Contig Data
morexGenes
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Map Locations of contig_158484 (4611 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_158484

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19405 2 2745 bp MLOC_19405.1 Available Available LOC_Os05g34270.1, FRAME:-1, EVALUE:0.0, 13105.m03563 protein inactive receptor kinase At1g27190 precursor, putative, expressed





CDS Structure of MLOC_19405






Contig Sequence (4611 bp)

>contig_158484 4611 assembly3_WGSMorex_rbca.fasta
CTCATAGTGATTACGCCTTCGTGCGTCCGTGGTTTTCTTCCGCAAGGATTTTCACGTAAA
AATCCGTGTCTTCGTGTCTCGTTGATATCGTTTTATCTAACAATGAGAGGTACCGGACGG
ATCATGCCTGCCAACAGCCTCCTCTGGGATGGATGTAGTGCATGCATATGAGTGTAACGC
ATCCGTTCTGTATGTAGTGTGCCCTTTGGCTGAAGCAGTACATTCTCATTACACTTTCTG
TTTGTAGCCGGGTGCATTTCACCTGCATGCGGATGTGAGAATAACTACTTGCTGTGATTG
ATTGAGCTGTTAACAAATGTAATCACTAGCTAAATCGGATCGGCGTTCTTTCTTTTCGTT
GCTTCAAATTGTCTCCCCTTTACGTTGATTGGTAAATAACAAAAGGTTGGTCAGATTTCA
GTCCACAACGCATACATCACACGTAATTTATCATCTTTCCCCCTGGTCTGAAACATGTAT
CAGCACACAACATCTACGTCAGAACCTTTGGCTCAAATGGTACATGCAAAAGAGAGGATA
ACCCTCCAATGACTGCTGCCCTGTATCACTGAACCTGAGGACTGCACCCACCTCTTCGTC
CACTGTCGTTTTACTAGGGCTGTTTGGAGGAGTTTCAGTACCTGGTCGGGTGCGGCTTTT
ATAACCCCTGATGAGAGGTTTACCAGCACTGAAGACTGGTGGCTGACGGCTAGGGCTGCT
ATTCCCAAGCCTCTCCGGTGCAATTTCGACACCGTGGTCATCCTTATACACTGGAGAATC
TGGAAGGAAAGAAATGCCAGAATTTTTGAGAACAAGGCGAGCTCCATGGATAGGCTGCGG
AACTTGATCAGGGATGATCTACAAGTTTGGAAATCGGCTGGTTGTGTATGTGATCTAGAT
AGCTAATCCGATTCGGGTACCTTCTTAGGTACTAGGGGGTCCTCTCTCCCCCTGTTTTGT
ACTGGCTGTGTCGTGTCTAGCTTTCCTAGACATCACCAGGTTGTACCCTCTTTCCCCTAT
CTAATAAAATTCGGCCTATGGCCCTTCGAAATGGTACCTAGTTCCTCCTTCTCATGGTCT
ACAATTTGTAAGTTCAAGCGACAGTTTTCAGTCACAGCATGCACAGAAACCAAATTTAAA
ATATATTAGTATGAGCCAGTTATGCCTGACAAGCCCAATGCTAATATTTTCATCCAGCAC
ATCATTTTTCTACATAATCAAAGTTTCAGAAAGGTTGAGTGCACGCAGTCAGACGCCCAC
TTCTCTCAACGAAGGGATTACTCTTCGGTACCATCTCAAACATTTGCGGTTTAAGACTGG
TTCATTATCTAGTTTTTCGAGGGATAATATGTTAGTATCAAGCTGATATCAAGTACACTT
GGTCTCTCTACAACAACACATTGTCAAGAACTATCCAGGACACAGAATAATTCTTACAGA
CAAATTATCTGAAAAATGGAAAAATAAGAAACATGGCACAATGTCATGCCAGATTCAGCC
ACCGAAGTTCCGATCACGGGTTTTCACCCTGGAGAGCATCTCGGAGCCATTCCAAAGAGC
ACAATCCCAATATGGCATAATCACATAGCAACTCAAGAGTTAGCTAACTAACAAGTACTC
CATCCTTAAATAGCAGTATGAAAATTATCCTTGCTGCTACTAGCACCACCATCCAATGGT
GGATAAGAGAACCAAGCTACAGGAACTATATATACATTGTATGCAGCGCACCGCTACTCA
CTTGAGCATGGTAATGCCCATGGAAAAAATATTAAAGACCATACAAGGGGGAACGCCTTG
CTTCTTGCCTTTTGCAACGGATTTGCAACTACATGGCAACAATGAGCTCGTCCGGGGTTT
CTCCATCTGTGGTTAGAGGTGGCAGCATCATGTCGTCCCCGGCCGAGAAATGGTACTTCT
CCCCAATGGCCCTAAGCAGCTGATAAACCTCAAACATGGTGGGTCTCTCCTTAGCGGTGG
TGACTGTGCAAGAACACGCGACTTTCAGGAATTGCATCAGCTCACTGTCATTGTCCTTCC
