Contig Data
morexGenes
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Map Locations of contig_158460 (5131 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_158460

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19351 1 769 bp AK372528 Available Available None
MLOC_19349 1 395 bp MLOC_19349.1 Available Available None
MLOC_19350 1 373 bp None Available Available None
MLOC_19352 3 2944 bp MLOC_19352.1 Available Available LOC_Os03g21640.2, FRAME:-2, EVALUE:1e-124, 13103.m02597 protein expressed protein





CDS Structure of MLOC_19351






CDS Structure of MLOC_19349






CDS Structure of MLOC_19350






CDS Structure of MLOC_19352






Contig Sequence (5131 bp)

>contig_158460 5131 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGAGGCATAACATCTCCTCGTCAAGATCAAGCCCAACAAAATGGA
GAACTAATAAAGCAGTCTATACATACAATCGTAAACGCCGAAAATTTGATCTCCAGAAAC
TATACACACATCAAAGAGCACACATAATTGCCAAACAAGTAAGCTTGTGGACAGATGAAT
GGCAAACAACAATGTGAGCCCACACATTCATTAGAATGCTAACTACTACTGTAATACCAA
ATTACCTATCACTCTATCATCATTCCAAAAACTCACACTTCATGTATAGTTTCTCCTAAA
ATCGCCAATCCTGACAAACGAAGTTGAATTACCTATGACCCGAGCTTCATAGATTCCAGT
CAATGAATCCCTTTCTTGAACATCCCTTGGAATGGCAAGCCCATTCTTTTCTCTTTTGGT
TTTGATCCCTTCACCGCAGCATGTTTAGCATCTGAACCATCAGTCACGCAAACGCCTTTC
CCCTTCACGTCATATGTTCTTGCATTAGGCGTTCGTCTGGTGAAACTCTCATACAGATCA
GGAGAATGCCGCATCAGCTCACTCGCCGAAGAGTACCCCATCAACCGATGAAGCTTAGAC
TCCTTGGTACTTGTTTCATCAATGGTGTTGAAAGATGAGTTCCTTGACACATGCAAGGGT
CGCTCGTCCTCGGTAGAATAGCTCGCACCAGCCGAGATACCGTATTCTTCCGAGTATGAG
TACGAATATGGTTCAGCTTGATGGGCAGCAGTGTTATGGCCATCACCTACCTGGTGAATT
TCCGAGTCATCTGTGCTGGACTCGTCACCCCCAAATGGTGACTGAAGTTTCCTTCTGTTG
GGGTCTCTGTAAGAGTAGGAGAGAACCTGCGCGCAGGAGCCACACCGCAGCCTGCGTGTT
CCTCTGCTCGGAATGGCAAAATCGGTGGGCAGCTGCACGAGCTTCATACAGTTGGAGCAA
AGGACGAATGGCGCGCCCCTTAGGACTGGCCGGCAGAGATTTCTCGAGGCAGGCCGCCGC
TTTATCTCCTTAGCCGGTGGCTTGTGCGGTGCAGGTTCTTGTTTCCAGGAGCTGCAACGG
GGTGGGCGGCAGCTATGATGGCATTGGTGAGGGCAAGGTCTCATTTCCAGTTGCCCACTA
CGAATGTATGAATAGGCGCTGCGCCGGCCATACCGCGGTAAGGGCAGTCCATGGCCATGG
