Contig Data
morexGenes
Links



Map Locations of contig_1583936 (5117 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1583936

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19213 1 336 bp MLOC_19213.1 Available Available None





CDS Structure of MLOC_19213






Contig Sequence (5117 bp)

>contig_1583936 5117 assembly3_WGSMorex_rbca.fasta
GGAGGCACGCTGCGCCACCGGAATAGACGAAGTGTTAGCTGCAAGACGGGCGTTGTGCCT
AGTTGGAGTGGCTGCAGCACGGCTCTTTGGCGGCGCTGATGGTCTTCTAGCCGGCGTGGC
GAGGATGGCCGGCTCTGTTGCGCGGAAGAGTTCCTAGTGGTGTCTTCCACATCTATCTTT
AGTATTGTTGGGGTTTGCGTCACAGAAATTAGATCCATTCGAAGAAACCATTTTAAATGA
GGGTAGTGCGCCTGGATGAATTAACCACGACTTCTTATGTCTCAAAATATAAAATACCAT
GACTTTTTCCCATGCATATAATACAAGTAGATGGAAATGTCGAAAAACATATACACGTAA
ATGGAGCCGTATGGTCTATGCAAAACGTGTTTATACATGGAGGGTAATCGGACAGGCGAT
CACGGTATAAGCGTGAGCTTGCTCATTCTACACCCTTGCATTACGGAGAGTAACAGGTCA
AAGCTTCTACACGGCTTTCCTGCCGAATTAAGCTTGAAGATATACACGTTGATAGAGTAC
AATGACAGGCATGCATCAATATCAGCATCCGGTATGGTCTCAGCATCACATTTGAATTGA
TCACATGCGTACAAACCAAATTAAATTGGTGTTAAACAAAGGGGCACGATTCATCATCAA
AGAGGGTTTTCAGAGCATTTAGCACGCCTTTTCTCTACGACTCCCATAATAAACAAAAAG
CTGAAACAGTGCATATCCTCGACTAAGCTGAGCTTGGCCCCATGGCCCCCGCGATTTACA
CGCCAATTATGGCGCCATAATTCCGTGATGATTGAACCCCCGCACGCGGTTTTCGTGAAC
AAAGTGCGCGGCTCCAGGACGTGGCGCTTGGACGGCCGCGTGGCGACACAAAATCTGCGC
GTCATTCATCCGCGCAGGAGTCCGTCCGGAGCCGGTTTCGGTCCACAGCAGGCAGCGGCG
GCAGCATGGGCGCGCGGCTGGACCCGTTCCTGCTGCTTTCTTTGACGGACCATCCCAACA
TCAGATCACAAGACAGCGCACGCACGTACGGGCTGGATCAGAAAGTTTTTTGTTTCGCTG
AACAAGCACAGCAATGTGTGATTTCATTTTTTCGCTGTGCATGTGCTGTGATCTTTAATT
ACCTTTTCAAGGTGGCTGTTATAAATCTGTCGTCTGATTTGTACGTCCGATTGAACGAGC
CCTCATCGTCAGATTAAATTCCCGACATGGACCAGAGGCCGCGTGGTGCTCCAATACAGC
ACCGACAGCGTCCGACGAACTCCATTGCAACTTCGAGAAACTCCATTGCAGCCGGTGAAG
CACCAACACAGCACCGATGCTCCGACGAAGCTCCATTACAACTCCGGCGAAGCTTCAACG
CAGCACAGACGCGTCCGCGAAAAGCTTCATTGCAGTTCCGGCGTAGCTTCAACGCAACAA
GGCATGTCCGACGAAGCTCCATTACAACTCCGACGAGTCTTCATTGCAGCCCGTCGTTGC
