Contig Data
morexGenes
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Map Locations of contig_1584623 (2785 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1584623

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19356 2 1574 bp MLOC_19356.2 Available Available LOC_Os11g33270.1, FRAME:-3, EVALUE:8e-92, 13111.m03256 protein glycosyl hydrolases family 16, putative, expressed





CDS Structure of MLOC_19356






Contig Sequence (2785 bp)

>contig_1584623 2785 assembly3_WGSMorex_rbca.fasta
TTACAACCATTGAAGATGCCCTAATTCCGCGGTGAAGTGAACTGTATTGCACGCGCCAAT
GAGACGCTGAGGCATAATTGCCTTGCCTGGAGCAGCGGCCCAGGGGCAGACCGACCTCCA
CCCTTGGTATTCGCATCGATTGCACATGCGCACCGATCTTAGCTGCTGTTCTAGTTACGG
ATATTACGCTTTGTTTGGGCAGTACAGATTTTAAAACATCATGTTCCAAGCATGTACGGC
ACATTAAAGTTTACCTGTGAGAGCAAACCAACGTGTGGGTCTGGGTCGATGTTGGATGGT
TGGAATAACAGAGCCTATCATGGTTAAAGTCATGCTGCTTGCATTATTATTGAATTTATT
TTAAAAAAATTAAGAATACGTTTTCAATGGTGAAGGAGATATTCCGCCTCAGTCTTTCAA
AGATAAAGATATTGATAGAGATAAGATATGTATGCGTCTGTATATAGTTTAAAAAAAAGT
TTACCTGTCAGATGCTAAATCTAGTTCTAGTACTAGTCGCCTATGAGTTACCTATAGTCG
TTTTCTCATTTGTCACCAACAAAGCAAAGGAAAGGAAAAAGTAACATAATTTTACGAGTA
AAAATACGAAAGTGGGGATGGAAGAGGTACGCGATCATGTAGAGGTTCCAGAGGACGGAG
TAGGAGTGGTAGTCCTTGGTTGGGTCGAACCAGAGGTAGATCCTCTGTTCCCGGTCGCCC
TTCCCGCCGGAGAACACGTTCGTCTGCAGGATGTACGGCTGCCCCGTCCTGTTCCCCAAG
AACTCGAAGTCGATCTCGTCGTGCTCCGAGTTCTGCGACGACAGCTGCAAATGCAATCCA
TCCGTCATTCCAGATGCAAAGATTACATTATACTCCCTCCGTACCAAAAATACTTGAAGT
TAGGAAGAACTAAACTAGTACTCTCCGACTACAAATATTTAGGTAAAGAGGGAGTACTAT
ATATACTGCTGCTGGCTATGGCTGCATGCATCATCGTGATGCAGAGAGGCGGGGGCAATC
CTCCTTTTCAAAAAAGAAAAAAAAAATACTGCTGCTGGCTGCACACGAACAAGCGAAACT
GCACAAGGACGAGATGTAGATGAATGCGAGGGAATATAGGGCGTACGTAGAAGGCGGTGA
CTGTGCCGGCGGAGTCGCCGCCGACGAGCTTGATGTGCATGCTGAAGTGGCCGAAGAGGT
AGGAGCCCCGGGTCTGGAAGCCAGTGCCGGTGGTCTTGTCGAGGGACAGCTGCACCTCCC
GTCCGCCGTTCACGTAGTGGATGTGGTCCTCCGCCCATGTCGGGACGTAGTTCTTCTCGA
ATGGCACGTCCACCGGCTTCCGGGGCGGCGCTGCCGCGATGCCTCGCAGTAGCACCGTGG
CCACCACGGCGAGGAGGGCCCCCGCGGTAGCCTTCATTTCGCCGGCCTCTCTTCCTCCTC
CTCTGTTACTTCTAGAAACAATGGCTTGGCTAGTACTACTAGAAACAATGGCCGAGTGGT
GGACTGCTTGTGGTGGATGCTAAGATGGAGAAGTCTGTGGGTATTTATAGCTAGTTTGAG
CTCACTAGGTTCCCGGAGTACCAGCGCTATATATTATTGGTTTGCTTGGCGAAATAATAT
TAACCTGTTTTGACGTGGCACTAGATGAACATGATCGATCGAGGGATGGCAATCGAGTGA
TGAGTGAGCGAGCGAGCGAGCTAACAACCAGCCAGCTGCATCCAGTGCATTGGGACGCTG
TGGAGTGAGGTGCTTGCGAGGTGCAATGGTTGTCTTGTGCGTGTCTGTCAGGTTGGCCCA
GCGCGAGCAAATCAAGCATGGCTGATTGATCTACGGATCATGCACGTCGCAACTTGCTGC
CACAGATTCATTTATTTGCCAACGGATCGGAGTACGTTTTTGCAGCATTACACTCGACGG
ACCAGCCTCTTTCGTTTTTGCGGCATTTGTTCTTTCTTCTGTTGAAGTCTAATTTCTGCA
TCAGACTTTGAGGAGATGTTTCAGATCAGTTATTTTGTGAACCTGTTTTTACACGAGGTT
TTGAGAAGTTGATGAATGATGATGCCGTGAAGAGGGCCCAAGTTGATCCCTTCTTGTGCA
GGTCTCACGCACAAGAACAGTGGCTGGCAGGAATCAATGCAGGTCACATGGGTGTGCATG
TTGCAGACTCGCATCACAATCAGGAGCTGTCCCAAGCGGAAGCGGAGCGCGAATCTCCAA
ATGTAACGCCACGCGTGCTGCGGTAGGGTCGGCGACCCTGCCGGAGCAACGCTACCGACA
CAGACCCGTTCCTTTCCGGTGGAGTCGAGGTACTGCAGCTAGATCCATCGGGTCATTCTG
ATTAGGGTTAGGGTAAGCAGCTGGACAGCATTTCGATGGATTGATTGAATCCACCACCGG
CGCCGGAGAAAACACTATCAGTAGCTCTATATGTACGCCGACACGGTCACACAGTCTATG
GTGCTCGTAGCAGCTTCAGTTGATCAGTTCAAATATGCATGCAGTAACATCAACTGTAAT
AAAACCTTTTGGTGGCAGAATTAATCCGGTATTATTATTATAAAGTTACTACCCTAGGTC
TCTGAGCATTCCAGTTTCCACGTACGTGGTTGCTCCTGAGTCGTGATGGCATGCGAGCCT
TTGCTCCCGTGTGCCCATATTTTATCTACTCGTGAATAAGTGGTGTTTCTTTTCAGAGAC
TTTTTGATGTAGAGACTAAAAAAAATCCCTTTTAGTCCCATGTGAAAAAAACAGGAGGGA
CTTCTAGTATATTACTAGGGGTAAC