Map Locations of contig_158437 (4456 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_158437

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19304 4 1517 bp AK368050 Available Available None





CDS Structure of MLOC_19304






Contig Sequence (4456 bp)

>contig_158437 4456 assembly3_WGSMorex_rbca.fasta
GGTGCCGGCCGTGCCGCGGTCGGCGCAGGTGCTTGCGGAGGAGGTGAGTCGTCGTTGATG
TCTGCTGACGACGGAGCAGCGGCGAGACCCTACGTACGCGGCCGACTCGCCTAACTAGGA
GGTGTGGTTCGCGGTGGAGCACGAGGAGTTGCGTCGTTGTGGCGTGGCGAAGTGCAGCGA
GGAAGCCCTCGGTCGCCCCCGCCTGTCGTCAGCGACGAGGACCAGGAGGCTGAGGCCGCC
TACCAGGCGGCGCTCGCAGCTGTTCTCTGCGACAGCGAGGAGGAAGCGCGGCGCAGGGCC
GACGAGGAGGCGATTACCAGCAGGAGCTCGCGGAGGCCATCTCGCTGTCGGCCGTCAGCG
ACTGTGTCGTGCCACCCCCGCCAAAGCCCGAGCCCACGAAGCCGCGGGAGGTCTACCTGT
GGACCGGCATCATCCACAAGTTCGTCATTGCGCCGCCCATCTGGCTGGGCGCGAGCAAGC
CTACCTCGAGCACTGAAGGGCGGAGCGCGCCGAGGGCCTTCGGCTGATGGAGCTGTAGAA
GGAGGCGGAGGAGGAACGACGGGAGGCAGAGGCGGAGGACCGTGCCCTTGCTACTGCGCT
GCCACCGCCACCAGCACAGCCCACGTCGGCGGGACAGACGACGAAGGCACAGGCAGCTGC
GCTCTGGAACACGGCGTTCCCGTGGGCCGGCCCTGCGCTGGTCGACCTATTCTCACCGTC
CCCGACGAAGCCGCCGACTAGGGTTGTCCTCGTAGTTTTAGGTATTTTTATGTTTAATTA
GTGCAATGCGGATGCTTGGACTCTCGCCGGCCTTTGTGACCGGCTTTTAATGTTTAATTA
TACACTTATGTATTTTTTTTCTTGCACGGTCGTAAAAATGATCCAATCAGCGTTGGACGC
ATGCGTCGATCCATTTACGGAAACGGACGTTCGTGTCCGCCTAGCCGACCCAAACGAACA
AAATCGTTGTCCGTTTGAATCGGCCCGTTAAAGGTGCTCTTAAGCCCTATTATAGGGTTC
TCCAATTTAAAATGCTGATAAGGTGTAGTACATTCATTTAATCGCATGCACGGATCTATT
TGGCCCCCAGAATTCCTCAAACGAGCAAATCAAAAGAAACATATCATACTATTCGATGAG
CAAAAAAAAGAAACATATTCATGTAGCACAACCTCTTCGCATCTTCACACGAACCATGTC
ATACTTATCACGGCAAAACTAACCGTGTTCAGATACAAGTACTCGGCACTAAAACTAAAG
GTTCCCATGGCTTCTTCCTGGGTTTTTAACAAAAAAGGAAACTATACCCATCACCGGTTT
CATTTTAAGTCGAAATGATTGGGCAGTGATATACTGTACAGGAGGGCAACATGGCAAAAA
TTTGGCACCACGCCAATGCTTTCGTTGGGCGCAACACTAAAAAGAATAGCAATGGCTAGA
GAAAAAAAACATATATCTATTGGGTACCGAACTGACAAACCCAAGGCGGAATCATGTGTT
GCTACCAGCACATCCGCTGGCTCAAATCACTACTAATCCAGGGGATGATCGTGAAAGGTA
ATATCAGAATCCATTGCCACTGAAAGGTTGTTGCTGCTCCCCGGAGTGGCTTGATTTCCT
AGGCCTTGTTTGCTTCGGGGTCGAATATGGTGAACTTCCATCGTAAACCCCATGGACACG
TGGTAGACCCGTCGCATCAGAATCCAGGGAATAGCCTCTCTCCACTGTCTCCGCTTCAAG
CGGTATCTCGTCCAAAGTCTGCATCATTGTCAAAGAAACACGGGGTGCAAAACATGTCAG
ATCAAGTATAGTGCATGACATAATTAGATGGAGACCTGAGCAGTTGCGGAAACATACTTT
GTAGGCTTGCTGAAGGACCTTAAGGGTATCACGTATCTGCCTCCTCTTTGTAGTTATTTC
ATCAGGTTCTCTGAGAATGTCCCCAAAGAGCTCCTCTCTGCATTGGTGTATACGAAAATA
TCAATAACCATAGTATACAGCAGCAGCAGCAACTAATTCGACTCTGTTCACCGGACATTA
CTCAAAATTTAAGTAAAGAGTACAAAGTGCCTTCCTCACCTATAAAGGGTAGTTATGAGG