CGATCAAAGACTTGTCGATTGAGTCTTGGAGAATAGCATTGTTGGATAGGTAAGTGATCC
ATTCTACTAGATTCCCCCTGAAGTTGTCTGGAGCAGTGGAAACCTGAGTAGGCCTCTCAC
CGGTGATAAGCTCAAGCAGAACCACTCCAAAGCTGTAGACGTCACCCTTCGGCGTTGCCA
CCAGCGTGCTCCCGTACTCTGGCGCCACATAACCAATATCTCCGAATTCACCGTTCACAA
ATGTGCTGAGATGGGTGTCTAGGGGATTCATAAGCCTAGCAAGCCCAAAATCCGAAATCT
TCGGTTCATAGTCGTCATCCAAGAGGATGCATTTGGAGCTTATATTCCGGTGAAGGATTC
GAGGATTGCAAGTGTGGTGAAGATATGCTAGGCCTTTTGCTGCACCAATACCAATTCTTA
ACCTCAGAGGCCAATCCATGTTGCAATCTTTCCCCTCTTCGTGTAACTGATCATAGAGTG
AACCTTTGGGTGTGTGCTTGTACACCAACAACTTCTCCCTCTTAGCAATGCAAAATCCAA
GAAGAGGAACCAAGTTGCGGTTCCTTACTTGGCCAAGTGTCTTCATTTCTGAAGTGAACT
GTGATTCAGAATGTTGTGAATCTTGTAGCCTTTTGACAGCAAGAAAAGAACCATCAGGTA
ACACTGCCCTGTACATAGTCCCTGTCCTTCCAGTAGCTATGATGTTTTCCTTGCTGAACT
GTTTGGTGGCCTTCATAAGATCACTTAGTTTCATCTTTGAAACTGGATTCTCAAACATAG
ACACCTGAATAATCCAGAAAACCATGACGACAGTAAGGTATTGCTAAAACTTTTGTGAAC
AATGCTATTGGACATTGCCTTTCGACCCAAAATAAAAGGAAAGAAAACAACAGAATAGTT
TACCTTGATTGCTTTTGTTCCTTTGATACTCTTTGCCCACTTATTTTCATCCTCATCCTT
TTTTGCTCTCTTAGCTGGTAATTTCCGCAGACAAAAGAACACAACTATCACAACAATTAT
GATCACAACTACCACTCCAACAATAGCTCCAACAATTGCTGCAGTGTTCTTGCTCTTTGT
TGAAGCTTGGCACTCATCTAATGGATCCCCACATAGCCCTTGATTACCGGCAAAGTTTGA
TGCCGAAAACTTTGTAAAAATAGTTGGAATAAACCCTGTTAGTTGGTTGTCTGCGACATT
GAATTGAGTTAACCGAGTAAGAAGATTGAACTGCAGTGGGATTTGGCCACTAAGCTGGTT
ATGTTGGAGATTGAGGAGGTTCAGGTATGTCATATTTGATATATTTTGTGGGATGGCGCC
AGAAAAACTATTGTAGGAGAGGTCCAATGATGTTAAGTATGGTATTTCCCGGGAGATGTC
TTGAGGGATAAGTCCTGAAAAGTTGTTGTTTGACAGATCCAGCCCAGTCATACTGCTACA
ATTCTGAAGACCACGAGGAAATGGACCCTGGAGACCAAGGTTACCTAGGCGCAAAGAAAG
AACCCGGTCCTCATCCGGGTGCCAACATTCCACACCGGTAAATCGGCATATGAAACCAAC
AGTAACGTTCTCAAAATTCCATGAGGATTTGAGTACACCGTTGGGGTCATTCACTGACTG
CTGAACAGATTTCAAGCATTGGATATCAGCTTCAGAGGCAAAACAAGTGAAGACCAACAA
CAGTATAAGAATAACCCTCAGAGGAGCATAATGATTTGCCATTGAGCACTTGCACCAAAC
TTCACCTCTCCTCCGTGACAACACCACTTGCAGGTTCAAGCTTCACCTACACGTAAACGC
AGTCGAATTTATAAAATTAGAGACACACATACCAGTTGGTGATAGCAACCATATTCTAGA
ACGAAAAGATTGATTTGATTGCAGTGCTGAAAAGCATAACACAAAGACGACATCAGTGGG
GAACTGATCCCCACTACGGCCATAGCAAATAACATATGGTGCGAAGATTCTGCTAAGATT
AGCACCAAATAATAGGTGCAATGGGTCGCATGGTAATTATCCATCACCCCTAACAATAAC
AGTAAGAACTCGCAACCTTGTTCTTCCATTATTGTCTATAAGCATAAGTGGAAACTTGCA
ACCGGGGGCAGTTCCTGGCTTCTGAGCCATCAATCGAGACCACAGTTATTATTTACAGAA
ACAACCAACGGGCTTCCTCTTATTAAATATCTGGATTTCTCACAAGAGAAGCGAACGGCT
CGAACTGCCAAAAGGCGCACTTTCCAGAAAGAAGAAAATCTAAGGGAAGGGGCAGCAAAA
AAAAAATAAAAAAAATCTCCAAAAGGAATGGCGCCGCACCATCCATATGTCGCATATGTG
CATGCTATTTTTCTACCTGATTTCCCTCCCAGGGGCCGTCCCTCTTTGATCCTTTTTAAC
TAAAAAAGAAGAAAGAAGAAGCACTGGACAAACCCATTGCTGCTGCTGCTGCTTCCCCAG
CAACAAACCCGCACCAATCAGGCCAAGAAAGAGGCAAGCGATTTCTTGCCCGGAGTTTCT
AGCCGGAATACGAACTCCCTGGCGACTGCAGGAGCCCCCCCCCCCCCCCCC