ACCATTGCAGCTAAGGCGATGCTCCCAATAGCTTGAAGGCAACATCATCGGAGTTGCAGC
GCCCACGTCGGCCCTCGTCGCGGTCGTCGTTGCAAAAGCGCGTCACTGGAGTGTGAGCTT
GGCATCGGGTGCTGCAAAAGCCGCCCCGCGGGCTGGTGCGACGAGGACCGGGGTGATGAG
GAGAGGCGAAGCATGGGGATGGAGGTAGAAGACGAAGTAGAAATAAATCTGGCTCTAGGA
GGGGAAGAGATAAGGTTGGGAGTAAAAAAAAGAAACATGAAAGGCAACATGTGGGTGTCT
CGCGTGGTGCGTGGATCACGACGCGTGGCGTGCGGAAGACCCGACTGATTTGCAGAGAAA
TCAGCCGGTTGATTCTAAACGTTTTTCATAGTAAAAATGCCCATGCGTTACATCGGAGGA
AAAAGACACAACTTGCATAATGTGTCATTGCGCATCATTTTTCATTTTCAATTTAATAAA
TGTTAATAATAATGTAAAATGTGGAAATTTTTGCACAAACTCATCTCACTTATGTTCCCC
ATTAAGGGTGTGTTTGATTTACTCGGTAGCTTCACGTTGCATCGCATGAGGGATCCATGA
TGAACATGACCGTTGACTTGATGCAAAGATGAGAAGAGACGAGTGTTTGGTGAACATGCA
TGAGATGGCTGCACGAGATGGGGAACGGAGATCAAGCGGCAGCGCGGGGCGGCAGGATCC
GCGATCGGCGCTCCAGATGAAGGGGCCTGGCATGCAGTGGCGCTCGGTGGCGGAATCCAG
CGTGTGGCTACGCGAACCGGTAGGATCCGACTCGCAGTGACTTGACCACGGCAGCGACGG
CGATTGGTCGGGGACGACGGCGACGACGCTTAGGAGAGGATAGTGGCGGCGACGCTTGGT
CGTGGACGGCGACGACGCTTGGTGGAGGACGCACGAGGACAGCGGCGCTTGAAGAGGACA
GCGGCGGCGCCTTGTCTATGCGGCTGCTCCGGAGCAAAGTCAGAAGAAGAGAGGGGAAAA
CGAGCGAGCCTGCACGCGAGCTACGCTAGTAACGTACGTTTCCCTGAACCTGACTGAGAG
GCCTAGTTTTGCATTCATAGGGCCATGCTGAAAAGTCCATACAGTCTACCAAACAACTAA
GTTATGCATGATGGATACAAGCCACATGCAGGAAACCAAACACCCCTAAAAGAATCCTGC
CATGAGGTGGCTCTGTCGGAAAATTCAGTCTCCAATTTCTTTCATTTTGCTTTTTCTAAT
CCTCCTTTTGTTCTTTTATTTTCTTTTTTGTAATTTCTTAAAATATTTTCAAATTTATGA
TTTCCCGCTGTCATTGGAATCATACATAGCTAGCCGCATGAACCATGGACACAGATGATC
AAGAAGCGACGAAGCCTTCAGTTACTTCACTCGGTTGGAAGAATTGTGGTTAGATCGGGT
GGGGTGCTAGGATGACTGAGTGCCTTTTTATTAGTCTTGATTGATGCATAATTGTAACCT
TCAATGTGAATCTTGGAAAGAAACTTCTTGTTTGCTCTCATAAAGCATGAATATTTCTCT
GTATCTATCTTTCAGACTATGCATATTATGAATTTGGAGAACTTGAGGTACCTTTGTGAG
TCTGGATCACCTCACAACAGTGATTGAAAGGGACACTCGCAGGCTTGGTAGGATAGCATT
ATCTTAACATTTATACTAAATTGGCTTAAGAGGCATAGCCAGCTCATTGACATTGGGTTC
AAGTGAACCCAACAAAAATTGTTAGTATATTTCTATGAAAAATCACACTTCTCTAACACA