AAATTATGCAGCTCCCTTTTCGTGTGATTAACCTGCAAGACAATCAATCCCTTAAAGAAC
TGAACTAACAAACACAAAATATCAGGTGTTTTACAGCAATCCGCCCAATGCAATCAAACT
CACTAGTAAACAAATGCTTAAAGCAAGAAGGAAATTTAATCATGCTGTAAAAGTCACAAT
AATAAACATGCCCAACAATGTTTGATAATCCTATGGTGTTGAACATTGCTTGGCAGTAAC
TGAGGCCAGAACATTGCTGGGTTTAAGATTTATGTACTGCCCTTCATGTATGCTTACTAT
GCAATTAAGGAAATAGCGCAAAAAGATCATACACAGAAACAGTCATCATACTTATCCAAA
GCAAATATAGGCCGTAAGAAACTTAAGACAAATATGTTGTGCATGCAGAAAAAAAAACTG
CAGTAGGCACTCTCAAGTAAATATTGAGTTACAAGAATCTTACCAGAAAATGCATAATTG
CTTTTGGTACAAAATCCTCGACATTTTTCCTTACTATATTGTAATATGACTGCAGCAGCA
ATTTTGTGATTGCTATTTCAAGATCCTCCTGCTCAGAATGATTTTCTGAAGGCTTGAGGA
CTAGCGGTGGCTGTTTCACAAGGGTCTCCATCAATCACTTAACACGTTCAAATAACACTG
GTAGAAAAACTAAAAGAGCATGAATAAGATAGCTCACCTCTTTTAACTGTATTGAAGAGA
ATGAATGTTCCAGGTTGGGAGTAGCTGAAGCATAAGATTTGTTCGTTGAGCTACCTCTTG
CTGAAGAAGGTGCACGGTCTTCGCTTGAGGTGAATATTGAGCCCCAAAACGAAGTGCTTC
CACTACCTGGAAGATAAGCAGTTTAAGCAAAATGGACTAGGTGAAATTGTACTGTTCCAA
AAGAACACTAAACTGACCTACTGCACTCCAATATAATAGCATATACATAATCAAAAAATA
CATAGCATTTGTAACACTCCTTACCTGAAGATCCTGGTCTCTCTGCCTCAGCAGCCGATC
GTACCCCCTGCTAATAATGACCACAACAGCAAAGGAACATAATCTCAGAAACACTCCACC
AAATCAATAGTAACCTTACTGATTAAAAATAGCGAGGCAAAAAACCTGGATCTGGTCGGT
GATAACTCCATTTACACCAGTAGTTCTACCCAATAATGCACGTGCTTTTTGGGTTTTTTC
AGAAGCCTGTGGCCTATCTGCATCTACTCCATCCTGCAATGTAGTACTGTTACATACTAG
GGTGTACCTCAAAAAATGTGGACTGGCTCAAATTACATATGTAAATTAGTAAGAGAACAT
TCAGTACGTGCATAACTTAGTAAGAGAACAATCATCTGTAAATCAAATCGCTAAAACGTG
CCAAAAATATAGTTTGCATGCCCAAAATCCTTATACAGCACCAGAAGTTCTAACATGTAC
AGTTAAGAGTTGGTGTGGTATCACGCCTTCTCCCAACAATATAAATGGCTGCATGCCCAA
AATCCTTATATAGCACCAGAAGTTCTAACATGTACAGCTAGAGTTGGTGTGGTATCCACG
CCTTCTCCCAACAATATAAATGGTTTGATACTGACATGTTCATGTGATGATTTGCACTGT
CTTGGAGCATAACAGGGTCATCGTGAATTGCATTGAGATCATTACAATGAAAAAATCAAC
ATAGTAGTAACTACTACTCCCTCCGTCCCAAAATAAGTGCCACAGATTTAGTACTAAGTT
AGTACAAATTTTGTACTAGACCAACGACACTTATTTTGGGACAGAGGGAATATTTAAATA
ATTGACAGTTTAGCTATATATTGATAGGAATCTCGACATCGTATATAAGTAACACTCTGC
AAGGCATCACTAATTAACTCTTTTTCTAATTCCAAGTTCTGACAGTACATGTCAGTAAGA
AATGGAAGCAGTCAGATAAAAAATACTAAATTGCAAGGCACCATTTGCATAAATTACTTA
TCTAAAAATTTAAAAAGTATACATACCCTTCTAACCACTGTTGCAGGCAATCTAGCTGCT
CTAACTTGTTGCTGTGCTTGCTCTACAGCCTTGCTGCCACCGATGAAACTTGGGTGAGAT
GTATTTATGTAATCGGCCTGCACAGTCAATATCATCTCAAGTAAAAAATAATGAAAACAG
ACCGGATATCAGTGCAAAGAAGGAATAACAAAGGGAACAAATTATTCAGAGCACAGACTC
GCAATAATTTTGCAAAATAACCAGTTTTGGGGTTATTAAATAAGAGAAACAGAATTGTGG
GGGTGTTTTCATCACTGTATATGGAAGCTCAAATCAAATAGGGTCAATTCTCATACGTGT
TTGTTAGGATAAATAA