATGATACTACTATATGATACT
CCCATTATGACCAGCCTAAGCAAACCCGTCCGAAAATCGATACATAATCACACACGTTAG
TTCCGAGGTTGCATCTCAAATGAGTCGATAACTCAATCATCCAAACAATCATAGTCGACA
CCCCACCACGCGACCAAGAACCGCCTCTACGGCTTGCTAACCTTAAGAACACCTACACAT
GAGCCTTGTGGCCGCATACCAAACAAACCGATGACCCTACTATCCAAGCAACCAGAGTCG
ACACCCTACAGCAGGATCAGAAGTTGTCGCTCCGACTTACAAACCACATCAAACGCACAC
ACCGACCCCCGAGGCCACGTGCTGAACTAGTCAACGACCCCGCCACCCAAGCAGCCTGGG
ACGACACCTTGGAAATCCGGAGCAGAAACTCTGACTTCCACGCCGACCCCTGTGGAGACC
CTGACTCATAAGTCCCGATAACCGAATGCACGTGTAGAATGATCCGAGGGATCAATGTTT
CATACATACAGTATGATACAAATAAAGACCATTAAGGTCAAGCCTTACATAGATAGGGCC
TTGAAGGCCAACGCATAAAACATAACTAGTAGCGAAAATCTTGAACAAAAGCGTGAACCC
ATGACATCTGCCTTAACCTTATATACATTCTGACTCGGAAGCGTCCTAATTTGCATGTTC
GTCGCCAACAAACTCTTCACCATACTCCCATTTTTCCATGCATGGCCAATTAAATAACTA
GTGGCAAGCCAATGAATACTTTAAATGTACTCGTAAGCAATCCATGTTTGTAACAAGGTA
ATAACAATGCATGATATAGCACTAAGTAGGTAAGTTGCAAAAATCTAATTTTGAGTGCCA
TGACATGTTAAATCAACTTGCAAAGCATGCATCAACATGTTGCGGATATCCATACAAACA
AGCTACGGGTATCATCATAAGCAGGGGTTGAACATCTCATGTTCATTTATCATGTGAAGT
CATGTGACTCAGGTCAAGCATCATCTTTTTCACACTATCATCTTTCTCTCTCACACACAC
ACGCCAAGTTTGTGAAAACATCTGGACATAGTCTAAGAAGGACCACAAACTGTTCATGAC
CGTGGACATAGCTAGTTGAATAAATTTACACTATGTAGAGGTTGCACACTTTACCCACAA
GACTCCGAAAACTTCCGTGTCAAGACACCACTCACGATATTGTGCATACCCGAGGTAAGT
ACCCAAAATAATGCCTGTCTCCAGACGACACTAACATACAGTCCACTCATTGGCACACAG
CCCGCATGATGTACATCACAAGCATCATCCATGAAGGGACCAACGGTGTGCCCGTTGTCT
GTAAAAACCGCCCATGGTCGTCTTTCCGGCACGACCCCGTATCGAGAG