GGAGCAACTTGGCCAGACCTACTCAGGCGAGATGCATAGCCCGAATGCTTGACAGCAGGA
TGGTAAGCTGTAAGAGGTTGGCTGTAACCATCTTGTTTCAGCGGATGGGGAGGGTGTGCC
CTTGGCTTGCAATCTGAAGGTTTATTGAAGATTTCAGAAAGGTCACCTTTCAATTCATCC
ACCGTCTTCATAATCTTTGATTGAAGAGGTTCGCTTGCCCTGAAGCTTTTTGACTGGAAT
GAAGTTCGGGAAGAGTGGAAATCAAGCAAGTCAACTGATACTCCAGGCACTTCTCGGAGA
TCACAAGACCGAGATTGCACCCTTACCAGCTTGCTTTTCTTGCTTGCCGCAGGTTCAGCT
TTGCGTGCTCCAATCTCCTCACATTCTGGCAAATTGCTAGCTAATTCTCTTTCCTCGGAT
GAAGGCATGTTATGCTCTGAGGTATTCAGGCTGCTTTCCCTATCACCATCTTCGTTTATT
TTGCAATCCTCTGAATTCTCTGCGCTTTGCTCTACCGTGTTGTTCTCTTCTTTGTCAGAA
TCTACTATCTGTGTGCCATTCCCACTGCCACTGGGTTGTATAAGGGCAGCAAGATCTTCT
ATTTCTCCATTGGTGTCATCGTCACCAGAATTGTTGTCTTGGCTGCTCTCAGTATTTGGA
ACCTCCATAACATTCTCCTCATCTGACATAATATCACCCTTCTCACTGCTTCCGGTGCCA
TTGCCCTCTTGCTCCATCTCGCTGCTTGAAGCACCAAGAGTGATGGAATCATCCGCAGCA
GCACCAATAGAACCCAGTTCCTTGCTTTGGGGAGACACCCCATTGCTCACAGAGGTAACA
ACAGAGTAATTACCAGAGTCTTGCCGAACTTGTTTTGTCGACACCCCATTGCTCACAGTT
TCAGAGGGAACAACAGAGTAATCCCGGGAATCTTGCTGAACTTGTTTGGTGGCCACATTT
TGTGCATCACTGGCACGGATTTTAGCTGCATAAATGTAAACATACACCAAAACGAACAAT
CAATCCTTTTCCAAAAAGAAAAAGAACAATCAATTCCTTGGAAAGAAATGAGCAAACCGA
CTGGTGCATATCAGCTCATAACGACAAAACCTTGCTAGTTCAGTGTAGCATGGAATTCGT
ACCTCTAAGAGTGGTGTTGCATCCACCGCACTGGTAGACAGAAACATTTGCAGGTTCTGG
TAGAATGTTAAGACACTTTGGGCACCTCACAAGGCGAAACGCGCCTGTGTTTGCACTTGC
CATCAAACAAGAAAGACCAAGGACATCACCCACAGCACAATATTTCCAGGCTGTAGCTAT
CTACCAGCTACCACCAAACTGATATGACTGCTACACTACAGATGTCTTGTCTGTCGTAAC
ACCAGGTCCAGAATCCAGAGTTTCTGTATCTGCAAACATTCAAGAGAAAAATGATCAAAT
TCCAATAGCACCTGGTTGGAGTAATAATAGCATGAAAACCCAACCTGGCTAAAAAATTCA
AAGTCCATTTAAGGTGAATAACATTTATCCGTAGCATGAAACAAATCGGAAGAAACATAA
AGGATAAAGTGCTGGAAAAATAAAGTTACAGCACCACTTACAAATAAGATCAGGTGCTGT
TTGCGTGAAAAACAAGATTGGCAGACAATCCATATTCTCTCCTGCTTAATTAATGAGATG
AGCCAAATCTTTTGCCTCCGTTTAAAAAAAAAACAAGATTGGCTGCTGAACACGAGCAAG
AAATGCAGGGGCAAGATTGCACCACGTACTGCCTTCGCAGTTGGAACATTGAAATCATCA
GTAGGCAATAGGCGTTTTGGCCCATTGGCAAATAGGCAGGAATTTGGCCGATTAGAGAAA
CAAACAAATTCGGAAGGTACCTTTTTTTTCTTTTTGAGGGGACAAATCGGAAGGTACTGA
TTGTTGGGATCCCGTTGTCTTGTTCATCCAGAATTAATCTACTGGGACAAGAACGTAGAG