ATAACCATGGCTCAAGACCCCAATAAGTTCTCATAACTAATTTCAACACATGGCTTTCTA
TTTGTGTTGCCACTTATCCTTCTTTCTATCCTTACTGATTCTGGTCTTAATGCTCACACA
ATCACACCACATTGGAATGTTGTTAATCCTAAGACGTCTTTCTCTCGACAAGATGAGAAA
TCTTAAGAAAGACACATGATGCACTATTGATTAAGTTTGCATTCTAGATTACATTTTTTA
AATAGTTAACATGTAAAATAGCATTAAATTAAAATTCTACATATTTTCCTAATCAAGTTT
CTTAAATTTAGAGTTTGAGTTAGGGTCCTGCAAAAATACTGGAGTTAGGGTTAAAAAGAT
ATGATATTATTTGATATGTAGTGCCGGTTGATTAACCCAAAGATCACACTGTTTACTGTA
TAAGCGAAAATCCGACTTAAAATTGGGTTGCGTCCAAAAATGTCATATGGGGTTTTCTGC
GAAAACGAAACCTGACTTAAAACTAGAGTGTGGGTTGATTACGAGAAATATCTCGGGGTT
TTCTATAAAATAGCATGACGGGCCAAAAATATATATTTTCTTTATTAATAGATATAGATT
TTTGAGTGGTTCGAGCATGTACAACCGGCTCCTTGAATGCTCCATGTGCATTTAGACAGA
TGACCTCTCAATCGAACTACCTCTCATATGAGCCATTTTTGCCTCAACTCACCAACATCA
CTCATACCCAATCCATAATTTTTTTGAACCCCTCATATACATCCCATATTTGGGATGAAT
ATAGAAGCCTGCATGCGCTCGTCACGTCTGATTCGGCACGCGCTGGCCCCACGATCCCAC
ATATATTCGTTTGTGTCCACATCTCACACGATAGCCTAACCACTCCACTTTGCCCCAAAC
TTCGTTCCGGTGATCTCCGACCTTCTCCGACATGATGGGCAGCGAATCCAACTTCAAGCT
CTCCTGATCCATCGACCGAGACCTCATCCACTAGGAGGATATAGCCGTTCGCATGTCTCT
CTACCGCTCACGGCAGGAGTGTGTCCGATCGCCGTCACACTAGGTAACCGATGGGGTCCA
TTGCGTCGATGCTAATGTCGCTCGGATCCATCGGGGCTGGTGGATCAAGGCACGTGAACG
CGACCTTGTTGGACGTAGTTGTTAGAGCATATTTCTCCATATGTGGTTTTGATAATTNNN
GACAATCCCTATGGACTAATGGTTACTTTCAGTTATATTTGAAGGATTTGTCCATNNNCA
CTTCTTGAAGTCCATCTGTTGGCAAAGTTGTCAGAATTGCGACTCAAGTCTTAGGATCTT
ATGATATTACGATCCAAACTAGGCTCTCCGATTCTACGATTCTGCTCATAGAACCTAAGT
TTCTACGATCCTGATAGTTATTATTCTATGATTTACGATCCTAGCAATGGAGCTCTGATC
CGATTCAGAATTTTGTGTGTTGGTTTCAAGGAGTTTATATGATGACCAGGGTGGTATTCG
AGGTTTTATCCAAAGATTGGGCATAAAGACACAAGGTTGATCAAGACTAAGACTAAGAGT
GAATCAAGTTGATCAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCC
ATGGTATGGTAAGCATTGTTCAATATACTTTGCGTACTAACCCATGGCCTTCGTTAGAGT
TCTATGCGGGGTCAGGTGTGTTTTCATGGGCTTGCATCAAGAGGAATATCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTCATCATCAAGATTGCAGTGTGCAAAGTTCAAGTG
GAGCATCACGGAGATAT