Contig Data
morexGenes
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Map Locations of contig_1584148 (3309 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1584148

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19261 1 190 bp MLOC_19261.1 Available Available LOC_Os01g55900.1, FRAME:+2, EVALUE:9e-25, 13101.m05904 protein holliday junction resolvase, putative, expressed





CDS Structure of MLOC_19261






Contig Sequence (3309 bp)

>contig_1584148 3309 assembly3_WGSMorex_rbca.fasta
ATTTACAAGAATGGTTATATTGCATTGCTCTTAATGGATTAATGGAGTAGAGTATTTACA
GTCCATTTACTCAATGTTTGACAATTTGTTGTTGTACATAATACAAACCATCTTGTCGCC
AACAAAGAAGCACTATTAGTAATTCATTGAATTTGAATGTGGACATACTCTGTGCAAGAC
TTGTTAGGACTAGAGCGACATCTGCATGTTGAGGTTGACATAAGTTCAGTTTATGGGAAA
TGACTGTAAACCTTCAATTTTTTTAGGAAAAACTGGTGTTGTGATTTGTAAAATTCCATG
GCACACAATTCTATCATAAGACCTGTTTTGATCACACATCTTCTTTGCCTTCATATTTAT
TATGTGCCATGTAAGTTTTGGATGGTGACAATGACTTTACCATGTTTGATATGTTTCACC
CAAATCGAGAGTAGCTTGACTGAGTATAGTCATGATTGATGTTGCCATTACATTCTTAGT
TTCTTGGATGTGAGCTGCCATCTTAAATCTGCAATTATGTGCTTATTCTAATACTTTTAA
CTTGACAAAATGATCACTATGATAGCCGTAGCCAAGTAGCTTGTCCTTTCCACAATTTGG
CGATGCGTTAGATGATGCACTTGTGTTTCTATAATATAGTAAAGTTACATATTGGGATTG
AAAAGTGCATGGATTATCTCCTATAGTGTCTTGGGTAGGACAAAGACAAACATCAATTTG
ATGGCAGACGATTTCAAAACACTCGTATGTTGGTTATACTTGTTCACATTTAAAACTTAC
TCGTCAACACAAGATCAAGTACACAATAAAAATATCATTAATATTCTGTAATTAATGGTT
TTTCACTCCCACCATCAATTTTTCTAAATAATCTTTGACTAAAGTTGTTTTCGCATTCTG
AAAAGTGAAAACACACATTTTGCTTCTACTCAGTGGGAAAACCAAAAAGGAAATGTGCCC
TTACTGGCATTAAGTTAGGGTTTCAGGTCTTATCTTTATCGACTTCTACTCAAGTTACCC
ACTTCACTTACCTTTCTAAGATATACAAGGGCAGAATTGATAATTAACCACAAACAAATC
AAAATGATTTACCAATAGAAACGGCGTCATATTTGGAAAGGGCGGGTTTTCTCTGTATCT
GGCATACTCTCCTCTGATTGGCTTTAGTGTGTGGATGGCCAAACAACTATTGGTCCCACT
TCACAAAATGCAACTAAAAGATGTCAGGCATGTTATACCGCAATGATGGTACTAACTTGG
AGTGTGATGGCCTCCTGGATGGGTATCACAACTCTTAACTTGAGATTTGTGCATAGAATG
TGGCTGATGCAAGTTTGTTTGAAGCTAATTTATAGATGTGTGTTGGGAGCCATTAAATGC
TTAAACTCGATAGTATTGTCAATCTTATGGCACATCCGGAATAAGAGGAATAGTAGAATC
TTCTATCAAAAAGAAAAGATAGGTTTACCATTTATTTAGTAAGTTCAAGTGAAGACAATC
ATGTGGGTAAAGCATGCACAAATAAAATCAAGGAAATATACACAAATATGTTAATTTTCC
CTTTTTCTTGTGTGAATAAATTTCAATTTTCTTTACTTTTCCTGTTGAATCTCATCAGTT
ATTTTGCAATACTGCACCAAAAAACTCCCAAAAGAACACGTAGGCAAGCTGGCATGTAAC
GTATTAAGGAGCAGTACTGCACCATATTATGCATACATAACACATGTTAGGCTCAGTCTG
CCATCTGGTGTCCTTTCAAGTGTAGTTTTGCTATTAAATCCTCTAATAACTAATTCTCGG
CCTCTTTTTTAGAACCATAACAAAACTTTCTTACTAGAGTTATTAGGGATTCTTATAACT
AACAAGATTTCAACTAACGGTGCAGCACAACAAATCAAACACTCGAAGTAGTGTTTAACC
AGTTTACAAACTTAGTAATTTCTCATTCACTACTTTTTTAGTTGTTCCATATGCTATATT
TTTCCTGATTTCTAACTTCTCTTTAATTTTCAATAATGCACATTGCAGATGCTATCCTCA
GTGCCATTTTTGTTTTGTGAATAGGTTAACAATTACTCCCTTGTCGAGCTTGTTGTTGGT
TATCCATTCAACTTACAGGTTCGATCTTCTCCAGACGTACGGTGCCCTTCTGGTAGCATA
GTTCATCTGGTAGTAAAGTTCACCTCCTCTTTCACTTTATGTTTTCTAATGTTCACTTTT
GTGTAAAGCAGGCATCACAAGTAAGCCTTCTTGTAGGAGAATTTTGTAAAACTAGGAAAC
TTGATGATTTGAGCTACACATATTGGAATGGAATTTTTACCTCAAAGGTGATAGTTCATT
TCCTTCTGTGCATTAAATAGGATAGGGTGTGGACTGTAGTACTTTTTTGGCCATCAGATA
TATTGTATTCTTCTAAGACTGCTATTAGGTTGTTTTGTGGGCAAATGACCGTCATGCCTG
TTTTCAAAGTATTTGGTTGTGGAGTTTTCTGATCGATCTTGCTTTTTCACTCAAACCATG
TTGTATTGATCTTGCCATTGATAATAATTCAGACTTTAGTTTGCACCACCATTGTGTATT
TATGTTCCTAAGAAATTCGTCCTTTTACACATGTGATTATGCACTAGAGTGATTAACAAG
GATGTATTGCATTGTTGCTATACTGGTCTGAAGCACTATGACTTTCGAATCAACCCATAT
GTAATCTTCAATTGGCATTGATGATTCAGACTTTAGGAGATGCGTTTATTGTATATCTGC
TCTTACTATAAAGTGGACAGTAAAACTGAATTCCTTATTTCTTGTAAAATTAGATTGTTA
TATGCTACATAGTAGACCACATATTTTTATCAAGATTATTTGGTCAACATTTTTCAATGT
TGCTTGCTTTTGTGTTTCCAACATTCCGTCCAAGGATACCATGTGTATCTAATCCAGCAG
AAGAAGGAGTAGCTTTATGATGTCATTGCTGAGCACGAGGCCAAATATGTGGTATCCGGG
CGTGACACTTATCTGTTAAACACTTTGTGTACACAAGTCAATGTGGGTACTGATTTTTTT
TATGGTGTACTGATATGTCTCCAACATATCTANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAATAACTTATTAAC
TCAGTGCCAGTTCATGTTTTTCCCATGTTTTGACCCCTTTCATAGGAGGATNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAAAAAGATTTTTTCTGAAACAGAAACAGATCAGGAAG
CCTGAGAAT