TACTAATAATGCTCAACTAGAGCTTATTTTGGCATGCTGGTTGGTTGGTAGTAACACGTA
CACTTGCCGAATCCATAAGGGGATCTCCATAGAGAACGGACGGAGAATCTTGCATGTTCG
TAAATCGTACGTTTCTCAGAAGAAGAAGAATCGTATACGCTACTTCTCCCCGACAAGAAT
TATTTAGATACGGAGGAAGTACGTATGGAGCTGCAACCTAGTCCTAGTACAGCGCAAGGA
AAATAAAAAAGATAGAGCAATTCATACCGACTTAATGATCTCTACTAGGAACAAACGCCT
GAAGAGAGTAATCTGGAGAGGAACGCAGCTCGAGACGGAGGAGGTTGAGGAAGAAAAAGA
AAAAAACAGTGGAAAGGCCACCGAATGCCCAAGGTAGAAGAGGAAGAGGAAGAGGAAGAG
GGGAAGAAGCCAAGAAGTCACCTTTCCCGCTCCGTGGCTGCTTCCTCCTCGTTGTTTTGA
ACCACTCTTCTCCAGGAGGGAGGCGCAACAAACACCACAACCTTGCCGTCTCCCGCAGTT
GCAGCTCCAGTTCTGGGAAGTTCCACGCCGGCCCCCGCGCTCACAACTAGTCAGGTCAGG
TCAAGCCTCAAGCGGAGGAGTAGTATATTGTATATACACAACACAGTGGAGGGGGGAGAG
GAAGAGGAGGAGGAGAGTTGACTGGTGGTAGGAAGGAAGGTTTAATTGCCCGGATCCCCG
GTCTGAACGGGGTTGCGCGCAGCGGGGAAGACTTTGGCCGCGCGCTGCCAGCGGAGGGCG
ATAGCGAGAGAGAGAAGAGACAACTCGGGGAGGAAGGGAAGGAGGGAGGGTCCGCGGTCA
AACGCGCGCTCGGGGTATAAATTAACAGCGCAACAGAATTGTTAGAAATTAATTACTATA
TTAATTCAAGGGATGTGTCCAACCCGAATAGTCGTGTCTCCTCTCTCTCTCCATTGCCAA
CAGGCACCTGTTCTGGAGGAATGCCTCCGAACAGGCACCTCTTCTTCGCACCTCTTCCAG
ATGTATATAAACTTGAGAATCAATAGAAATCAGGACTGATCGGTCGTTACTTTCATTCAA
TCTCGTTTTACTCTAACACGTTATCAGCGCGTGACTCTTCGCTGAGAGAGAAAGGCCGGA
AGGACCGACGAGGAGGCCTCTCAAGGACGCCTTCGGCACACCGCGGCGCCCTATCCGTGC
ACAGCGGTGGAGTCTCCCAGCGTTCTCGCATGGACGAGTCGCGCGAGAAACCATGGCCTT
CGGCCTGGTAGTTCTGCGACGGTCGGCGTCGTACCGGCGTACGGAGCGACGGACATCCTT
CACGTGACGCACGGGCTCTCCTGGCTTGCATCGCCATCGACGTCTGCGGGCAGCAATGGC
AAGCCCACCATTCCAACAGCCGATTCCTCCCGTCGGCCGCCCTCGACAAGGCTTTCGCAC
GGCCGCCGCGCCGGCTCCGAGCAGCCCCTGGCCGCGCGCACGTCCATCCGGCCTCTGCGC
CGCGCCCCGATGTGCCTTGCGGCCGTCCGCCCGGTCGTGGCCGCGCCCGGCTGTGCCGTG
GCCGTGTGCGCCTGCTCGCGCCAGGCAGTGGCCTCACTCGCCCGCGCTCGGCTGTGTCGT
GGCCGTGTGCGCCTGCCCGCGCCAAGCCGTGGTCGGCCCCGTGTGCGCCTGCCAGCGCCA
AGCCATGGCCCCGACGAGGAGCTTGGTTTCGAGATGGCTCCCAGCGCGCACGGCCGCCTT
TGCCCCTGACATCGCCTATCAACGCGTCCTTCTGCGGCAAAGCATGCGGCCGCTGGCCGG
CGAGCGAGTGTTCCGGCGGCGTGAGCCCAAACGAATCATTCGATTCGTAACCGCACATGG
AAAGGAGAGAGCCTTATCTCTTCGTGATTATACACTTTAGCCCATGTGGCTTTACCTATT
TTCATAATAGGTTTGTGTGTATATCTCTTCG